Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_008_O08
(617 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P42918|CRTC2_BOVIN Calreticulin, brain isoform 2 precurs... 184 2e-46
sp|P52193|CRTC1_BOVIN Calreticulin, brain isoform 1 precurs... 184 2e-46
sp|P27797|CRTC_HUMAN Calreticulin precursor (CRP55) (Calreg... 181 1e-45
sp|P18418|CRTC_RAT Calreticulin precursor (CRP55) (Calregul... 180 3e-45
sp|P14211|CRTC_MOUSE Calreticulin precursor (CRP55) (Calreg... 180 3e-45
sp|Q8K3H7|CRTC_CRIGR Calreticulin precursor (CRP55) (Calreg... 180 3e-45
sp|P15253|CRTC_RABIT Calreticulin precursor (CRP55) (Calreg... 178 9e-45
sp|P11012|RAL1_ONCVO RAL-1 protein precursor (RAL1 antigen)... 171 1e-42
sp|P29413|CRTC_DROME Calreticulin precursor (CRP55) (Calreg... 168 1e-41
sp|P27798|CRTC_CAEEL Calreticulin precursor 166 6e-41
>sp|P42918|CRTC2_BOVIN Calreticulin, brain isoform 2 precursor (CRP55) (Calregulin)
(HACBP)
Length = 421
Score = 184 bits (466), Expect = 2e-46
Identities = 78/112 (69%), Positives = 93/112 (83%)
Frame = +1
Query: 1 EYWDDEMDGEWEAPQIDNPEYKGEWKPKQIDNPKYKGPWIHPEIDNPDYKPESNLYLYKN 180
E WD+EMDGEWE P I NPEYKGEWKP+QIDNP+YKG WIHPEIDNP+Y P+SN+Y Y+N
Sbjct: 255 EDWDEEMDGEWEPPLIQNPEYKGEWKPRQIDNPEYKGIWIHPEIDNPEYSPDSNIYAYEN 314
Query: 181 IGSIGFDLWQVKSGTIFDNILLTDDPAYAKKYVEKTWKETAAGEKKMKDKQD 336
+G DLWQVKSGTIFDN L+T+D AYA+++ +TW T A EK+MKDKQD
Sbjct: 315 FAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQMKDKQD 366
>sp|P52193|CRTC1_BOVIN Calreticulin, brain isoform 1 precursor (CRP55) (Calregulin)
(HACBP)
Length = 417
Score = 184 bits (466), Expect = 2e-46
Identities = 78/112 (69%), Positives = 93/112 (83%)
Frame = +1
Query: 1 EYWDDEMDGEWEAPQIDNPEYKGEWKPKQIDNPKYKGPWIHPEIDNPDYKPESNLYLYKN 180
E WD+EMDGEWE P I NPEYKGEWKP+QIDNP+YKG WIHPEIDNP+Y P+SN+Y Y+N
Sbjct: 251 EDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPEYKGIWIHPEIDNPEYSPDSNIYAYEN 310
Query: 181 IGSIGFDLWQVKSGTIFDNILLTDDPAYAKKYVEKTWKETAAGEKKMKDKQD 336
+G DLWQVKSGTIFDN L+T+D AYA+++ +TW T A EK+MKDKQD
Sbjct: 311 FAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQMKDKQD 362
>sp|P27797|CRTC_HUMAN Calreticulin precursor (CRP55) (Calregulin) (HACBP) (ERp60) (grp60)
Length = 417
Score = 181 bits (460), Expect = 1e-45
Identities = 77/112 (68%), Positives = 91/112 (81%)
Frame = +1
Query: 1 EYWDDEMDGEWEAPQIDNPEYKGEWKPKQIDNPKYKGPWIHPEIDNPDYKPESNLYLYKN 180
E WD+EMDGEWE P I NPEYKGEWKP+QIDNP YKG WIHPEIDNP+Y P+ ++Y Y N
