Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_008_M19-2
(210 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9JTW1|G6P1_NEIMA Glucose-6-phosphate isomerase 1 (GPI 1... 56 2e-08
sp|Q5F8P8|G6PI1_NEIG1 Glucose-6-phosphate isomerase 1 (GPI ... 55 5e-08
sp|Q9JYX3|G6PI1_NEIMB Glucose-6-phosphate isomerase 1 (GPI ... 55 7e-08
sp|Q7MZB4|G6PI_PHOLL Glucose-6-phosphate isomerase (GPI) (P... 53 2e-07
sp|Q8UI94|G6PI_AGRT5 Glucose-6-phosphate isomerase (GPI) (P... 52 3e-07
sp|P08059|G6PI_PIG Glucose-6-phosphate isomerase (GPI) (Pho... 52 3e-07
sp|P0A6T1|G6PI_ECOLI Glucose-6-phosphate isomerase (GPI) (P... 52 4e-07
sp|Q8FB44|G6PI_ECOL6 Glucose-6-phosphate isomerase (GPI) (P... 52 4e-07
sp|Q6D022|G6PI_ERWCT Glucose-6-phosphate isomerase (GPI) (P... 52 6e-07
sp|P06744|G6PI_HUMAN Glucose-6-phosphate isomerase (GPI) (P... 51 7e-07
>sp|Q9JTW1|G6P1_NEIMA Glucose-6-phosphate isomerase 1 (GPI 1) (Phosphoglucose isomerase
1) (PGI 1) (Phosphohexose isomerase 1) (PHI 1)
Length = 548
Score = 56.2 bits (134), Expect = 2e-08
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 12/66 (18%)
Frame = +3
Query: 48 KKINFTENRSVLHIALRNRSNNPILVD------------QV*GNLLNQFTKDYFLGHTGK 191
KKIN TENR+VLH+ALRNR+N+PI+VD Q G ++ +LG+T +
Sbjct: 83 KKINTTENRAVLHVALRNRTNSPIVVDGEDVMPKVNRVLQRMGEFAHEVRSGSWLGYTNQ 142
Query: 192 MITDVV 209
+ITDVV
Sbjct: 143 VITDVV 148
>sp|Q5F8P8|G6PI1_NEIG1 Glucose-6-phosphate isomerase 1 (GPI 1) (Phosphoglucose isomerase
1) (PGI 1) (Phosphohexose isomerase 1) (PHI 1)
Length = 548
Score = 55.1 bits (131), Expect = 5e-08
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 12/66 (18%)
Frame = +3
Query: 48 KKINFTENRSVLHIALRNRSNNPILVD------------QV*GNLLNQFTKDYFLGHTGK 191
+KIN TENR+VLH+ALRNR+N+PI+VD Q G ++ +LG+T +
Sbjct: 83 EKINTTENRAVLHVALRNRTNSPIMVDGEDVMPKVNRVLQRMGEFAHEVRSGSWLGYTNQ 142
Query: 192 MITDVV 209
+ITDVV
Sbjct: 143 VITDVV 148
>sp|Q9JYX3|G6PI1_NEIMB Glucose-6-phosphate isomerase 1 (GPI 1) (Phosphoglucose isomerase
1) (PGI 1) (Phosphohexose isomerase 1) (PHI 1)
Length = 548
Score = 54.7 bits (130), Expect = 7e-08
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 12/66 (18%)
Frame = +3
Query: 48 KKINFTENRSVLHIALRNRSNNPILVD------------QV*GNLLNQFTKDYFLGHTGK 191
+KIN TENR+VLH+ALRNR+N+PI+VD Q G ++ +LG+T +
Sbjct: 83 EKINTTENRAVLHVALRNRTNSPIVVDGEDVMPKVNRVLQRMGEFAHEVRSGSWLGYTNQ 142
Query: 192 MITDVV 209
+ITDVV
Sbjct: 143 VITDVV 148
>sp|Q7MZB4|G6PI_PHOLL Glucose-6-phosphate isomerase (GPI) (Phosphoglucose isomerase)
(PGI) (Phosphohexose isomerase) (PHI)
Length = 548
Score = 52.8 bits (125), Expect = 2e-07
Identities = 35/68 (51%), Positives = 43/68 (63%), Gaps = 14/68 (20%)
Frame = +3
Query: 48 KKINFTENRSVLHIALRNRSNNPILVD------QV*GNLLNQFTKDY--------FLGHT 185
+KIN TENR+VLHIALRNRSN P++VD QV N + KD+ + G+T
Sbjct: 86 EKINCTENRAVLHIALRNRSNTPMMVDGEDVMQQV--NAVLAKMKDFSERVIHGEWKGYT 143
Query: 186 GKMITDVV 209
GK ITDVV
Sbjct: 144 GKGITDVV 151
>sp|Q8UI94|G6PI_AGRT5 Glucose-6-phosphate isomerase (GPI) (Phosphoglucose isomerase)
(PGI) (Phosphohexose isomerase) (PHI)
Length = 541
Score = 52.4 bits (124), Expect = 3e-07
Identities = 31/66 (46%), Positives = 35/66 (53%), Gaps = 12/66 (18%)
Frame = +3
Query: 48 KKINFTENRSVLHIALRNRSNNPILVDQ------------V*GNLLNQFTKDYFLGHTGK 191
