Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_008_L19
(339 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P04811|HSP83_DROVI Heat shock protein 83 (HSP 82) 110 8e-25
sp|O02192|HSP83_DROAV Heat shock protein 83 (HSP 82) 110 1e-24
sp|P04810|HSP83_DROSI Heat shock protein 83 (HSP 82) 109 2e-24
sp|P02828|HSP83_DROME Heat shock protein 83 (HSP 82) 109 2e-24
sp|P04809|HSP83_DROPS Heat shock protein 83 (HSP 82) 109 2e-24
sp|P11501|HS90A_CHICK Heat shock protein HSP 90-alpha 109 2e-24
sp|Q04619|HS90B_CHICK Heat shock cognate protein HSP 90-beta 108 4e-24
sp|P07900|HS90A_HUMAN Heat shock protein HSP 90-alpha (HSP 86) 108 4e-24
sp|P07901|HS90A_MOUSE Heat shock protein HSP 90-alpha (HSP ... 108 4e-24
sp|O02705|HS90A_PIG Heat shock protein HSP 90-alpha (HSP 86) 108 4e-24
>sp|P04811|HSP83_DROVI Heat shock protein 83 (HSP 82)
Length = 374
Score = 110 bits (276), Expect = 8e-25
Identities = 49/75 (65%), Positives = 64/75 (85%)
Frame = +1
Query: 52 VADKGQVISKSKDEEQYLWESSAGGSITIKNDNSEPWGRGTRIILFMREDQVEYLEEREI 231
VADK V SK+ D+EQY+WESSAGGS T++ DNSEP GRGT+I+LF++EDQ +YLEE +I
Sbjct: 132 VADKVTVTSKNNDDEQYVWESSAGGSFTVRADNSEPLGRGTKIVLFIKEDQTDYLEESKI 191
Query: 232 RDIIKEHSQFSGYPI 276
++I+ +HSQF GYPI
Sbjct: 192 KEIVNKHSQFIGYPI 206
>sp|O02192|HSP83_DROAV Heat shock protein 83 (HSP 82)
Length = 716
Score = 110 bits (274), Expect = 1e-24
Identities = 48/75 (64%), Positives = 64/75 (85%)
Frame = +1
Query: 52 VADKGQVISKSKDEEQYLWESSAGGSITIKNDNSEPWGRGTRIILFMREDQVEYLEEREI 231
VADK V SK+ D+EQY+WESSAGGS T++ DNSEP GRGT+I+L+++EDQ +YLEE +I
Sbjct: 132 VADKVTVTSKNNDDEQYIWESSAGGSFTVRADNSEPLGRGTKIVLYIKEDQTDYLEESKI 191
Query: 232 RDIIKEHSQFSGYPI 276
++I+ +HSQF GYPI
Sbjct: 192 KEIVNKHSQFIGYPI 206
>sp|P04810|HSP83_DROSI Heat shock protein 83 (HSP 82)
Length = 375
Score = 109 bits (273), Expect = 2e-24
Identities = 48/75 (64%), Positives = 64/75 (85%)
Frame = +1
Query: 52 VADKGQVISKSKDEEQYLWESSAGGSITIKNDNSEPWGRGTRIILFMREDQVEYLEEREI 231
VADK V SK+ D+EQY+WESSAGGS T++ DNSEP GRGT+I+L+++EDQ +YLEE +I
Sbjct: 132 VADKVTVTSKNNDDEQYVWESSAGGSFTVRADNSEPLGRGTKIVLYIKEDQTDYLEESKI 191
Query: 232 RDIIKEHSQFSGYPI 276
++I+ +HSQF GYPI
Sbjct: 192 KEIVNKHSQFIGYPI 206
>sp|P02828|HSP83_DROME Heat shock protein 83 (HSP 82)
Length = 717
Score = 109 bits (273), Expect = 2e-24
Identities = 48/75 (64%), Positives = 64/75 (85%)
Frame = +1
Query: 52 VADKGQVISKSKDEEQYLWESSAGGSITIKNDNSEPWGRGTRIILFMREDQVEYLEEREI 231
VADK V SK+ D+EQY+WESSAGGS T++ DNSEP GRGT+I+L+++EDQ +YLEE +I
Sbjct: 132 VADKVTVTSKNNDDEQYVWESSAGGSFTVRADNSEPLGRGTKIVLYIKEDQTDYLEESKI 191
Query: 232 RDIIKEHSQFSGYPI 276
++I+ +HSQF GYPI
Sbjct: 192 KEIVNKHSQFIGYPI 206
>sp|P04809|HSP83_DROPS Heat shock protein 83 (HSP 82)
Length = 375
Score = 109 bits (272), Expect = 2e-24
Identities = 47/75 (62%), Positives = 64/75 (85%)
Frame = +1
Query: 52 VADKGQVISKSKDEEQYLWESSAGGSITIKNDNSEPWGRGTRIILFMREDQVEYLEEREI 231
+AD+ V SK+ D+EQY+WESSAGGS T+K DNSEP GRGT+I+L+++EDQ +YLEE +I
