Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_008_J19
(852 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9Y6R4|M3K4_HUMAN Mitogen-activated protein kinase kinas... 176 1e-43
sp|O08648|M3K4_MOUSE Mitogen-activated protein kinase kinas... 173 5e-43
sp|O22040|M3K1_ARATH Mitogen-activated protein kinase kinas... 151 2e-36
sp|Q9FZ36|M3K2_ARATH Mitogen-activated protein kinase kinas... 149 1e-35
sp|O22042|M3K3_ARATH Mitogen-activated protein kinase kinas... 148 2e-35
sp|P25390|SSK22_YEAST Serine/threonine-protein kinase SSK22... 147 3e-35
sp|O14299|WIS4_SCHPO MAP kinase kinase kinase wis4 (MAP kin... 145 2e-34
sp|P53599|SSK2_YEAST MAP kinase kinase kinase SSK2 (Suppres... 143 5e-34
sp|Q10407|MKH1_SCHPO MAP kinase kinase kinase mkh1 140 4e-33
sp|Q01389|BCK1_YEAST Serine/threonine-protein kinase BCK1/S... 138 2e-32
>sp|Q9Y6R4|M3K4_HUMAN Mitogen-activated protein kinase kinase kinase 4 (MAPK/ERK kinase
kinase 4) (MEK kinase 4) (MEKK 4) (MAP three kinase 1)
Length = 1607
Score = 176 bits (445), Expect = 1e-43
Identities = 106/270 (39%), Positives = 150/270 (55%), Gaps = 10/270 (3%)
Frame = +1
Query: 4 IGQGHAGTVYKVCNLDTMEIMAMKEIVI----NEPFSQDLIECDLLCKLNHTSLLKYYGV 171
IG+G G VY ++DT E+MAMKEI ++ + E + + H +L++Y+GV
Sbjct: 1348 IGEGQYGKVYTCISVDTGELMAMKEIRFQPNDHKTIKETADELKIFEGIKHPNLVRYFGV 1407
Query: 172 DISLSHMRIFTEYCESGSLSQVSILDIPEINLRQWTKQILEAIVHLHNHKIVHRDVKPDN 351
++ M IF EYC+ G+L +VS L + E +R ++KQI AI LH H IVHRD+K N
Sbjct: 1408 ELHREEMYIFMEYCDEGTLEEVSRLGLQEHVIRLYSKQITIAINVLHEHGIVHRDIKGAN 1467
Query: 352 IFLKNIQDTNECHAKLGDFGVAKCLSHQ-----DGLKDIKGTVMYMAPEVVVVDSEQNKS 516
IFL T+ KLGDFG + L + + GT YMAPEV+
Sbjct: 1468 IFL-----TSSGLIKLGDFGCSVKLKNNAQTMPGEVNSTLGTAAYMAPEVIT-----RAK 1517
Query: 517 KSGYNHKVDIWSLGCMVLYMITGKPPWDE-NHQLAIYYNLGNKKLPQIPEVDSSHRMTKE 693
G+ DIWSLGC+V+ M+TGK PW E H I Y +G P IPE R++ E
Sbjct: 1518 GEGHGRAADIWSLGCVVIEMVTGKRPWHEYEHNFQIMYKVGMGHKPPIPE-----RLSPE 1572
Query: 694 ARDFICACLKSNPDDRLEALDLMNYNFVKL 783
+DF+ CL+S+P R A L++++FVK+
Sbjct: 1573 GKDFLSHCLESDPKMRWTASQLLDHSFVKV 1602
>sp|O08648|M3K4_MOUSE Mitogen-activated protein kinase kinase kinase 4 (MAPK/ERK kinase
