Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_008_O14
(807 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q8R5C5|ACTY_MOUSE Beta-centractin (Actin-related protein... 406 e-113
sp|P42025|ACTY_HUMAN Beta-centractin (Actin-related protein... 405 e-113
sp|P61164|ACTZ_MOUSE Alpha-centractin (Centractin) (Centros... 398 e-111
sp|P45889|ACTZ_DROME Actin-like protein 87C 383 e-106
sp|P42023|ACTZ_PNECA Actin-2 (Actin II) (Centractin-like pr... 320 4e-87
sp|P38673|ACTZ_NEUCR Actin-like protein (Centractin) 298 2e-80
sp|P10365|ACT_THELA Actin 294 2e-79
sp|P02578|ACT1_ACACA Actin-1 294 2e-79
sp|P53498|ACT_CHLRE Actin 293 5e-79
sp|P53496|ACT11_ARATH Actin-11 292 6e-79
>sp|Q8R5C5|ACTY_MOUSE Beta-centractin (Actin-related protein 1B) (ARP1B)
Length = 376
Score = 406 bits (1043), Expect = e-113
Identities = 196/252 (77%), Positives = 226/252 (89%)
Frame = +3
Query: 3 KAAEIFFETFNVPALYISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFALQHAIMR 182
KAAE+FFETFNVPAL+ISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFA+ H+IMR
Sbjct: 123 KAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMR 182
Query: 183 TDIAGRDVSRYLRLLLRKEGTHFQTSAEFEIVRQLKEKACFLSANPEMQEQSEIDNTTYP 362
DIAGRDVSRYLRLLLRKEG F TSAEFE+VR +KE+AC+LS NP+ E E + Y
Sbjct: 183 VDIAGRDVSRYLRLLLRKEGADFHTSAEFEVVRTIKERACYLSINPQKDEALETEKVQYT 242
Query: 363 LPDGSKLRIGGAKFRAPELLFRPDLIGSECDGIHEVLAYSIQKSDMDLRQILYGNIVLSG 542
LPDGS L +G A+FRAPELLF+PDL+G E +G+HEVLA++I KSDMDLR+ L+ NIVLSG
Sbjct: 243 LPDGSTLDVGPARFRAPELLFQPDLVGDESEGLHEVLAFAIHKSDMDLRRTLFSNIVLSG 302
Query: 543 GSTLFKGFGDRILSELKKLAPKDNKIRISAPQERLYSTWIGGSILASLDTFRRMWISKRE 722
GSTLFKGFGDR+LSE+KKLAPKD KI+ISAPQERLYSTWIGGSILASLDTF++MW+SK+E
Sbjct: 303 GSTLFKGFGDRLLSEVKKLAPKDVKIKISAPQERLYSTWIGGSILASLDTFKKMWVSKKE 362
Query: 723 FEDDGYRALHRK 758
+E+DG RA+HRK
Sbjct: 363 YEEDGSRAIHRK 374
>sp|P42025|ACTY_HUMAN Beta-centractin (Actin-related protein 1B) (ARP1B)
Length = 376
Score = 405 bits (1040), Expect = e-113
Identities = 195/252 (77%), Positives = 226/252 (89%)
Frame = +3
Query: 3 KAAEIFFETFNVPALYISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFALQHAIMR 182
KAAE+FFETFNVPAL+ISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFA+ H+IMR
Sbjct: 123 KAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMR 182
Query: 183 TDIAGRDVSRYLRLLLRKEGTHFQTSAEFEIVRQLKEKACFLSANPEMQEQSEIDNTTYP 362
DIAGRDVSRYLRLLLRKEG F TSAEFE+VR +KE+AC+LS NP+ E E + Y
Sbjct: 183 VDIAGRDVSRYLRLLLRKEGVDFHTSAEFEVVRTIKERACYLSINPQKDEALETEKVQYT 242
Query: 363 LPDGSKLRIGGAKFRAPELLFRPDLIGSECDGIHEVLAYSIQKSDMDLRQILYGNIVLSG 542
