Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_008_K11
(859 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P24643|CALX_CANFA Calnexin precursor (pp90) 323 3e-88
sp|P35565|CALX_RAT Calnexin precursor 323 4e-88
sp|P35564|CALX_MOUSE Calnexin precursor 323 4e-88
sp|Q5R440|CALX_PONPY Calnexin precursor 320 3e-87
sp|P27824|CALX_HUMAN Calnexin precursor (Major histocompati... 319 5e-87
sp|P52194|CLGN_MOUSE Calmegin precursor (MEG 1 antigen) (Ca... 284 3e-76
sp|O14967|CLGN_HUMAN Calmegin precursor 281 2e-75
sp|Q38798|CALX2_ARATH Calnexin homolog 2 precursor 263 5e-70
sp|P29402|CALX1_ARATH Calnexin homolog 1 precursor 261 1e-69
sp|Q39817|CALX_SOYBN Calnexin homolog precursor 258 1e-68
>sp|P24643|CALX_CANFA Calnexin precursor (pp90)
Length = 593
Score = 323 bits (829), Expect = 3e-88
Identities = 148/290 (51%), Positives = 191/290 (65%), Gaps = 7/290 (2%)
Frame = +2
Query: 5 FGTRVDQTLVNSGSLLKDFEPSVNPPKEIDDPNDVKPEDWDDTPKISDPDAVKPGDWDDS 184
F VDQ++VNSG+LL D P VNP +EI+DP D KPEDWD+ PKI DPDAVKP DW++
Sbjct: 249 FEILVDQSIVNSGNLLNDMTPPVNPSREIEDPEDQKPEDWDERPKIPDPDAVKPDDWNED 308
Query: 185 APEYIEDEKAVKPDGWLENEPLTVPDEKSEKPKDWDDEMDGEWEAPRIDNPLCKDAPGCG 364
AP I DE+A KPDGWL++EP VPD +EKP+DWD++MDGEWEAP+I NP C+ APGCG
Sbjct: 309 APAKIPDEEATKPDGWLDDEPEYVPDPDAEKPEDWDEDMDGEWEAPQIANPKCESAPGCG 368
Query: 365 PWKSPKIKNPNYKGVWTAPMIDNPKYKGVWKARRIPNADYFEDAQPYKMTPIGAIGLELW 544
W+ P I NPNYKG W PMIDNP Y+G+WK R+IPN D+FED +P+KMTP AIGLELW
Sbjct: 369 VWQRPMIDNPNYKGKWKPPMIDNPNYQGIWKPRKIPNPDFFEDLEPFKMTPFSAIGLELW 428
Query: 545 SMSDEIVFDNFIIVDNKKAADDFAAETWVVKKDAERRADPNSQSVVDAIREATSERXXXX 724
SM+ +I FDNFI+ +++ DD+A + W +KK A+ A+P VV + EA ER
Sbjct: 429 SMTSDIFFDNFIVCGDRRVVDDWANDGWGLKKAADGAAEP---GVVGQMIEAAEERPWLW 485
Query: 725 XXXXXXXXXXXXXXXXYCCRNSGSDKSAEYER-------MKREMHKKNDD 853
+CC EY++ +K E +K ++
Sbjct: 486 VVYVLTVALPVFLVILFCCSGKKQSSPVEYKKTDAPQPDVKEEEEEKEEE 535
>sp|P35565|CALX_RAT Calnexin precursor
Length = 591
Score = 323 bits (828), Expect = 4e-88
Identities = 144/272 (52%), Positives = 186/272 (68%)
Frame = +2
Query: 5 FGTRVDQTLVNSGSLLKDFEPSVNPPKEIDDPNDVKPEDWDDTPKISDPDAVKPGDWDDS 184
F VDQ++VNSG+LL D P VNP +EI+DP D KPEDWD+ PKI+DPDAVKP DWD+
Sbjct: 249 FEILVDQSVVNSGNLLNDMTPPVNPSREIEDPEDRKPEDWDERPKIADPDAVKPDDWDED 308
Query: 185 APEYIEDEKAVKPDGWLENEPLTVPDEKSEKPKDWDDEMDGEWEAPRIDNPLCKDAPGCG 364