kinase 4) (MEK kinase 4) (MEKK 4)
Length = 1597
Score = 173 bits (439), Expect = 5e-43
Identities = 106/270 (39%), Positives = 148/270 (54%), Gaps = 10/270 (3%)
Frame = +1
Query: 4 IGQGHAGTVYKVCNLDTMEIMAMKEIVI----NEPFSQDLIECDLLCKLNHTSLLKYYGV 171
IG+G G VY ++DT E+MAMKEI ++ + E + + H +L++Y+GV
Sbjct: 1338 IGEGQYGKVYTCISVDTGELMAMKEIRFQPNDHKTIKETADELKIFEGIKHPNLVRYFGV 1397
Query: 172 DISLSHMRIFTEYCESGSLSQVSILDIPEINLRQWTKQILEAIVHLHNHKIVHRDVKPDN 351
++ M IF EYC+ G+L +VS L + E +R +TKQI AI LH H IVHRD+K N
Sbjct: 1398 ELHREEMYIFMEYCDEGTLEEVSRLGLQEHVIRLYTKQITVAINVLHEHGIVHRDIKGAN 1457
Query: 352 IFLKNIQDTNECHAKLGDFGVAKCLSHQ-----DGLKDIKGTVMYMAPEVVVVDSEQNKS 516
IFL T+ KLGDFG + L + + GT YMAPEV+
Sbjct: 1458 IFL-----TSSGLIKLGDFGCSVKLKNNAQTMPGEVNSTLGTAAYMAPEVIT-----RAK 1507
Query: 517 KSGYNHKVDIWSLGCMVLYMITGKPPWDE-NHQLAIYYNLGNKKLPQIPEVDSSHRMTKE 693
G+ DIWSLGC+V+ M+TGK PW E H I Y +G P IPE R++ E
Sbjct: 1508 GEGHGRAADIWSLGCVVIEMVTGKRPWHEYEHNFQIMYKVGMGHKPPIPE-----RLSPE 1562
Query: 694 ARDFICACLKSNPDDRLEALDLMNYNFVKL 783
+ F+ CL+S+P R A L+++ FVK+
Sbjct: 1563 GKAFLSHCLESDPKIRWTASQLLDHAFVKV 1592
>sp|O22040|M3K1_ARATH Mitogen-activated protein kinase kinase kinase 1 (Arabidospsis
NPK1-related protein kinase 1)
Length = 666
Score = 151 bits (382), Expect = 2e-36
Identities = 101/278 (36%), Positives = 157/278 (56%), Gaps = 19/278 (6%)
Frame = +1
Query: 1 LIGQGHAGTVYKVCNLDTMEIMAMKEIVINEPFS---------QDLIE-CDLLCKLNHTS 150
LIG+G GTVY NLD+ E++A+K+++I F+ Q+L E LL L+H +
Sbjct: 74 LIGRGAFGTVYMGMNLDSGELLAVKQVLIAANFASKEKTQAHIQELEEEVKLLKNLSHPN 133
Query: 151 LLKYYGVDISLSHMRIFTEYCESGSLSQVSILD----IPEINLRQWTKQILEAIVHLHNH 318
+++Y G + I E+ GS+S S+L+ PE +R +T+Q+L + +LHNH
Sbjct: 134 IVRYLGTVREDDTLNILLEFVPGGSIS--SLLEKFGPFPESVVRTYTRQLLLGLEYLHNH 191
Query: 319 KIVHRDVKPDNIFLKNIQDTNECHAKLGDFGVAKC---LSHQDGLKDIKGTVMYMAPEVV 489
I+HRD+K NI + D C KL DFG +K L+ G K +KGT +MAPEV+
Sbjct: 192 AIMHRDIKGANILV----DNKGC-IKLADFGASKQVAELATMTGAKSMKGTPYWMAPEVI 246
Query: 490 VVDSEQNKSKSGYNHKVDIWSLGCMVLYMITGKPPWDENHQ--LAIYYNLGNKKLPQIPE 663
+ ++G++ DIWS+GC V+ M+TGK PW + ++ AI++ K P IP+