LPDGS L +G A+FRAPELLF+PDL+G E +G+HEV+A++I KSDMDLR+ L+ NIVLSG
Sbjct: 243 LPDGSTLDVGPARFRAPELLFQPDLVGDESEGLHEVVAFAIHKSDMDLRRTLFANIVLSG 302
Query: 543 GSTLFKGFGDRILSELKKLAPKDNKIRISAPQERLYSTWIGGSILASLDTFRRMWISKRE 722
GSTLFKGFGDR+LSE+KKLAPKD KI+ISAPQERLYSTWIGGSILASLDTF++MW+SK+E
Sbjct: 303 GSTLFKGFGDRLLSEVKKLAPKDIKIKISAPQERLYSTWIGGSILASLDTFKKMWVSKKE 362
Query: 723 FEDDGYRALHRK 758
+E+DG RA+HRK
Sbjct: 363 YEEDGSRAIHRK 374
>sp|P61164|ACTZ_MOUSE Alpha-centractin (Centractin) (Centrosome-associated actin homolog)
(Actin-RPV) (ARP1)
sp|P61163|ACTZ_HUMAN Alpha-centractin (Centractin) (Centrosome-associated actin homolog)
(Actin-RPV) (ARP1)
sp|P61162|ACTZ_CANFA Alpha-centractin (Centractin) (Centrosome-associated actin homolog)
(Actin-RPV) (ARP1)
Length = 376
Score = 398 bits (1023), Expect = e-111
Identities = 193/252 (76%), Positives = 225/252 (89%)
Frame = +3
Query: 3 KAAEIFFETFNVPALYISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFALQHAIMR 182
+AAE+FFETFNVPAL+ISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFA+ H+IMR
Sbjct: 123 RAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMR 182
Query: 183 TDIAGRDVSRYLRLLLRKEGTHFQTSAEFEIVRQLKEKACFLSANPEMQEQSEIDNTTYP 362
DIAGRDVSR+LRL LRKEG F +S+EFEIV+ +KE+AC+LS NP+ E E + Y
Sbjct: 183 IDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKDETLETEKAQYY 242
Query: 363 LPDGSKLRIGGAKFRAPELLFRPDLIGSECDGIHEVLAYSIQKSDMDLRQILYGNIVLSG 542
LPDGS + IG ++FRAPELLFRPDLIG E +GIHEVL ++IQKSDMDLR+ L+ NIVLSG
Sbjct: 243 LPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSG 302
Query: 543 GSTLFKGFGDRILSELKKLAPKDNKIRISAPQERLYSTWIGGSILASLDTFRRMWISKRE 722
GSTLFKGFGDR+LSE+KKLAPKD KIRISAPQERLYSTWIGGSILASLDTF++MW+SK+E
Sbjct: 303 GSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKE 362
Query: 723 FEDDGYRALHRK 758
+E+DG R++HRK
Sbjct: 363 YEEDGARSIHRK 374
>sp|P45889|ACTZ_DROME Actin-like protein 87C
Length = 376
Score = 383 bits (984), Expect = e-106
Identities = 183/252 (72%), Positives = 220/252 (87%)
Frame = +3
Query: 3 KAAEIFFETFNVPALYISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFALQHAIMR 182
KAAE FFE N PAL++SMQAVLSLYATGR TGVVLDSGDGVTHAVPIYEGFA+ H+IMR
Sbjct: 123 KAAEFFFEGINAPALFVSMQAVLSLYATGRVTGVVLDSGDGVTHAVPIYEGFAMPHSIMR 182
Query: 183 TDIAGRDVSRYLRLLLRKEGTHFQTSAEFEIVRQLKEKACFLSANPEMQEQSEIDNTTYP 362
DIAGRDV+RYL+ L+R+EG +F+++AEFEIVR +KEK C+L+ NP+ +E E + Y
Sbjct: 183 VDIAGRDVTRYLKTLIRREGFNFRSTAEFEIVRSIKEKVCYLATNPQKEETVETEKFAYK 242
Query: 363 LPDGSKLRIGGAKFRAPELLFRPDLIGSECDGIHEVLAYSIQKSDMDLRQILYGNIVLSG 542
