Planarian EST Database


Dr_sW_008_M19-1

BLASTX 2.2.12 [Aug-07-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dr_sW_008_M19-1
         (520 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8TFN0|NDK_EMENI  Nucleoside diphosphate kinase (NDK) (ND...   157   1e-38
sp|P27950|NDK_GINCI  Nucleoside diphosphate kinase (NDK) (ND...   157   1e-38
sp|Q50KA9|NDKA_CANFA  Nucleoside diphosphate kinase A (NDK A...   151   1e-36
sp|P19804|NDKB_RAT  Nucleoside diphosphate kinase B (NDK B) ...   149   3e-36
sp|P15531|NDKA_HUMAN  Nucleoside diphosphate kinase A (NDK A...   148   9e-36
sp|P15532|NDKA_MOUSE  Nucleoside diphosphate kinase A (NDK A...   147   1e-35
sp|P52175|NDKB_BOVIN  Nucleoside diphosphate kinase NBR-B (N...   147   2e-35
sp|Q01768|NDKB_MOUSE  Nucleoside diphosphate kinase B (NDK B...   146   3e-35
sp|Q05982|NDKA_RAT  Nucleoside diphosphate kinase A (NDK A) ...   146   3e-35
sp|P52174|NDKA_BOVIN  Nucleoside diphosphate kinase NBR-A (N...   146   3e-35
>sp|Q8TFN0|NDK_EMENI Nucleoside diphosphate kinase (NDK) (NDP kinase) (AnNDK)
          Length = 153

 Score =  157 bits (398), Expect = 1e-38
 Identities = 72/116 (62%), Positives = 90/116 (77%)
 Frame = +1

Query: 115 AIKMMQPDKKLLEVHYQELKDKPFFPKLIEYMLSGPVVCMVWQGYEMVKIGRALLGATRP 294
           A+K+  P + LLE HY +LK+KPFFP L+ YMLSGP+V MVW+G ++VK GR +LGAT P
Sbjct: 36  AMKLTSPSRSLLEQHYSDLKEKPFFPGLVTYMLSGPIVAMVWEGKDVVKTGRTILGATNP 95

Query: 295 IDSLPGTIRGDFAQVAGRNIVHGSDSVESAKREIGLWFTAKDLGEYKLCADIWVQE 462
           + S PGTIRGDFA   GRN+ HGSDSVESAK+EIGLWFT +++  YKL A  W+ E
Sbjct: 96  LASAPGTIRGDFAIDVGRNVCHGSDSVESAKKEIGLWFTPEEIQNYKLNAFGWIYE 151

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 22/35 (62%), Positives = 27/35 (77%)
 Frame = +3

Query: 18  ERSYIMVKPVGVQRG*VGTIITRFEQRGFKLICNK 122
           E+++I +KP GVQRG VG II+RFE RGFKL   K
Sbjct: 4   EQTFIAIKPDGVQRGLVGPIISRFENRGFKLAAMK 38
>sp|P27950|NDK_GINCI Nucleoside diphosphate kinase (NDK) (NDP kinase)
          Length = 151

 Score =  157 bits (397), Expect = 1e-38
 Identities = 74/116 (63%), Positives = 87/116 (75%)
 Frame = +1

Query: 115 AIKMMQPDKKLLEVHYQELKDKPFFPKLIEYMLSGPVVCMVWQGYEMVKIGRALLGATRP 294
           A+K +Q  K LLE HY EL DKPF+PKLI+YM SGPVV MVW+G  +VK GR +LG T P
Sbjct: 36  AMKFLQAPKDLLEKHYCELSDKPFYPKLIKYMSSGPVVAMVWEGLNVVKTGRVMLGETNP 95

Query: 295 IDSLPGTIRGDFAQVAGRNIVHGSDSVESAKREIGLWFTAKDLGEYKLCADIWVQE 462
            DS PGTIRGDF    GRNI+HGSDSVESAK+EI LWF  ++L EY+ CA  W+ E
Sbjct: 96  ADSKPGTIRGDFCIQVGRNIIHGSDSVESAKKEISLWFKREELVEYQNCAQDWIYE 151

 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 22/35 (62%), Positives = 27/35 (77%)
 Frame = +3