Sbjct: 247 L--------QTGHSFSADIWSVGCTVIEMVTGKAPWSQQYKEVAAIFFIGTTKSHPPIPD 298
Query: 664 VDSSHRMTKEARDFICACLKSNPDDRLEALDLMNYNFV 777
SS +A+DF+ CL+ P+ R A +L+ + FV
Sbjct: 299 TLSS-----DAKDFLLKCLQEVPNLRPTASELLKHPFV 331
>sp|Q9FZ36|M3K2_ARATH Mitogen-activated protein kinase kinase kinase 2 (Arabidospsis
NPK1-related protein kinase 2)
Length = 651
Score = 149 bits (375), Expect = 1e-35
Identities = 97/278 (34%), Positives = 156/278 (56%), Gaps = 19/278 (6%)
Frame = +1
Query: 1 LIGQGHAGTVYKVCNLDTMEIMAMKEIVIN---------EPFSQDLIE-CDLLCKLNHTS 150
LIG+G GTVY NLD+ E++A+K+++I + Q+L E LL L+H +
Sbjct: 73 LIGRGAFGTVYMGMNLDSGELLAVKQVLITSNCASKEKTQAHIQELEEEVKLLKNLSHPN 132
Query: 151 LLKYYGVDISLSHMRIFTEYCESGSLSQVSILD----IPEINLRQWTKQILEAIVHLHNH 318
+++Y G + I E+ GS+S S+L+ PE +R +T Q+L + +LHNH
Sbjct: 133 IVRYLGTVREDETLNILLEFVPGGSIS--SLLEKFGAFPESVVRTYTNQLLLGLEYLHNH 190
Query: 319 KIVHRDVKPDNIFLKNIQDTNECHAKLGDFGVAKCLSHQ---DGLKDIKGTVMYMAPEVV 489
I+HRD+K NI + D C KL DFG +K ++ G K +KGT +MAPEV+
Sbjct: 191 AIMHRDIKGANILV----DNQGC-IKLADFGASKQVAELATISGAKSMKGTPYWMAPEVI 245
Query: 490 VVDSEQNKSKSGYNHKVDIWSLGCMVLYMITGKPPWDENH-QLAIYYNLG-NKKLPQIPE 663
+ ++G++ DIWS+GC V+ M+TGK PW + + ++A +++G K P IP+
Sbjct: 246 L--------QTGHSFSADIWSVGCTVIEMVTGKAPWSQQYKEIAAIFHIGTTKSHPPIPD 297
Query: 664 VDSSHRMTKEARDFICACLKSNPDDRLEALDLMNYNFV 777
++ +A DF+ CL+ P+ R A +L+ + FV
Sbjct: 298 -----NISSDANDFLLKCLQQEPNLRPTASELLKHPFV 330
>sp|O22042|M3K3_ARATH Mitogen-activated protein kinase kinase kinase 3 (Arabidospsis
NPK1-related protein kinase 3)
Length = 651
Score = 148 bits (373), Expect = 2e-35
Identities = 99/276 (35%), Positives = 151/276 (54%), Gaps = 17/276 (6%)
Frame = +1
Query: 1 LIGQGHAGTVYKVCNLDTMEIMAMKEIVI-----NEPFSQDLI-----ECDLLCKLNHTS 150
LIG G G VY NLD+ E++A+K+++I ++ +Q I E LL L+H +
Sbjct: 73 LIGCGAFGRVYMGMNLDSGELLAIKQVLIAPSSASKEKTQGHIRELEEEVQLLKNLSHPN 132
Query: 151 LLKYYGVDISLSHMRIFTEYCESGSLSQV--SILDIPEINLRQWTKQILEAIVHLHNHKI 324
+++Y G + I E+ GS+S + PE + +TKQ+L + +LHN+ I
Sbjct: 133 IVRYLGTVRESDSLNILMEFVPGGSISSLLEKFGSFPEPVIIMYTKQLLLGLEYLHNNGI 192
Query: 325 VHRDVKPDNIFLKNIQDTNECHAKLGDFGVAKC---LSHQDGLKDIKGTVMYMAPEVVVV 495
