Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_009_A16
(276 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P30652|YOW6_CAEEL Hypothetical protein ZK643.6 precursor 48 8e-06
sp|Q29116|TENA_PIG Tenascin precursor (TN) (Hexabrachion) (... 37 0.019
sp|P54190|TES26_TOXCA 26 kDa secreted antigen precursor (To... 35 0.070
sp|Q19673|TYR3_CAEEL Putative tyrosinase-like protein tyr-3... 35 0.070
sp|P10039|TENA_CHICK Tenascin precursor (TN) (Hexabrachion)... 34 0.092
sp|Q09662|YS51_CAEEL Hypothetical protein ZK673.1 in chromo... 34 0.12
sp|Q05546|TENR_RAT Tenascin-R precursor (TN-R) (Restrictin)... 33 0.16
sp|Q8BYI9|TENR_MOUSE Tenascin-R precursor (TN-R) (Restricti... 33 0.16
sp|P24821|TENA_HUMAN Tenascin precursor (TN) (Hexabrachion)... 33 0.16
sp|P22105|TENX_HUMAN Tenascin-X precursor (TN-X) (Hexabrach... 33 0.20
>sp|P30652|YOW6_CAEEL Hypothetical protein ZK643.6 precursor
Length = 180
Score = 47.8 bits (112), Expect = 8e-06
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Frame = +1
Query: 31 TDSGDDCSSKTGEDCTLEE----VYTKCPKSCHFCGDCADSRPDCDVLKERGDCDKMD-D 195
TD +DCS C+++E ++ CPK+C+ C C D+ C + RG C K D D
Sbjct: 108 TDLANDCSYNQNR-CSVKEYSSLMHRLCPKTCNACNICEDANKMCPIWVPRGFCSKFDHD 166
Query: 196 RV---CRKTCGHC 225
+V C K+C C
Sbjct: 167 KVQKSCAKSCNIC 179
>sp|Q29116|TENA_PIG Tenascin precursor (TN) (Hexabrachion) (Cytotactin) (Neuronectin)
(GMEM) (JI) (Miotendinous antigen)
(Glioma-associated-extracellular matrix antigen) (GP
150-225) (Tenascin-C) (TN-C) (P230)
Length = 1746
Score = 36.6 bits (83), Expect = 0.019
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = +1
Query: 58 KTGEDCTLEEVYTKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTC---GHC 225
+TGEDC+ +CP CH G C R +C+ + DC +M C C G C
Sbjct: 429 RTGEDCS----QLRCPNDCHGRGRCVQGRCECEHGFQGYDCSEMS---CPHDCHQHGRC 480
Score = 34.3 bits (77), Expect = 0.092
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +1
Query: 64 GEDCTLEEVYTKCPKSCHFCGDCADSRPDCDVLKERGDCDKM 189
G DC+ +CP CH G C D R +CD E DC ++
Sbjct: 369 GADCSER----RCPSDCHNRGRCLDGRCECDDGFEGEDCGEL 406
Score = 29.3 bits (64), Expect = 3.0
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +1
Query: 64 GEDCTLEEVYTKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTC 216
G +C+ E CP +CH G C D + C+ DC ++ C C
Sbjct: 182 GPNCSEPE----CPSNCHLRGQCVDGQCVCNEGFTGEDCSQL---ACPSDC 225
Score = 28.9 bits (63), Expect = 3.9
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 9/49 (18%)
Frame = +1
Query: 61 TGEDCTLEEVYTKCPKSCHFCGDCADSR---------PDCDVLKERGDC 180
TGEDC +CP C G C D R PDC L DC
Sbjct: 492 TGEDCR----ELRCPGDCSQRGRCVDGRCVCEHGFAGPDCADLACPSDC 536
Score = 28.5 bits (62), Expect = 5.0
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +1
Query: 61 TGEDCTLEEVYTKCPKSCHFCGDCADSRPDCDVLKERGDCDKM 189
TGEDC CPK C G C + CD E DC ++
Sbjct: 306 TGEDCG----ELICPKDCFDRGRCINGTCYCDEGFEGEDCGRL 344
Score = 28.1 bits (61), Expect = 6.6
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Frame = +1