AP I DE+A KP+GWL++EP +PD +EKP+DWD++MDGEWEAP+I NP C+ APGCG
Sbjct: 309 APSKIPDEEATKPEGWLDDEPEYIPDPDAEKPEDWDEDMDGEWEAPQIANPKCESAPGCG 368
Query: 365 PWKSPKIKNPNYKGVWTAPMIDNPKYKGVWKARRIPNADYFEDAQPYKMTPIGAIGLELW 544
W+ P I NPNYKG W PMIDNP Y+G+WK R+IPN D+FED +P++MTP AIGLELW
Sbjct: 369 VWQRPMIDNPNYKGKWKPPMIDNPNYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELW 428
Query: 545 SMSDEIVFDNFIIVDNKKAADDFAAETWVVKKDAERRADPNSQSVVDAIREATSERXXXX 724
SM+ +I FDNFII +++ DD+A + W +KK A+ A+P VV + EA ER
Sbjct: 429 SMTSDIFFDNFIISGDRRVVDDWANDGWGLKKAADGAAEP---GVVGQMLEAAEERPWLW 485
Query: 725 XXXXXXXXXXXXXXXXYCCRNSGSDKSAEYER 820
+CC + EY++
Sbjct: 486 VVYILTVALPVFLVILFCCSGKKQSNAMEYKK 517
>sp|P35564|CALX_MOUSE Calnexin precursor
Length = 591
Score = 323 bits (828), Expect = 4e-88
Identities = 145/272 (53%), Positives = 186/272 (68%)
Frame = +2
Query: 5 FGTRVDQTLVNSGSLLKDFEPSVNPPKEIDDPNDVKPEDWDDTPKISDPDAVKPGDWDDS 184
F VDQ++VNSG+LL D P VNP +EI+DP D KPEDWD+ PKI+DPDAVKP DWD+
Sbjct: 249 FEILVDQSVVNSGNLLNDMTPPVNPSREIEDPEDRKPEDWDERPKIADPDAVKPDDWDED 308
Query: 185 APEYIEDEKAVKPDGWLENEPLTVPDEKSEKPKDWDDEMDGEWEAPRIDNPLCKDAPGCG 364
AP I DE+A KP+GWL++EP +PD +EKP+DWD++MDGEWEAP+I NP C+ APGCG
Sbjct: 309 APSKIPDEEATKPEGWLDDEPEYIPDPDAEKPEDWDEDMDGEWEAPQIANPKCESAPGCG 368
Query: 365 PWKSPKIKNPNYKGVWTAPMIDNPKYKGVWKARRIPNADYFEDAQPYKMTPIGAIGLELW 544
W+ P I NPNYKG W PMIDNP Y+G+WK R+IPN D+FED +P+KMTP AIGLELW
Sbjct: 369 VWQRPMIDNPNYKGKWKPPMIDNPNYQGIWKPRKIPNPDFFEDLEPFKMTPFSAIGLELW 428
Query: 545 SMSDEIVFDNFIIVDNKKAADDFAAETWVVKKDAERRADPNSQSVVDAIREATSERXXXX 724
SM+ +I FDNFII +++ DD+A + W +KK A+ A+P VV + EA ER
Sbjct: 429 SMTSDIFFDNFIISGDRRVVDDWANDGWGLKKAADGAAEP---GVVLQMLEAAEERPWLW 485
Query: 725 XXXXXXXXXXXXXXXXYCCRNSGSDKSAEYER 820
+CC + EY++
Sbjct: 486 VVYILTVALPVFLVILFCCSGKKQSNAMEYKK 517
>sp|Q5R440|CALX_PONPY Calnexin precursor
Length = 592
Score = 320 bits (820), Expect = 3e-87
Identities = 147/290 (50%), Positives = 192/290 (66%), Gaps = 7/290 (2%)
Frame = +2
Query: 5 FGTRVDQTLVNSGSLLKDFEPSVNPPKEIDDPNDVKPEDWDDTPKISDPDAVKPGDWDDS 184
F VDQ++VNSG+LL D P VNP +EI+DP D KPEDWD+ PKI DP+AVKP DWD+
Sbjct: 248 FEILVDQSVVNSGNLLNDMTPPVNPSREIEDPEDRKPEDWDERPKIPDPEAVKPDDWDED 307
Query: 185 APEYIEDEKAVKPDGWLENEPLTVPDEKSEKPKDWDDEMDGEWEAPRIDNPLCKDAPGCG 364
AP I DE+A KP+GWL++EP VPD +EKP+DWD++MDGEWEAP+I NP C+ APGCG
Sbjct: 308 APAKIPDEEATKPEGWLDDEPEYVPDPDAEKPEDWDEDMDGEWEAPQIANPKCESAPGCG 367