Sbjct: 251 EDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDN 310
Query: 181 IGSIGFDLWQVKSGTIFDNILLTDDPAYAKKYVEKTWKETAAGEKKMKDKQD 336
G +G DLWQVKSGTIFDN L+T+D AYA+++ +TW T A EK+MKDKQD
Sbjct: 311 FGVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQMKDKQD 362
>sp|P18418|CRTC_RAT Calreticulin precursor (CRP55) (Calregulin) (HACBP) (ERp60) (CALBP)
(Calcium-binding protein 3) (CABP3)
Length = 416
Score = 180 bits (456), Expect = 3e-45
Identities = 76/112 (67%), Positives = 91/112 (81%)
Frame = +1
Query: 1 EYWDDEMDGEWEAPQIDNPEYKGEWKPKQIDNPKYKGPWIHPEIDNPDYKPESNLYLYKN 180
E WD+EMDGEWE P I NPEYKGEWKP+QIDNP YKG WIHPEIDNP+Y P++N+Y Y +
Sbjct: 251 EDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDANIYAYDS 310
Query: 181 IGSIGFDLWQVKSGTIFDNILLTDDPAYAKKYVEKTWKETAAGEKKMKDKQD 336
+G DLWQVKSGTIFDN L+T+D AYA+++ +TW T A EK+MKDKQD
Sbjct: 311 FAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQMKDKQD 362
>sp|P14211|CRTC_MOUSE Calreticulin precursor (CRP55) (Calregulin) (HACBP) (ERp60)
Length = 416
Score = 180 bits (456), Expect = 3e-45
Identities = 76/112 (67%), Positives = 91/112 (81%)
Frame = +1
Query: 1 EYWDDEMDGEWEAPQIDNPEYKGEWKPKQIDNPKYKGPWIHPEIDNPDYKPESNLYLYKN 180
E WD+EMDGEWE P I NPEYKGEWKP+QIDNP YKG WIHPEIDNP+Y P++N+Y Y +
Sbjct: 251 EDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDANIYAYDS 310
Query: 181 IGSIGFDLWQVKSGTIFDNILLTDDPAYAKKYVEKTWKETAAGEKKMKDKQD 336
+G DLWQVKSGTIFDN L+T+D AYA+++ +TW T A EK+MKDKQD
Sbjct: 311 FAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQMKDKQD 362
>sp|Q8K3H7|CRTC_CRIGR Calreticulin precursor (CRP55) (Calregulin) (HACBP) (ERp60)
Length = 417
Score = 180 bits (456), Expect = 3e-45
Identities = 76/112 (67%), Positives = 91/112 (81%)
Frame = +1
Query: 1 EYWDDEMDGEWEAPQIDNPEYKGEWKPKQIDNPKYKGPWIHPEIDNPDYKPESNLYLYKN 180
E WD+EMDGEWE P I NPEYKGEWKP+QIDNP YKG WIHPEIDNP+Y P++N+Y Y +
Sbjct: 251 EDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDANIYAYDS 310
Query: 181 IGSIGFDLWQVKSGTIFDNILLTDDPAYAKKYVEKTWKETAAGEKKMKDKQD 336
+G DLWQVKSGTIFDN L+T+D AYA+++ +TW T A EK+MKDKQD
Sbjct: 311 FAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKASEKQMKDKQD 362
>sp|P15253|CRTC_RABIT Calreticulin precursor (CRP55) (Calregulin) (HACBP) (ERp60)
Length = 418
Score = 178 bits (452), Expect = 9e-45
Identities = 75/112 (66%), Positives = 90/112 (80%)
Frame = +1
Query: 1 EYWDDEMDGEWEAPQIDNPEYKGEWKPKQIDNPKYKGPWIHPEIDNPDYKPESNLYLYKN 180
E WD+EMDGEWE P I NPEYKGEWKP+QIDNP YKG WIHPEIDNP+Y P++N+Y Y +