Query: 64 GEDCTLEEVYTKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTC---GHC 225
GEDC C +CH G C ++ CD DC ++ +C K C G C
Sbjct: 276 GEDCN----EPLCLHNCHGRGRCVENECVCDEGFTGEDCGEL---ICPKDCFDRGRC 325
Score = 28.1 bits (61), Expect = 6.6
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = +1
Query: 61 TGEDCTLEEVYTKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTCGH 222
TG+DC +CP CH G C D + C DC + R C C +
Sbjct: 554 TGKDCGQR----RCPGDCHGQGRCVDGQCVCHEGFTGLDCGQ---RSCPNDCSN 600
>sp|P54190|TES26_TOXCA 26 kDa secreted antigen precursor (Toxocara excretory-secretory
antigen 26) (TES-26)
Length = 262
Score = 34.7 bits (78), Expect = 0.070
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Frame = +1
Query: 34 DSGDDCSSKTGEDCTL---EEVYTKCPKSCHFCGDCADSRPDCDV---LKERGDCDKMDD 195
DS DC++ G T + + +C ++C+ C DC D +C L + + +
Sbjct: 25 DSASDCAANAGSCFTRPVSQVLQNRCQRTCNTC-DCRDEANNCAASINLCQNPTFEPLVR 83
Query: 196 RVCRKTCGHC 225
C+KTCG C
Sbjct: 84 DRCQKTCGLC 93
>sp|Q19673|TYR3_CAEEL Putative tyrosinase-like protein tyr-3 precursor
Length = 683
Score = 34.7 bits (78), Expect = 0.070
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 8/51 (15%)
Frame = +1
Query: 97 KCPKSCHFC------GDCADSRPDCDVLKERGDC--DKMDDRVCRKTCGHC 225
+C SC C G CAD DC RG+C +K CR++C C
Sbjct: 607 QCKVSCGVCRPNYVYGPCADYHYDCAAWARRGECLKNKWMPENCRRSCNTC 657
Score = 29.6 bits (65), Expect = 2.3
Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 12/64 (18%)
Frame = +1
Query: 70 DCTLEEVYTK--CPKSCHFCG-------DCADSRPDCDVLKERGDCDKMD---DRVCRKT 213
+C VY C SC C +C+D +C + G+C+K CR +
Sbjct: 477 ECQKNPVYMNVWCKASCRQCTPNYNINEECSDRHTNCAMWSRSGECNKNPLWMSENCRSS 536
Query: 214 CGHC 225
C C
Sbjct: 537 CQKC 540
>sp|P10039|TENA_CHICK Tenascin precursor (TN) (Hexabrachion) (Cytotactin) (Neuronectin)
(GMEM) (JI) (Miotendinous antigen)
(Glioma-associated-extracellular matrix antigen) (GP
150-225)
Length = 1808
Score = 34.3 bits (77), Expect = 0.092
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +1
Query: 61 TGEDCTLEEVYTKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTC---GHC 225
TGEDC CP +CH G C D+ CD DC ++ +C C G C
Sbjct: 276 TGEDCN----EPLCPNNCHNRGRCVDNECVCDEGYTGEDCGEL---ICPNDCFDRGRC 326
Score = 32.3 bits (72), Expect = 0.35
Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Frame = +1
Query: 61 TGEDCTLEEVYTKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTC---GHC 225
TGEDC +CP CH G C + R CD DC ++ C C G C
Sbjct: 493 TGEDCG----ELRCPNDCHNRGRCVEGRCVCDNGFMGEDCGELS---CPNDCHQHGRC 543
Score = 32.0 bits (71), Expect = 0.46
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 9/56 (16%)
Frame = +1
Query: 40 GDDCSSKTGEDCTLEEVYTKCPKSCHFCGDCADSR---------PDCDVLKERGDC 180
GDDCS K +CPK C+ G C D R DC L+ DC
Sbjct: 370 GDDCSQK------------RCPKDCNNRGHCVDGRCVCHEGYLGEDCGELRCPNDC 413
Score = 29.6 bits (65), Expect = 2.3
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +1
Query: 64 GEDCTLEEVYTKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTCGH 222
GEDC CP CH G C D R C DC +R C C +