Query: 365 PWKSPKIKNPNYKGVWTAPMIDNPKYKGVWKARRIPNADYFEDAQPYKMTPIGAIGLELW 544
W+ P I NPNYKG W PMIDNP Y+G+WK R+IPN D+FED +P++MTP AIGLELW
Sbjct: 368 VWQRPMIDNPNYKGKWKPPMIDNPSYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELW 427
Query: 545 SMSDEIVFDNFIIVDNKKAADDFAAETWVVKKDAERRADPNSQSVVDAIREATSERXXXX 724
SM+ +I FDNFII +++ DD+A + W +KK A+ A+P VV + EA ER
Sbjct: 428 SMTSDIFFDNFIICADRRIVDDWANDGWGLKKAADGAAEP---GVVGQMIEAAEERPWLW 484
Query: 725 XXXXXXXXXXXXXXXXYCCRNSGSDKSAEYER-------MKREMHKKNDD 853
+CC + EY++ +K E +K ++
Sbjct: 485 VVYILTVALPVFLVILFCCSGKKQTSAMEYKKTDAPQPDVKEEEEEKEEE 534
>sp|P27824|CALX_HUMAN Calnexin precursor (Major histocompatibility complex class I
antigen-binding protein p88) (p90) (IP90)
Length = 592
Score = 319 bits (818), Expect = 5e-87
Identities = 147/290 (50%), Positives = 191/290 (65%), Gaps = 7/290 (2%)
Frame = +2
Query: 5 FGTRVDQTLVNSGSLLKDFEPSVNPPKEIDDPNDVKPEDWDDTPKISDPDAVKPGDWDDS 184
F VDQ++VNSG+LL D P VNP +EI+DP D KPEDWD+ PKI DP+AVKP DWD+
Sbjct: 248 FEILVDQSVVNSGNLLNDMTPPVNPSREIEDPEDRKPEDWDERPKIPDPEAVKPDDWDED 307
Query: 185 APEYIEDEKAVKPDGWLENEPLTVPDEKSEKPKDWDDEMDGEWEAPRIDNPLCKDAPGCG 364
AP I DE+A KP+GWL++EP VPD +EKP+DWD++MDGEWEAP+I NP C+ APGCG
Sbjct: 308 APAKIPDEEATKPEGWLDDEPEYVPDPDAEKPEDWDEDMDGEWEAPQIANPRCESAPGCG 367
Query: 365 PWKSPKIKNPNYKGVWTAPMIDNPKYKGVWKARRIPNADYFEDAQPYKMTPIGAIGLELW 544
W+ P I NPNYKG W PMIDNP Y+G+WK R+IPN D+FED +P++MTP AIGLELW
Sbjct: 368 VWQRPVIDNPNYKGKWKPPMIDNPSYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELW 427
Query: 545 SMSDEIVFDNFIIVDNKKAADDFAAETWVVKKDAERRADPNSQSVVDAIREATSERXXXX 724
SM+ +I FDNFII +++ DD+A + W +KK A+ A+P VV + EA ER
Sbjct: 428 SMTSDIFFDNFIICADRRIVDDWANDGWGLKKAADGAAEP---GVVGQMIEAAEERPWLW 484
Query: 725 XXXXXXXXXXXXXXXXYCCRNSGSDKSAEYER-------MKREMHKKNDD 853
+CC EY++ +K E +K ++
Sbjct: 485 VVYILTVALPVFLVILFCCSGKKQTSGMEYKKTDAPQPDVKEEEEEKEEE 534
>sp|P52194|CLGN_MOUSE Calmegin precursor (MEG 1 antigen) (Calnexin-T) (A2/6)
Length = 611
Score = 284 bits (726), Expect = 3e-76
Identities = 128/236 (54%), Positives = 163/236 (69%)
Frame = +2
Query: 5 FGTRVDQTLVNSGSLLKDFEPSVNPPKEIDDPNDVKPEDWDDTPKISDPDAVKPGDWDDS 184
F +DQ +VN G+LL D P +NPP+EIDDP+D KPE+WDD KI DP AVKP DWD++
Sbjct: 239 FEVLIDQKVVNQGTLLDDVVPPINPpreIDDPSDKKPEEWDDRAKIPDPTAVKPEDWDEN 298