+HRD+K NI + D C +L DFG +K L+ +G K +KGT +MAPEV++
Sbjct: 193 MHRDIKGANILV----DNKGC-IRLADFGASKKVVELATVNGAKSMKGTPYWMAPEVIL- 246
Query: 496 DSEQNKSKSGYNHKVDIWSLGCMVLYMITGKPPWDENH-QLAIYYNLGNKKL-PQIPEVD 669
++G++ DIWS+GC V+ M TGKPPW E + Q A ++G K P IPE
Sbjct: 247 -------QTGHSFSADIWSVGCTVIEMATGKPPWSEQYQQFAAVLHIGRTKAHPPIPE-- 297
Query: 670 SSHRMTKEARDFICACLKSNPDDRLEALDLMNYNFV 777
++ EA+DF+ CL P RL A +L+ + FV
Sbjct: 298 ---DLSPEAKDFLMKCLHKEPSLRLSATELLQHPFV 330
>sp|P25390|SSK22_YEAST Serine/threonine-protein kinase SSK22 (MAP kinase kinase kinase
SSK22) (Suppressor of sensor kinase 22)
Length = 1331
Score = 147 bits (372), Expect = 3e-35
Identities = 102/281 (36%), Positives = 152/281 (54%), Gaps = 28/281 (9%)
Frame = +1
Query: 4 IGQGHAGTVYKVCNLDTMEIMAMKEIVINEPFSQDLI------ECDLLCKLNHTSLLKYY 165
IG G G VY NL+ EI+A+KEI I++ + I E +L LNH ++++YY
Sbjct: 1040 IGGGTFGQVYSAINLENGEILAVKEIKIHDTTTMKKIFPLIKEEMTVLEMLNHPNIVQYY 1099
Query: 166 GVDISLSHMRIFTEYCESGSLSQVSILD----IPEINLRQWTKQILEAIVHLHNHKIVHR 333
GV++ + IF EYCE GSL+ S+LD E+ + +T ++LE + +LH +VHR
Sbjct: 1100 GVEVHRDKVNIFMEYCEGGSLA--SLLDHGRIEDEMVTQVYTFELLEGLAYLHQSGVVHR 1157
Query: 334 DVKPDNIFLKNIQDTNECHAKLGDFGVAKCL-----------SHQD------GLKDIKGT 462
D+KP+NI L D N K DFG A+ + + QD L ++ GT
Sbjct: 1158 DIKPENILL----DFNGI-IKYVDFGTARTVVGSRTRTVRNAAVQDFGVETKSLNEMMGT 1212
Query: 463 VMYMAPEVVVVDSEQNKSKSGYNHKVDIWSLGCMVLYMITGKPPWDE-NHQLAIYYNLGN 639
MYMAPE + K K G + D+W+LGC+VL M TG+ PW +++ AI Y++
Sbjct: 1213 PMYMAPE--TISGSAVKGKLGAD---DVWALGCVVLEMATGRRPWSNLDNEWAIMYHVAA 1267
Query: 640 KKLPQIPEVDSSHRMTKEARDFICACLKSNPDDRLEALDLM 762
++PQ+P D MT R F+ CL +P R A++L+
Sbjct: 1268 GRIPQLPNRD---EMTAAGRAFLERCLVQDPTMRATAVELL 1305
>sp|O14299|WIS4_SCHPO MAP kinase kinase kinase wis4 (MAP kinase kinase kinase wak1) (MAP
kinase kinase kinase wik1)
Length = 1401
Score = 145 bits (365), Expect = 2e-34
Identities = 93/280 (33%), Positives = 153/280 (54%), Gaps = 22/280 (7%)
Frame = +1
Query: 4 IGQGHAGTVYKVCNLDTMEIMAMKEIVINEP------FSQDLIECDLLCKLNHTSLLKYY 165
+ G G VY N++T +++A+KEI + + Q E +L +LNH +++ YY
Sbjct: 1043 VRSGMFGDVYTGVNMETGDLLAVKEIKLQDSRTFRSTVDQIHNEMTVLERLNHPNVVTYY 1102