LPDG IG A+FRAPE+LFRPDL+G EC+GIH+VL YSI+KSDMDLR++LY NIVLSG
Sbjct: 243 LPDGKIFEIGPARFRAPEVLFRPDLLGEECEGIHDVLMYSIEKSDMDLRKMLYQNIVLSG 302
Query: 543 GSTLFKGFGDRILSELKKLAPKDNKIRISAPQERLYSTWIGGSILASLDTFRRMWISKRE 722
GSTLFKGFGDR+LSELKK + KD KIRI+APQERLYSTW+GGSILASLDTF++MWISKRE
Sbjct: 303 GSTLFKGFGDRLLSELKKHSAKDLKIRIAAPQERLYSTWMGGSILASLDTFKKMWISKRE 362
Query: 723 FEDDGYRALHRK 758
+E++G +A+HRK
Sbjct: 363 YEEEGQKAVHRK 374
>sp|P42023|ACTZ_PNECA Actin-2 (Actin II) (Centractin-like protein)
Length = 385
Score = 320 bits (819), Expect = 4e-87
Identities = 163/263 (61%), Positives = 207/263 (78%), Gaps = 11/263 (4%)
Frame = +3
Query: 3 KAAEIFFETFNVPALYISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFALQHAIMR 182
+AA++FFETFNVPAL+ S+QAVLSLYA+GRTTGVVLDSGDGVTHAVPIYEGFA+ AI R
Sbjct: 122 QAAQVFFETFNVPALFTSIQAVLSLYASGRTTGVVLDSGDGVTHAVPIYEGFAMPSAIRR 181
Query: 183 TDIAGRDVSRYLRLLLRKEGTHFQTSAEFEIVRQLKEKACFLSANPEMQEQSEIDNTT-- 356
DIAGRDV+ YL+LLLRK GT F TSAE EIVR +KEK +++ +P +E+ I+ +
Sbjct: 182 IDIAGRDVTEYLQLLLRKSGTIFHTSAEKEIVRIIKEKCSYVTLDPRKEEKEWINASISG 241
Query: 357 ---------YPLPDGSKLRIGGAKFRAPELLFRPDLIGSECDGIHEVLAYSIQKSDMDLR 509
+ LPDG+ LR+G +FRAPE+LF P++IGSE GIH+V+ +I + D+DLR
Sbjct: 242 GKDYTKEEEFKLPDGNVLRLGAERFRAPEILFDPEIIGSEYSGIHQVVVDAISRVDLDLR 301
Query: 510 QILYGNIVLSGGSTLFKGFGDRILSELKKLAPKDNKIRISAPQERLYSTWIGGSILASLD 689
+ L+GNIVLSGGSTL +GFGDR+LSE+++LA KD KI+I AP ER YSTWIGGSILASL
Sbjct: 302 KSLFGNIVLSGGSTLTRGFGDRLLSEIRRLAVKDVKIKIFAPPERKYSTWIGGSILASLS 361
Query: 690 TFRRMWISKREFEDDGYRALHRK 758
TFR+MW+S E+++D +HRK
Sbjct: 362 TFRKMWVSAEEYQEDP-DIIHRK 383
>sp|P38673|ACTZ_NEUCR Actin-like protein (Centractin)
Length = 380
Score = 298 bits (762), Expect = 2e-80
Identities = 148/250 (59%), Positives = 197/250 (78%), Gaps = 7/250 (2%)
Frame = +3
Query: 6 AAEIFFETFNVPALYISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFALQHAIMRT 185
AA+I FETFNVPALY S+QAVLSLYA+GRTTGVVLDSGDGV+HAVP+Y+GF + ++I R
Sbjct: 122 AAQILFETFNVPALYTSIQAVLSLYASGRTTGVVLDSGDGVSHAVPVYQGFTVPNSIRRI 181
Query: 186 DIAGRDVSRYLRLLLRKEGTHFQTSAEFEIVRQLKEKACFLSANPEMQEQ----SEIDNT 353
D+AGRDV+ YL+ LLRK G F TSAE E+VR +KE +++ +P +E+ +++D
Sbjct: 182 DVAGRDVTEYLQTLLRKSGYVFHTSAEKEVVRLIKESVTYVAHDPRKEEKEWAAAKMDPA 241
Query: 354 T---YPLPDGSKLRIGGAKFRAPELLFRPDLIGSECDGIHEVLAYSIQKSDMDLRQILYG 524
Y LPDG+KL+IG +FRAPE+LF P++IG E G+H+++ SI ++D+DLR+ LY
Sbjct: 242 KIAEYVLPDGNKLKIGAERFRAPEILFDPEIIGLEYPGVHQIVVDSINRTDLDLRRDLYS 301
Query: 525 NIVLSGGSTLFKGFGDRILSELKKLAPKDNKIRISAPQERLYSTWIGGSILASLDTFRRM 704
NIVLSGGSTL KGFGDR+L+E++KLA KD +I+I AP ER YSTWIGGSILA L TFR+M