Query: 18  ERSYIMVKPVGVQRG*VGTIITRFEQRGFKLICNK 122
           ER++I VKP GVQR  VG +I RFEQ+GFKL+  K
Sbjct: 4   ERTFIAVKPDGVQRCIVGEVIKRFEQKGFKLVAMK 38
>sp|Q50KA9|NDKA_CANFA Nucleoside diphosphate kinase A (NDK A) (NDP kinase A) (nm23-C1)
          Length = 152

 Score =  151 bits (381), Expect = 1e-36
 Identities = 69/116 (59%), Positives = 88/116 (75%)
 Frame = +1

Query: 115 AIKMMQPDKKLLEVHYQELKDKPFFPKLIEYMLSGPVVCMVWQGYEMVKIGRALLGATRP 294
           A+K++Q  + LL+ HY +LKD+PFF  L++YM SGPVV MVW+G  +VK GR +LG T P
Sbjct: 37  AMKLIQASEDLLKEHYIDLKDRPFFAGLVKYMQSGPVVAMVWEGLNVVKTGRVMLGETNP 96

Query: 295 IDSLPGTIRGDFAQVAGRNIVHGSDSVESAKREIGLWFTAKDLGEYKLCADIWVQE 462
            DS PGTIRGDF    GRNI+HGSDSVESA++EIGLWF  ++L +YK CA  W+ E
Sbjct: 97  ADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEIGLWFQPEELVDYKSCAQNWIYE 152

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 23/38 (60%), Positives = 28/38 (73%)
 Frame = +3

Query: 9   AYHERSYIMVKPVGVQRG*VGTIITRFEQRGFKLICNK 122
           A  ER++I +KP GVQR  VG II RFEQ+GF+LI  K
Sbjct: 2   ANSERTFIAIKPDGVQRSLVGEIIKRFEQKGFRLIAMK 39
>sp|P19804|NDKB_RAT Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (P18)
          Length = 152

 Score =  149 bits (377), Expect = 3e-36
 Identities = 69/116 (59%), Positives = 88/116 (75%)
 Frame = +1

Query: 115 AIKMMQPDKKLLEVHYQELKDKPFFPKLIEYMLSGPVVCMVWQGYEMVKIGRALLGATRP 294
           A+K ++  ++ L+ HY +LKD+PFFP L++YM SGPVV MVW+G  +VK GR +LG T P
Sbjct: 37  AMKFLRASEEHLKQHYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNP 96

Query: 295 IDSLPGTIRGDFAQVAGRNIVHGSDSVESAKREIGLWFTAKDLGEYKLCADIWVQE 462
            DS PGTIRGDF    GRNI+HGSDSVESA++EIGLWF  ++L +YK CA  WV E
Sbjct: 97  ADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEIGLWFKPEELIDYKSCAHDWVYE 152

 Score = 48.5 bits (114), Expect = 9e-06
 Identities = 22/35 (62%), Positives = 28/35 (80%)
 Frame = +3

Query: 18  ERSYIMVKPVGVQRG*VGTIITRFEQRGFKLICNK 122
           ER++I +KP GVQRG VG II RFEQ+GF+L+  K
Sbjct: 5   ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMK 39
>sp|P15531|NDKA_HUMAN Nucleoside diphosphate kinase A (NDK A) (NDP kinase A) (Tumor
           metastatic process-associated protein) (Metastasis
           inhibition factor nm23) (nm23-H1) (Granzyme A-activated
           DNase) (GAAD)
          Length = 152

 Score =  148 bits (373), Expect = 9e-36
 Identities = 68/115 (59%), Positives = 85/115 (73%)
 Frame = +1

Query: 118 IKMMQPDKKLLEVHYQELKDKPFFPKLIEYMLSGPVVCMVWQGYEMVKIGRALLGATRPI 297
           +K MQ  + LL+ HY +LKD+PFF  L++YM SGPVV MVW+G  +VK GR +LG T P 
Sbjct: 38  LKFMQASEDLLKEHYVDLKDRPFFAGLVKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPA 97