Sbjct: 132 IADRVTVTSKNNDDEQYVWESSAGGSFTVKADNSEPLGRGTKIVLYIKEDQTDYLEESKI 191
Query: 232 RDIIKEHSQFSGYPI 276
++I+ +HSQF GYPI
Sbjct: 192 KEIVNKHSQFIGYPI 206
>sp|P11501|HS90A_CHICK Heat shock protein HSP 90-alpha
Length = 728
Score = 109 bits (272), Expect = 2e-24
Identities = 49/75 (65%), Positives = 62/75 (82%)
Frame = +1
Query: 52 VADKGQVISKSKDEEQYLWESSAGGSITIKNDNSEPWGRGTRIILFMREDQVEYLEEREI 231
VA+K VI+K D+EQY WESSAGGS T++ DN EP GRGT++IL ++EDQ EYLEER I
Sbjct: 143 VAEKVTVITKHNDDEQYAWESSAGGSFTVRLDNGEPLGRGTKVILHLKEDQTEYLEERRI 202
Query: 232 RDIIKEHSQFSGYPI 276
++I+K+HSQF GYPI
Sbjct: 203 KEIVKKHSQFIGYPI 217
>sp|Q04619|HS90B_CHICK Heat shock cognate protein HSP 90-beta
Length = 725
Score = 108 bits (270), Expect = 4e-24
Identities = 46/75 (61%), Positives = 63/75 (84%)
Frame = +1
Query: 52 VADKGQVISKSKDEEQYLWESSAGGSITIKNDNSEPWGRGTRIILFMREDQVEYLEEREI 231
VA+K VI+K D+EQY WESSAGGS T++ D+ EP GRGT++IL+++EDQ EYLEER +
Sbjct: 139 VAEKVVVITKHNDDEQYAWESSAGGSFTVRTDHGEPIGRGTKVILYLKEDQTEYLEERRV 198
Query: 232 RDIIKEHSQFSGYPI 276
++++K+HSQF GYPI
Sbjct: 199 KEVVKKHSQFIGYPI 213
>sp|P07900|HS90A_HUMAN Heat shock protein HSP 90-alpha (HSP 86)
Length = 732
Score = 108 bits (270), Expect = 4e-24
Identities = 48/75 (64%), Positives = 61/75 (81%)
Frame = +1
Query: 52 VADKGQVISKSKDEEQYLWESSAGGSITIKNDNSEPWGRGTRIILFMREDQVEYLEEREI 231
VA+K VI+K D+EQY WESSAGGS T++ D EP GRGT++IL ++EDQ EYLEER I
Sbjct: 144 VAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRI 203
Query: 232 RDIIKEHSQFSGYPI 276
++I+K+HSQF GYPI
Sbjct: 204 KEIVKKHSQFIGYPI 218
>sp|P07901|HS90A_MOUSE Heat shock protein HSP 90-alpha (HSP 86) (Tumor specific
transplantation 86 kDa antigen) (TSTA)
Length = 733
Score = 108 bits (270), Expect = 4e-24
Identities = 48/75 (64%), Positives = 61/75 (81%)
Frame = +1
Query: 52 VADKGQVISKSKDEEQYLWESSAGGSITIKNDNSEPWGRGTRIILFMREDQVEYLEEREI 231
VA+K VI+K D+EQY WESSAGGS T++ D EP GRGT++IL ++EDQ EYLEER I
Sbjct: 144 VAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRI 203
Query: 232 RDIIKEHSQFSGYPI 276
++I+K+HSQF GYPI
Sbjct: 204 KEIVKKHSQFIGYPI 218
>sp|O02705|HS90A_PIG Heat shock protein HSP 90-alpha (HSP 86)
Length = 733
Score = 108 bits (270), Expect = 4e-24
Identities = 48/75 (64%), Positives = 61/75 (81%)
Frame = +1
Query: 52 VADKGQVISKSKDEEQYLWESSAGGSITIKNDNSEPWGRGTRIILFMREDQVEYLEEREI 231
VA+K VI+K D+EQY WESSAGGS T++ D EP GRGT++IL ++EDQ EYLEER I
Sbjct: 144 VAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRI 203
Query: 232 RDIIKEHSQFSGYPI 276
++I+K+HSQF GYPI
Sbjct: 204 KEIVKKHSQFIGYPI 218
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.312 0.133 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,314,148
Number of Sequences: 369166
Number of extensions: 506380
Number of successful extensions: 1303
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1279
length of database: 68,354,980
effective HSP length: 80
effective length of database: 53,576,180
effective search space used: 1714437760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)