Query: 185 APEYIEDEKAVKPDGWLENEPLTVPDEKSEKPKDWDDEMDGEWEAPRIDNPLCKDAPGCG 364
P IED AVKPDGWL++EP +P+ K+EKP+DW D+MDGEWEAP I NP C+ GCG
Sbjct: 299 EPAQIEDSSAVKPDGWLDDEPKFIPNPKAEKPEDWSDDMDGEWEAPHIPNPACQ--IGCG 356
Query: 365 PWKSPKIKNPNYKGVWTAPMIDNPKYKGVWKARRIPNADYFEDAQPYKMTPIGAIGLELW 544
WK P I NP YKG+W PMI+NP Y+G+W ++IPN DYFED P+ +T A+GLELW
Sbjct: 357 EWKPPMIDNPKYKGIWRPPMINNPNYQGLWSPQKIPNPDYFEDDHPFLLTSFSALGLELW 416
Query: 545 SMSDEIVFDNFIIVDNKKAADDFAAETWVVKKDAERRADPNSQSVVDAIREATSER 712
SM+ +I FDNFII K+ AD +A + W +K A+ N V+ + A ER
Sbjct: 417 SMTPDIYFDNFIICSEKEVADQWATDGWELKIMV---ANANEPGVLRQLVIAAEER 469
>sp|O14967|CLGN_HUMAN Calmegin precursor
Length = 610
Score = 281 bits (719), Expect = 2e-75
Identities = 122/208 (58%), Positives = 151/208 (72%)
Frame = +2
Query: 5 FGTRVDQTLVNSGSLLKDFEPSVNPPKEIDDPNDVKPEDWDDTPKISDPDAVKPGDWDDS 184
F VDQT+VN GSLL+D P + PPKEI+DPND KPE+WD+ KI DP AVKP DWD+S
Sbjct: 239 FEVLVDQTVVNKGSLLEDVVPPIKPPKEIEDPNDKKPEEWDERAKIPDPSAVKPEDWDES 298
Query: 185 APEYIEDEKAVKPDGWLENEPLTVPDEKSEKPKDWDDEMDGEWEAPRIDNPLCKDAPGCG 364
P IED VKP GWL++EP +PD +EKP DW+++ DGEWEAP+I NP C+ GCG
Sbjct: 299 EPAQIEDSSVVKPAGWLDDEPKFIPDPNAEKPDDWNEDTDGEWEAPQILNPACR--IGCG 356
Query: 365 PWKSPKIKNPNYKGVWTAPMIDNPKYKGVWKARRIPNADYFEDAQPYKMTPIGAIGLELW 544
WK P I NP YKGVW P++DNP Y+G+W R+IPN DYFED P+ +T A+GLELW
Sbjct: 357 EWKPPMIDNPKYKGVWRPPLVDNPNYQGIWSPRKIPNPDYFEDDHPFLLTSFSALGLELW 416
Query: 545 SMSDEIVFDNFIIVDNKKAADDFAAETW 628
SM+ +I FDNFII K+ AD +AA+ W
Sbjct: 417 SMTSDIYFDNFIICSEKEVADHWAADGW 444
>sp|Q38798|CALX2_ARATH Calnexin homolog 2 precursor
Length = 532
Score = 263 bits (672), Expect = 5e-70
Identities = 120/231 (51%), Positives = 159/231 (68%), Gaps = 5/231 (2%)
Frame = +2
Query: 17 VDQTLVNSGSLL--KDFEPSVNPPKEIDDPNDVKPEDWDDTPKISDPDAVKPGDWDDSAP 190
VD G+LL +DFEP + P K I DP D KPEDWD+ KI DP+AVKP DWD+ AP
Sbjct: 199 VDGEEKKKGNLLSAEDFEPPLIPSKTIPDPEDKKPEDWDERAKIPDPNAVKPDDWDEDAP 258
Query: 191 EYIEDEKAVKPDGWLENEPLTVPDEKSEKPKDWDDEMDGEWEAPRIDNPLCKDAPGCGPW 370
IEDE+A KP+GWL++EP+ V D ++ KP+DWDDE DGEWEAP++ N C+ APGCG W
Sbjct: 259 MEIEDEEAEKPEGWLDDEPVEVEDPEASKPEDWDDEEDGEWEAPKVSNTKCEAAPGCGEW 318
Query: 371 KSPKIKNPNYKGVWTAPMIDNPKYKGVWKARRIPNADYFEDAQPYKMTPIGAIGLELWSM 550
K P +NP YKG W++P+IDNP YKG+WK R IPN DYFE +P + PI AIG+E+W+M
Sbjct: 319 KRPMKRNPAYKGKWSSPLIDNPAYKGIWKPRDIPNPDYFELERP-NLEPIAAIGIEIWTM 377