Query: 298 DSLPGTIRGDFAQVAGRNIVHGSDSVESAKREIGLWFTAKDLGEYKLCADIWVQE 462
           DS PGTIRGDF    GRNI+HGSDSVESA++EIGLWF  ++L +Y  CA  W+ E
Sbjct: 98  DSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEIGLWFHPEELVDYTSCAQNWIYE 152

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 21/32 (65%), Positives = 27/32 (84%)
 Frame = +3

Query: 18  ERSYIMVKPVGVQRG*VGTIITRFEQRGFKLI 113
           ER++I +KP GVQRG VG II RFEQ+GF+L+
Sbjct: 5   ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLV 36
>sp|P15532|NDKA_MOUSE Nucleoside diphosphate kinase A (NDK A) (NDP kinase A) (Tumor
           metastatic process-associated protein) (Metastasis
           inhibition factor NM23) (NDPK-A) (nm23-M1)
          Length = 152

 Score =  147 bits (371), Expect = 1e-35
 Identities = 67/115 (58%), Positives = 85/115 (73%)
 Frame = +1

Query: 118 IKMMQPDKKLLEVHYQELKDKPFFPKLIEYMLSGPVVCMVWQGYEMVKIGRALLGATRPI 297
           +K +Q  + LL+ HY +LKD+PFF  L++YM SGPVV MVW+G  +VK GR +LG T P 
Sbjct: 38  LKFLQASEDLLKEHYTDLKDRPFFTGLVKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPA 97

Query: 298 DSLPGTIRGDFAQVAGRNIVHGSDSVESAKREIGLWFTAKDLGEYKLCADIWVQE 462
           DS PGTIRGDF    GRNI+HGSDSV+SA++EI LWF  ++L EYK CA  W+ E
Sbjct: 98  DSKPGTIRGDFCIQVGRNIIHGSDSVKSAEKEISLWFQPEELVEYKSCAQNWIYE 152

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 22/35 (62%), Positives = 28/35 (80%)
 Frame = +3

Query: 9   AYHERSYIMVKPVGVQRG*VGTIITRFEQRGFKLI 113
           A  ER++I +KP GVQRG VG II RFEQ+GF+L+
Sbjct: 2   ANSERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLV 36
>sp|P52175|NDKB_BOVIN Nucleoside diphosphate kinase NBR-B (NDK NBR-B) (NDP kinase NBR-B)
          Length = 152

 Score =  147 bits (370), Expect = 2e-35
 Identities = 68/116 (58%), Positives = 85/116 (73%)
 Frame = +1

Query: 115 AIKMMQPDKKLLEVHYQELKDKPFFPKLIEYMLSGPVVCMVWQGYEMVKIGRALLGATRP 294
           A+K M+  + LL+ HY +LKD+PFF  L++YM SGPVV MVW+G  +VK GR +LG T P
Sbjct: 37  AMKFMRASEDLLKEHYIDLKDRPFFAGLVKYMHSGPVVAMVWEGLNVVKTGRVMLGETNP 96

Query: 295 IDSLPGTIRGDFAQVAGRNIVHGSDSVESAKREIGLWFTAKDLGEYKLCADIWVQE 462
            DS PGTIRGDF    GRNI+HGSDSVESA++EI LWF  ++L  YK CA  W+ E
Sbjct: 97  ADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEIALWFRPEELVNYKSCAQNWIYE 152

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 22/38 (57%), Positives = 29/38 (76%)
 Frame = +3

Query: 9   AYHERSYIMVKPVGVQRG*VGTIITRFEQRGFKLICNK 122
           A  ER++I +KP GVQRG +G II RFEQ+GF+L+  K
Sbjct: 2   ANSERTFIAIKPDGVQRGLMGEIIKRFEQKGFRLVAMK 39
>sp|Q01768|NDKB_MOUSE Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (nm23-M2)
           (P18)
          Length = 152

 Score =  146 bits (369), Expect = 3e-35
 Identities = 68/116 (58%), Positives = 87/116 (75%)
 Frame = +1

Query: 115 AIKMMQPDKKLLEVHYQELKDKPFFPKLIEYMLSGPVVCMVWQGYEMVKIGRALLGATRP 294
           A+K ++  ++ L+ HY +LKD+PFFP L++YM SGPVV MVW+G  +VK GR +LG T P
Sbjct: 37  AMKFLRASEEHLKQHYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNP 96