Sbjct: 302 NIVLSGGSTLTKGFGDRLLTEVQKLAVKDMRIKIFAPPERKYSTWIGGSILAGLSTFRKM 361
Query: 705 WISKREFEDD 734
W+S ++ ++
Sbjct: 362 WVSIDDWHEN 371
>sp|P10365|ACT_THELA Actin
Length = 375
Score = 294 bits (753), Expect = 2e-79
Identities = 147/256 (57%), Positives = 187/256 (73%), Gaps = 4/256 (1%)
Frame = +3
Query: 3 KAAEIFFETFNVPALYISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFALQHAIMR 182
K +I FETFN PA Y+S+QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEGFAL HAI R
Sbjct: 118 KMTQIVFETFNAPAFYVSIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGFALTHAISR 177
Query: 183 TDIAGRDVSRYLRLLLRKEGTHFQTSAEFEIVRQLKEKACFLSANPEMQEQSEIDNTT-- 356
DIAGRD++ YL +L + G F T+AE EIVR +KEK C+++ + E + Q+ ++T
Sbjct: 178 IDIAGRDLTDYLMKILAERGYSFTTTAEREIVRDIKEKLCYVAFDFEQELQTAAQSSTLE 237
Query: 357 --YPLPDGSKLRIGGAKFRAPELLFRPDLIGSECDGIHEVLAYSIQKSDMDLRQILYGNI 530
Y LPDG + IG +FRAPE LF P ++G E GIHE SI K D+D+R+ LYGNI
Sbjct: 238 KSYELPDGQVITIGNERFRAPEALFNPAVLGHESGGIHETTFNSIIKCDVDVRKDLYGNI 297
Query: 531 VLSGGSTLFKGFGDRILSELKKLAPKDNKIRISAPQERLYSTWIGGSILASLDTFRRMWI 710
V+SGG+T++ G DR+ EL LAP KI+I AP ER YS WIGGSILASL TF++MW+
Sbjct: 298 VMSGGTTMYPGIADRMQKELTALAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWV 357
Query: 711 SKREFEDDGYRALHRK 758
SK+E+++ G +HRK
Sbjct: 358 SKQEYDESGPSIVHRK 373
>sp|P02578|ACT1_ACACA Actin-1
Length = 375
Score = 294 bits (752), Expect = 2e-79
Identities = 144/256 (56%), Positives = 187/256 (73%), Gaps = 4/256 (1%)
Frame = +3
Query: 3 KAAEIFFETFNVPALYISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFALQHAIMR 182
K +I FETFN PA+Y+++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+AL HAI+R
Sbjct: 118 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILR 177
Query: 183 TDIAGRDVSRYLRLLLRKEGTHFQTSAEFEIVRQLKEKACFLSANPEMQEQSEIDNT--- 353
D+AGRD++ YL +L + G F T+AE EIVR +KEK C+++ + E + + ++
Sbjct: 178 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMHTAASSSALE 237
Query: 354 -TYPLPDGSKLRIGGAKFRAPELLFRPDLIGSECDGIHEVLAYSIQKSDMDLRQILYGNI 530
+Y LPDG + IG +FRAPE LF+P +G E GIHE SI K D+D+R+ LYGN+
Sbjct: 238 KSYELPDGQVITIGNERFRAPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNV 297
Query: 531 VLSGGSTLFKGFGDRILSELKKLAPKDNKIRISAPQERLYSTWIGGSILASLDTFRRMWI 710
VLSGG+T+F G DR+ EL LAP KI+I AP ER YS WIGGSILASL TF++MWI
Sbjct: 298 VLSGGTTMFPGIADRMQKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 357
Query: 711 SKREFEDDGYRALHRK 758
SK E+++ G +HRK
Sbjct: 358 SKEEYDESGPSIVHRK 373
>sp|P53498|ACT_CHLRE Actin
Length = 377