Query: 166 GVDISLSHMRIFTEYCESGSLSQV----SILDIPEINLRQWTKQILEAIVHLHNHKIVHR 333
GV++ + IF E+C+ GSL+ + I D E L+ + Q+LE + ++H+ I+HR
Sbjct: 1103 GVEVHREKVYIFMEFCQGGSLADLLAHGRIED--ENVLKVYVVQLLEGLAYIHSQHILHR 1160
Query: 334 DVKPDNIFLKNIQDTNECHAKLGDFGVAKCLSH-----------QDGLKDIKGTVMYMAP 480
D+KP NI L + K DFG A +S Q L+ + GT MYMAP
Sbjct: 1161 DIKPANILL-----DHRGMIKYSDFGSALYVSPPTDPEVRYEDIQPELQHLAGTPMYMAP 1215
Query: 481 EVVVVDSEQNKSKSGYNHKVDIWSLGCMVLYMITGKPPWDE-NHQLAIYYNLGNKKLPQI 657
E+++ +K G +DIWSLGC++L M+TG PW E +++ AI Y++ P I
Sbjct: 1216 EIIL------GTKKGDFGAMDIWSLGCVILEMMTGSTPWSEMDNEWAIMYHVAAMHTPSI 1269
Query: 658 PEVDSSHRMTKEARDFICACLKSNPDDRLEALDLMNYNFV 777
P+ + +++ ARDFI C + +P+ R A+DL+ + ++
Sbjct: 1270 PQ---NEKISSLARDFIEQCFERDPEQRPRAVDLLTHPWI 1306
>sp|P53599|SSK2_YEAST MAP kinase kinase kinase SSK2 (Suppressor of sensor kinase 2)
Length = 1579
Score = 143 bits (361), Expect = 5e-34
Identities = 107/297 (36%), Positives = 148/297 (49%), Gaps = 44/297 (14%)
Frame = +1
Query: 4 IGQGHAGTVYKVCNLDTMEIMAMKEIVINEPFSQDLI------ECDLLCKLNHTSLLKYY 165
IG G G VY +LD EI+A+KEI I + S I E +L LNH +++ YY
Sbjct: 1272 IGGGTFGRVYSAVDLDNGEILAVKEINIQDSKSMQKIFPLIKEEMSVLEILNHPNIVSYY 1331
Query: 166 GVDISLSHMRIFTEYCESGSLSQV----SILDIPEINLRQWTKQILEAIVHLHNHKIVHR 333
GV++ + IF EYCE GSL+ + I D E+ + +T Q+LE + +LH IVHR
Sbjct: 1332 GVEVHRDKVNIFMEYCEGGSLAALLEHGRIED--EMVTQVYTLQLLEGLAYLHESGIVHR 1389
Query: 334 DVKPDNIFLKNIQDTNECHAKLGDFGVAKCLS------------------HQD------- 438
DVKP+NI L D N K DFG AK ++ H+D
Sbjct: 1390 DVKPENILL----DFNGV-IKYVDFGAAKKIANNGTRLASMNKIENADGEHEDVTHVSDS 1444
Query: 439 --------GLKDIKGTVMYMAPEVVVVDSEQNKSKSGYNHKVDIWSLGCMVLYMITGKPP 594
L D+ GT MYMAPE + K K G + D+WSLGC+VL MITG+ P
Sbjct: 1445 KAVKNNENALLDMMGTPMYMAPESIT--GSTTKGKLGAD---DVWSLGCVVLEMITGRRP 1499
Query: 595 W-DENHQLAIYYNLGNKKLPQIPEVDSSHRMTKEARDFICACLKSNPDDRLEALDLM 762
W + +++ AI Y++ PQ P D ++ F+ CL NP R A++L+
Sbjct: 1500 WANLDNEWAIMYHVAAGHTPQFPTKD---EVSSAGMKFLERCLIQNPSKRASAVELL 1553
>sp|Q10407|MKH1_SCHPO MAP kinase kinase kinase mkh1
Length = 1116
Score = 140 bits (353), Expect = 4e-33
Identities = 90/281 (32%), Positives = 155/281 (55%), Gaps = 21/281 (7%)