Query: 295 IDSLPGTIRGDFAQVAGRNIVHGSDSVESAKREIGLWFTAKDLGEYKLCADIWVQE 462
            DS PGTIRGDF    GRNI+HGSDSVESA++EI LWF  ++L +YK CA  WV E
Sbjct: 97  ADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEIHLWFKPEELIDYKSCAHDWVYE 152

 Score = 48.5 bits (114), Expect = 9e-06
 Identities = 22/35 (62%), Positives = 28/35 (80%)
 Frame = +3

Query: 18  ERSYIMVKPVGVQRG*VGTIITRFEQRGFKLICNK 122
           ER++I +KP GVQRG VG II RFEQ+GF+L+  K
Sbjct: 5   ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMK 39
>sp|Q05982|NDKA_RAT Nucleoside diphosphate kinase A (NDK A) (NDP kinase A) (Tumor
           metastatic process-associated protein) (Metastasis
           inhibition factor NM23)
          Length = 152

 Score =  146 bits (369), Expect = 3e-35
 Identities = 67/115 (58%), Positives = 85/115 (73%)
 Frame = +1

Query: 118 IKMMQPDKKLLEVHYQELKDKPFFPKLIEYMLSGPVVCMVWQGYEMVKIGRALLGATRPI 297
           +K +Q  + LL+ HY +LKD+PFF  L++YM SGPVV MVW+G  +VK GR +LG T P 
Sbjct: 38  LKFIQASEDLLKEHYIDLKDRPFFSGLVKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPA 97

Query: 298 DSLPGTIRGDFAQVAGRNIVHGSDSVESAKREIGLWFTAKDLGEYKLCADIWVQE 462
           DS PGTIRGDF    GRNI+HGSDSVESA++EI LWF  ++L +YK CA  W+ E
Sbjct: 98  DSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEISLWFQPEELVDYKSCAQNWIYE 152

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 22/35 (62%), Positives = 28/35 (80%)
 Frame = +3

Query: 9   AYHERSYIMVKPVGVQRG*VGTIITRFEQRGFKLI 113
           A  ER++I +KP GVQRG VG II RFEQ+GF+L+
Sbjct: 2   ANSERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLV 36
>sp|P52174|NDKA_BOVIN Nucleoside diphosphate kinase NBR-A (NDK NBR-A) (NDP kinase NBR-A)
          Length = 152

 Score =  146 bits (369), Expect = 3e-35
 Identities = 68/116 (58%), Positives = 85/116 (73%)
 Frame = +1

Query: 115 AIKMMQPDKKLLEVHYQELKDKPFFPKLIEYMLSGPVVCMVWQGYEMVKIGRALLGATRP 294
           A+K M+  + LL+ HY +LKD+PFF  L++YM SGPVV MVW+G  +VK GR +LG T P
Sbjct: 37  AMKFMRASEDLLKEHYIDLKDRPFFAGLVKYMHSGPVVAMVWEGLNVVKTGRVMLGETNP 96

Query: 295 IDSLPGTIRGDFAQVAGRNIVHGSDSVESAKREIGLWFTAKDLGEYKLCADIWVQE 462
            DS PGTIRGDF    GRNI+HGSDSVESA++EI LWF  ++L  YK CA  W+ E
Sbjct: 97  ADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEIALWFHPEELVNYKSCAQNWIYE 152

 Score = 48.5 bits (114), Expect = 9e-06
 Identities = 22/38 (57%), Positives = 29/38 (76%)
 Frame = +3

Query: 9   AYHERSYIMVKPVGVQRG*VGTIITRFEQRGFKLICNK 122
           A  ER++I +KP GVQRG +G II RFEQ+GF+L+  K
Sbjct: 2   ANSERTFIAIKPDGVQRGLIGEIIKRFEQKGFRLVAMK 39
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,864,980
Number of Sequences: 369166
Number of extensions: 1369259
Number of successful extensions: 3748
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3716
length of database: 68,354,980
effective HSP length: 103
effective length of database: 49,327,275
effective search space used: 3403581975
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)