Sbjct: 251 EDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDANIYAYDS 310
Query: 181 IGSIGFDLWQVKSGTIFDNILLTDDPAYAKKYVEKTWKETAAGEKKMKDKQD 336
+G DLWQVKSGTIFDN L+T+D AYA+++ +TW T EK+MKDKQD
Sbjct: 311 FAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKTAEKQMKDKQD 362
>sp|P11012|RAL1_ONCVO RAL-1 protein precursor (RAL1 antigen) (41 kDa larval antigen)
Length = 388
Score = 171 bits (433), Expect = 1e-42
Identities = 76/110 (69%), Positives = 87/110 (79%)
Frame = +1
Query: 1 EYWDDEMDGEWEAPQIDNPEYKGEWKPKQIDNPKYKGPWIHPEIDNPDYKPESNLYLYKN 180
E WDDEMDGEWE P +DNPEYKGEWKPKQ NP YKG WIHPEI+ PDY P+ NLY+Y +
Sbjct: 249 EDWDDEMDGEWEPPMVDNPEYKGEWKPKQKKNPAYKGKWIHPEIEIPDYTPDDNLYVYDD 308
Query: 181 IGSIGFDLWQVKSGTIFDNILLTDDPAYAKKYVEKTWKETAAGEKKMKDK 330
IG+IGFDLWQVKSGTIFD++++TD AKK+ EKT K T GEKK K
Sbjct: 309 IGAIGFDLWQVKSGTIFDDVIVTDSVEEAKKFGEKTLKITREGEKKKGKK 358
>sp|P29413|CRTC_DROME Calreticulin precursor (CRP55) (Calregulin) (HACBP)
Length = 406
Score = 168 bits (425), Expect = 1e-41
Identities = 76/112 (67%), Positives = 87/112 (77%)
Frame = +1
Query: 1 EYWDDEMDGEWEAPQIDNPEYKGEWKPKQIDNPKYKGPWIHPEIDNPDYKPESNLYLYKN 180
E WDDEMDGEWE P IDNPE+KGEW+PKQ+DNP YKG W HPEI NP+Y P+ LYL K
Sbjct: 251 EDWDDEMDGEWEPPMIDNPEFKGEWQPKQLDNPNYKGAWEHPEIANPEYVPDDKLYLRKE 310
Query: 181 IGSIGFDLWQVKSGTIFDNILLTDDPAYAKKYVEKTWKETAAGEKKMKDKQD 336
I ++GFDLWQVKSGTIFDN+L+TDD A K + K T AGEKKMK+ QD
Sbjct: 311 ICTLGFDLWQVKSGTIFDNVLITDDVELAAKAAAEV-KNTQAGEKKMKEAQD 361
>sp|P27798|CRTC_CAEEL Calreticulin precursor
Length = 395
Score = 166 bits (419), Expect = 6e-41
Identities = 72/112 (64%), Positives = 87/112 (77%)
Frame = +1
Query: 1 EYWDDEMDGEWEAPQIDNPEYKGEWKPKQIDNPKYKGPWIHPEIDNPDYKPESNLYLYKN 180
E WDDEMDGEWE P IDNPEYKGEWKPKQI NP YKG WIHPEI+NP+Y P+ LY Y++
Sbjct: 246 EDWDDEMDGEWEPPMIDNPEYKGEWKPKQIKNPAYKGKWIHPEIENPEYTPDDELYSYES 305
Query: 181 IGSIGFDLWQVKSGTIFDNILLTDDPAYAKKYVEKTWKETAAGEKKMKDKQD 336
G+IGFDLWQVKSGTIFDNI++TD A+ + +T+ + EK+ K+K D
Sbjct: 306 WGAIGFDLWQVKSGTIFDNIIITDSVEEAEAHAAETFDKLKTVEKEKKEKAD 357
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,022,192
Number of Sequences: 369166
Number of extensions: 987801
Number of successful extensions: 3462
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3309
length of database: 68,354,980
effective HSP length: 105
effective length of database: 48,957,805
effective search space used: 4895780500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)