Sbjct: 525 GEDCG----ELSCPNDCHQHGRCVDGRCVCHEGFTGEDC---RERSCPNDCNN 570
>sp|Q09662|YS51_CAEEL Hypothetical protein ZK673.1 in chromosome II precursor
Length = 154
Score = 33.9 bits (76), Expect = 0.12
Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 14/56 (25%)
Frame = +1
Query: 100 CPKSCHFCG--------DCADSRPDCDVLKERGDCDKM------DDRVCRKTCGHC 225
CPK+C FCG C DS +C ++ G C + C KTC C
Sbjct: 95 CPKTCGFCGGGSTAAPVQCVDSSTNCANWEKNGFCSSTFYDCANKKQYCAKTCKLC 150
>sp|Q05546|TENR_RAT Tenascin-R precursor (TN-R) (Restrictin) (Janusin) (Neural
recognition molecule J1-160/180)
Length = 1356
Score = 33.5 bits (75), Expect = 0.16
Identities = 24/73 (32%), Positives = 29/73 (39%), Gaps = 13/73 (17%)
Frame = +1
Query: 46 DCSSK---TGEDCTLEEVYT-------KCPKSCHFCGDCADSRPDCDVLKERGDCDKMDD 195
DCSS+ +C EE YT +CP C G CA+ C DC +
Sbjct: 238 DCSSRGLCVDGECVCEEPYTGEDCRELRCPGDCSGKGQCANGTCLCQEGYAGEDCSQ--- 294
Query: 196 RVCRKTC---GHC 225
R C C GHC
Sbjct: 295 RRCLNACSGRGHC 307
>sp|Q8BYI9|TENR_MOUSE Tenascin-R precursor (TN-R) (Restrictin) (Janusin) (Neural
recognition molecule J1-160/180)
Length = 1358
Score = 33.5 bits (75), Expect = 0.16
Identities = 24/73 (32%), Positives = 29/73 (39%), Gaps = 13/73 (17%)
Frame = +1
Query: 46 DCSSK---TGEDCTLEEVYT-------KCPKSCHFCGDCADSRPDCDVLKERGDCDKMDD 195
DCSS+ +C EE YT +CP C G CA+ C DC +
Sbjct: 238 DCSSRGLCVDGECVCEEPYTGEDCRELRCPGDCSGKGQCANGTCLCQEGYAGEDCSQ--- 294
Query: 196 RVCRKTC---GHC 225
R C C GHC
Sbjct: 295 RRCLNACSGRGHC 307
>sp|P24821|TENA_HUMAN Tenascin precursor (TN) (Hexabrachion) (Cytotactin) (Neuronectin)
(GMEM) (JI) (Miotendinous antigen)
(Glioma-associated-extracellular matrix antigen) (GP
150-225) (Tenascin-C) (TN-C)
Length = 2201
Score = 33.5 bits (75), Expect = 0.16
Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = +1
Query: 37 SGDDCSSKTGEDCTLEEVYTKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTC 216
+G DCS K +CP CH G C D R +CD DC ++ C C
Sbjct: 368 AGLDCSEK------------RCPADCHNRGRCVDGRCECDDGFTGADCGELK---CPNGC 412
Query: 217 -GH 222
GH
Sbjct: 413 SGH 415
Score = 33.5 bits (75), Expect = 0.16
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +1
Query: 61 TGEDCTLEEVYTKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTC---GHC 225
TGEDC+ +CP CH G C + + C+ + DC M C C G C
Sbjct: 430 TGEDCS----QLRCPNDCHSRGRCVEGKCVCEQGFKGYDCSDMS---CPNDCHQHGRC 480
Score = 28.9 bits (63), Expect = 3.9
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +1
Query: 64 GEDCTLEEVYTKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTC 216
G +C+ E CP +CH G C D + CD DC ++ C C
Sbjct: 182 GPNCSEPE----CPGNCHLRGRCIDGQCICDDGFTGEDCSQL---ACPSDC 225
Score = 28.9 bits (63), Expect = 3.9
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Frame = +1
Query: 61 TGEDCTLEEVYTKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTC---GHC 225
TGEDC CP +CH G C + + CD DC ++ C C G C
Sbjct: 337 TGEDCGKPT----CPHACHTQGRCEEGQCVCDEGFAGLDC---SEKRCPADCHNRGRC 387
Score = 28.5 bits (62), Expect = 5.0
Identities = 17/53 (32%), Positives = 21/53 (39%)
Frame = +1