Score = 293 bits (749), Expect = 5e-79
Identities = 142/256 (55%), Positives = 189/256 (73%), Gaps = 4/256 (1%)
Frame = +3
Query: 3 KAAEIFFETFNVPALYISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFALQHAIMR 182
K +I FETFNVPA+Y+++QAVLSLYA+GRTTG+VLDSGDGVTH VPIYEG+AL HAI+R
Sbjct: 120 KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILR 179
Query: 183 TDIAGRDVSRYLRLLLRKEGTHFQTSAEFEIVRQLKEKACFLSANPEMQEQSEIDNT--- 353
D+AGRD++ YL +L + G F T+AE EIVR +KEK C+++ + E + + + ++
Sbjct: 180 LDLAGRDLTDYLMKILMERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATALSSSALE 239
Query: 354 -TYPLPDGSKLRIGGAKFRAPELLFRPDLIGSECDGIHEVLAYSIQKSDMDLRQILYGNI 530
TY LPDG + IG +FR PE+LF P++IG E GIH+ SI K D+D+R+ LY NI
Sbjct: 240 KTYELPDGQMITIGNERFRCPEVLFNPNMIGMEAVGIHDTTFNSIMKCDVDIRKDLYNNI 299
Query: 531 VLSGGSTLFKGFGDRILSELKKLAPKDNKIRISAPQERLYSTWIGGSILASLDTFRRMWI 710
VLSGG+T+F G DR+ E+ LAP KI++ AP ER YS WIGGSILASL TF++MWI
Sbjct: 300 VLSGGTTMFPGIADRMSKEITALAPSAMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 359
Query: 711 SKREFEDDGYRALHRK 758
+K E+++ G +HRK
Sbjct: 360 AKSEYDESGPSIVHRK 375
>sp|P53496|ACT11_ARATH Actin-11
Length = 377
Score = 292 bits (748), Expect = 6e-79
Identities = 145/258 (56%), Positives = 189/258 (73%), Gaps = 6/258 (2%)
Frame = +3
Query: 3 KAAEIFFETFNVPALYISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFALQHAIMR 182
K +I FETFN PA+Y+++QAVLSLYA+GRTTG+VLDSGDGV+H VPIYEG+AL HAI+R
Sbjct: 120 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 179
Query: 183 TDIAGRDVSRYLRLLLRKEGTHFQTSAEFEIVRQLKEKACFLSANPEMQEQSEIDNTT-- 356
D+AGRD++ YL +L + G F TSAE EIVR +KEK +++ + E ++ E NT+
Sbjct: 180 LDLAGRDLTDYLMKILTERGYSFTTSAEREIVRDVKEKLAYIALDYE--QEMETANTSSS 237
Query: 357 ----YPLPDGSKLRIGGAKFRAPELLFRPDLIGSECDGIHEVLAYSIQKSDMDLRQILYG 524
Y LPDG + IGG +FR PE+LF+P L+G E GIHE SI K D+D+R+ LYG
Sbjct: 238 VEKSYELPDGQVITIGGERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYG 297
Query: 525 NIVLSGGSTLFKGFGDRILSELKKLAPKDNKIRISAPQERLYSTWIGGSILASLDTFRRM 704
NIVLSGG+T+F G DR+ E+ LAP KI++ AP ER YS WIGGSILASL TF++M
Sbjct: 298 NIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM 357
Query: 705 WISKREFEDDGYRALHRK 758
WI+K E+++ G +HRK
Sbjct: 358 WIAKAEYDESGPSIVHRK 375
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,411,167
Number of Sequences: 369166
Number of extensions: 2392727
Number of successful extensions: 6764
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6399
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7666799535
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)