Query: 551 SDEIVFDNFIIVDNKKAADDFAAETWVVKKDAER---RADPNSQSVVDAIR 694
D I+FDN +I ++K A+ + TW K D E+ +A+ + D ++
Sbjct: 378 QDGILFDNILISKDEKVAETYRQSTWKPKFDVEKEKQKAEDEAAGEADGLK 428
>sp|P29402|CALX1_ARATH Calnexin homolog 1 precursor
Length = 530
Score = 261 bits (668), Expect = 1e-69
Identities = 117/217 (53%), Positives = 153/217 (70%), Gaps = 3/217 (1%)
Frame = +2
Query: 53 KDFEPSVNPPKEIDDPNDVKPEDWDDTPKISDPDAVKPGDWDDSAPEYIEDEKAVKPDGW 232
+DFEP++ P K I DP D KPEDWD+ KI DP+AVKP DWD+ AP IEDE+A KP+GW
Sbjct: 211 EDFEPALIPAKTIPDPEDKKPEDWDERAKIPDPNAVKPEDWDEDAPMEIEDEEAEKPEGW 270
Query: 233 LENEPLTVPDEKSEKPKDWDDEMDGEWEAPRIDNPLCKDAPGCGPWKSPKIKNPNYKGVW 412
L++EP V D ++ KP+DWDDE DG WEAP+IDNP C+ APGCG WK P +NP YKG W
Sbjct: 271 LDDEPEEVDDPEATKPEDWDDEEDGMWEAPKIDNPKCEAAPGCGEWKRPMKRNPAYKGKW 330
Query: 413 TAPMIDNPKYKGVWKARRIPNADYFEDAQPYKMTPIGAIGLELWSMSDEIVFDNFIIVDN 592
++P+IDNP YKG+WK R IPN DYFE +P PI AIG+E+W+M D I+FDN +I +
Sbjct: 331 SSPLIDNPAYKGIWKPRDIPNPDYFELDRP-DYEPIAAIGIEIWTMQDGILFDNILIAKD 389
Query: 593 KKAADDFAAETWVVKKDAER---RADPNSQSVVDAIR 694
+K A+ + TW K D E+ +A+ + D ++
Sbjct: 390 EKVAETYRQTTWKPKFDVEKEKQKAEEEAAGSADGLK 426
>sp|Q39817|CALX_SOYBN Calnexin homolog precursor
Length = 546
Score = 258 bits (659), Expect = 1e-68
Identities = 113/200 (56%), Positives = 144/200 (72%)
Frame = +2
Query: 53 KDFEPSVNPPKEIDDPNDVKPEDWDDTPKISDPDAVKPGDWDDSAPEYIEDEKAVKPDGW 232
+DFEP + P K I DP+D KPEDWD+ KI DP AVKP DWD+ AP I DE+A KP+GW
Sbjct: 220 EDFEPPLIPSKTIPDPDDKKPEDWDERAKIPDPSAVKPDDWDEDAPMEILDEEAEKPEGW 279
Query: 233 LENEPLTVPDEKSEKPKDWDDEMDGEWEAPRIDNPLCKDAPGCGPWKSPKIKNPNYKGVW 412
L++EP + D ++ KP+DWDDE DGEWEAP+I+NP C+ APGCG WK P +NP YKG W
Sbjct: 280 LDDEPEEIDDPEATKPEDWDDEEDGEWEAPKIENPKCEAAPGCGEWKRPTKRNPAYKGKW 339
Query: 413 TAPMIDNPKYKGVWKARRIPNADYFEDAQPYKMTPIGAIGLELWSMSDEIVFDNFIIVDN 592
+AP IDNP YKG+WK R IPN +YFE A+P PI AIG+E+W+M D I+FDN +I ++
Sbjct: 340 SAPYIDNPSYKGIWKpreIPNPEYFELAKP-DFEPIAAIGIEIWTMQDGILFDNVLIAND 398
Query: 593 KKAADDFAAETWVVKKDAER 652
K A+ + TW K E+
Sbjct: 399 DKVAESYRETTWKPKFTVEK 418
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,410,670
Number of Sequences: 369166
Number of extensions: 2263977
Number of successful extensions: 7304
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6730
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8486520240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)