Query: 64 GEDCTLEEVYTKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTCGH 222
G DC+ CP CH G C + CD DC DR C + C +
Sbjct: 462 GYDCS----DMSCPNDCHQHGRCVNGMCVCDDGYTGEDC---RDRQCPRDCSN 507
Score = 28.5 bits (62), Expect = 5.0
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 9/49 (18%)
Frame = +1
Query: 61 TGEDCTLEEVYTKCPKSCHFCGDCADSR---------PDCDVLKERGDC 180
TGEDC + CP+ C G C D + PDC L DC
Sbjct: 492 TGEDCRDRQ----CPRDCSNRGLCVDGQCVCEDGFTGPDCAELSCPNDC 536
>sp|P22105|TENX_HUMAN Tenascin-X precursor (TN-X) (Hexabrachion-like protein)
Length = 4289
Score = 33.1 bits (74), Expect = 0.20
Identities = 20/53 (37%), Positives = 22/53 (41%)
Frame = +1
Query: 61 TGEDCTLEEVYTKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTCG 219
TGEDC + CP+ C G C D R CD DC R C CG
Sbjct: 302 TGEDCGVRS----CPRGCSQRGRCKDGRCVCDPGYTGEDC---GTRSCPWDCG 347
Score = 31.2 bits (69), Expect = 0.78
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +1
Query: 61 TGEDCTLEEVYTKCPKSCHFCGDCADSRPDCDVLKERGDC 180
TGEDC+ CP+ C G C D CD DC
Sbjct: 364 TGEDCSTRT----CPRDCRGRGRCEDGECICDTGYSGDDC 399
Score = 28.5 bits (62), Expect = 5.0
Identities = 19/60 (31%), Positives = 23/60 (38%), Gaps = 12/60 (20%)
Frame = +1
Query: 61 TGEDCTLEEVYTKCPKSCHFCGDCADSR---------PDCDVLKERGDCDK---MDDRVC 204
+GEDC+ CP C G C D R DC V + DC + D VC
Sbjct: 550 SGEDCSTRS----CPGGCRGRGQCLDGRCVCEDGYSGEDCGVRQCPNDCSQHGVCQDGVC 605
Score = 28.5 bits (62), Expect = 5.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 67 EDCTLEEVYTKCPKSCHFCGDCADSRPDCD 156
EDC++ CP +CH G C + R CD
Sbjct: 614 EDCSIRT----CPSNCHGRGRCEEGRCLCD 639
Score = 27.7 bits (60), Expect = 8.6
Identities = 20/66 (30%), Positives = 24/66 (36%), Gaps = 3/66 (4%)
Frame = +1
Query: 37 SGDDCSSKTGEDCTLEEVYTKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTC 216
SG DCS ++ CP+ C G C R CD DC R C + C
Sbjct: 240 SGPDCSQRS------------CPRGCSQRGRCEGGRCVCDPGYTGDDCGM---RSCPRGC 284
Query: 217 ---GHC 225
G C
Sbjct: 285 SQRGRC 290
Score = 27.7 bits (60), Expect = 8.6
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Frame = +1
Query: 61 TGEDCTLEEVYTKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTC---GHC 225
TG+DC + CP+ C G C + R C+ DC R C + C G C
Sbjct: 271 TGDDCGMRS----CPRGCSQRGRCENGRCVCNPGYTGEDCGV---RSCPRGCSQRGRC 321
Score = 27.7 bits (60), Expect = 8.6
Identities = 20/58 (34%), Positives = 21/58 (36%), Gaps = 3/58 (5%)
Frame = +1
Query: 61 TGEDCTLEEVYTKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTC---GHC 225
TGEDC CP C G C D R C DC R C + C G C
Sbjct: 333 TGEDCGTRS----CPWDCGEGGRCVDGRCVCWPGYTGEDC---STRTCPRDCRGRGRC 383
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,933,588
Number of Sequences: 369166
Number of extensions: 545067
Number of successful extensions: 1897
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1895
length of database: 68,354,980
effective HSP length: 61
effective length of database: 57,086,145
effective search space used: 1712584350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)