K INFTE+R+VLH ALRNRSN P+LVD G + G TGK
Sbjct: 78 KAINFTEDRAVLHTALRNRSNTPVLVDDKDVMPDVNGVLAAMGKFADAIRSGSLKGATGK 137
Query: 192 MITDVV 209
ITDVV
Sbjct: 138 KITDVV 143
>sp|P08059|G6PI_PIG Glucose-6-phosphate isomerase (GPI) (Phosphoglucose isomerase)
(PGI) (Phosphohexose isomerase) (PHI)
Length = 558
Score = 52.4 bits (124), Expect = 3e-07
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 12/66 (18%)
Frame = +3
Query: 48 KKINFTENRSVLHIALRNRSNNPILVD------------QV*GNLLNQFTKDYFLGHTGK 191
+KINFTE+R+VLH+ALRNRSN PILVD + + + + G++GK
Sbjct: 88 EKINFTEDRAVLHVALRNRSNTPILVDGKDVMPEVNRVLEKMKSFCKRVRSGEWKGYSGK 147
Query: 192 MITDVV 209
ITDV+
Sbjct: 148 SITDVI 153
>sp|P0A6T1|G6PI_ECOLI Glucose-6-phosphate isomerase (GPI) (Phosphoglucose isomerase)
(PGI) (Phosphohexose isomerase) (PHI)
sp|P0A6T2|G6PI_ECO57 Glucose-6-phosphate isomerase (GPI) (Phosphoglucose isomerase)
(PGI) (Phosphohexose isomerase) (PHI)
Length = 549
Score = 52.0 bits (123), Expect = 4e-07
Identities = 34/66 (51%), Positives = 40/66 (60%), Gaps = 12/66 (18%)
Frame = +3
Query: 48 KKINFTENRSVLHIALRNRSNNPILVD------QV*GNLLNQFT------KDYFLGHTGK 191
+KIN TENR+VLH+ALRNRSN PILVD +V L T + G+TGK
Sbjct: 86 EKINRTENRAVLHVALRNRSNTPILVDGKDVMPEVNAVLEKMKTFSEAIISGEWKGYTGK 145
Query: 192 MITDVV 209
ITDVV
Sbjct: 146 AITDVV 151
>sp|Q8FB44|G6PI_ECOL6 Glucose-6-phosphate isomerase (GPI) (Phosphoglucose isomerase)
(PGI) (Phosphohexose isomerase) (PHI)
Length = 549
Score = 52.0 bits (123), Expect = 4e-07
Identities = 34/66 (51%), Positives = 40/66 (60%), Gaps = 12/66 (18%)
Frame = +3
Query: 48 KKINFTENRSVLHIALRNRSNNPILVD------QV*GNLLNQFT------KDYFLGHTGK 191
+KIN TENR+VLH+ALRNRSN PILVD +V L T + G+TGK
Sbjct: 86 EKINRTENRAVLHVALRNRSNTPILVDGKDVMPEVNAVLEKMKTFSEAIISGEWKGYTGK 145
Query: 192 MITDVV 209
ITDVV
Sbjct: 146 AITDVV 151
>sp|Q6D022|G6PI_ERWCT Glucose-6-phosphate isomerase (GPI) (Phosphoglucose isomerase)
(PGI) (Phosphohexose isomerase) (PHI)
Length = 549
Score = 51.6 bits (122), Expect = 6e-07
Identities = 33/66 (50%), Positives = 41/66 (62%), Gaps = 12/66 (18%)
Frame = +3
Query: 48 KKINFTENRSVLHIALRNRSNNPILVD----QV*GNLLNQFTKDY--------FLGHTGK 191
+KIN TE+R+VLH+ALRNRSN PILVD N + KD+ + G+TGK
Sbjct: 86 EKINRTEDRAVLHVALRNRSNTPILVDGKDVMPEVNAVLAKMKDFSERVIGGEWKGYTGK 145
Query: 192 MITDVV 209
ITDVV
Sbjct: 146 TITDVV 151
>sp|P06744|G6PI_HUMAN Glucose-6-phosphate isomerase (GPI) (Phosphoglucose isomerase)
(PGI) (Phosphohexose isomerase) (PHI) (Neuroleukin)
(NLK) (Sperm antigen 36) (SA-36)
Length = 558
Score = 51.2 bits (121), Expect = 7e-07
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 12/66 (18%)
Frame = +3
Query: 48 KKINFTENRSVLHIALRNRSNNPILVD------------QV*GNLLNQFTKDYFLGHTGK 191
+KIN+TE R+VLH+ALRNRSN PILVD + + + G+TGK
Sbjct: 88 EKINYTEGRAVLHVALRNRSNTPILVDGKDVMPEVNKVLDKMKSFCQRVRSGDWKGYTGK 147
Query: 192 MITDVV 209
ITDV+
Sbjct: 148 TITDVI 153
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,718,892
Number of Sequences: 369166
Number of extensions: 338472
Number of successful extensions: 834
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 68,354,980
effective HSP length: 41
effective length of database: 60,780,845
effective search space used: 1701863660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)