Frame = +1
Query: 1 LIGQGHAGTVYKVCNLDTMEIMAMKEIVI-------NEPFSQDLI-----ECDLLCKLNH 144
LIG G G V+ N++T E++A+K++ I ++ +D++ E ++ L+H
Sbjct: 830 LIGNGTYGKVFLAMNINTGELIAVKQVEIPQTINGRHDQLRKDIVDSINAEISMIADLDH 889
Query: 145 TSLLKYYGVDISLSHMRIFTEYCESGSLSQV--SILDIPEINLRQWTKQILEAIVHLHNH 318
++++Y G + + + + IF EY GS+ + + E +R ++Q+L + +LH+
Sbjct: 890 LNIVQYLGFEKTETDISIFLEYVSGGSIGRCLRNYGPFEEQLVRFVSRQVLYGLSYLHSK 949
Query: 319 KIVHRDVKPDNIFLKNIQDTNECHAKLGDFGVAKCLSHQDGLKD------IKGTVMYMAP 480
I+HRD+K DN+ I C K+ DFG++K H D + D ++G++ +MAP
Sbjct: 950 GIIHRDLKADNLL---IDFDGVC--KISDFGISK---HSDNVYDNDANLSMQGSIFWMAP 1001
Query: 481 EVVVVDSEQNKSKSGYNHKVDIWSLGCMVLYMITGKPPWDENHQLAIYYNLG-NKKLPQI 657
EV+ D + GY+ KVD+WSLGC+VL M+ G+ PW + + + LG KK P I
Sbjct: 1002 EVIHNDHQ------GYSAKVDVWSLGCVVLEMLAGRRPWSTDEAIQAMFKLGTEKKAPPI 1055
Query: 658 PEVDSSHRMTKEARDFICACLKSNPDDRLEALDLMNYNFVK 780
P + +++ EA F+ AC N D R A +L+N+ F+K
Sbjct: 1056 PS-ELVSQVSPEAIQFLNACFTVNADVRPTAEELLNHPFMK 1095
>sp|Q01389|BCK1_YEAST Serine/threonine-protein kinase BCK1/SLK1/SSP31
Length = 1478
Score = 138 bits (348), Expect = 2e-32
Identities = 88/273 (32%), Positives = 149/273 (54%), Gaps = 15/273 (5%)
Frame = +1
Query: 1 LIGQGHAGTVYKVCNLDTMEIMAMKEIVINEPFSQDLI----------ECDLLCKLNHTS 150
+IG+G G VY N+ T E+MA+K++ + + SQ+ E L L+H +
Sbjct: 1180 MIGKGSFGAVYLCLNVTTGEMMAVKQVEVPKYSSQNEAILSTVEALRSEVSTLKDLDHLN 1239
Query: 151 LLKYYGVDISLSHMRIFTEYCESGSLSQVSIL--DIPEINLRQWTKQILEAIVHLHNHKI 324
+++Y G + + +F EY GS+ + + E ++ T Q+L+ + +LH+ I
Sbjct: 1240 IVQYLGFENKNNIYSLFLEYVAGGSVGSLIRMYGRFDEPLIKHLTTQVLKGLAYLHSKGI 1299
Query: 325 VHRDVKPDNIFLKNIQDTNECHAKLGDFGVAKCLS--HQDGLKDIKGTVMYMAPEVVVVD 498
+HRD+K DN+ L + K+ DFG+++ + + ++GTV +MAPE+V
Sbjct: 1300 LHRDMKADNLLLDQ-----DGICKISDFGISRKSKDIYSNSDMTMRGTVFWMAPEMV--- 1351
Query: 499 SEQNKSKSGYNHKVDIWSLGCMVLYMITGKPPWDENHQLAIYYNLG-NKKLPQIPEVDSS 675
+K GY+ KVDIWSLGC+VL M GK PW +A + +G +K P IPE D+
Sbjct: 1352 ----DTKQGYSAKVDIWSLGCIVLEMFAGKRPWSNLEVVAAMFKIGKSKSAPPIPE-DTL 1406
Query: 676 HRMTKEARDFICACLKSNPDDRLEALDLMNYNF 774
+++ R+F+ AC + NP+ R A +L+++ F
Sbjct: 1407 PLISQIGRNFLDACFEINPEKRPTANELLSHPF 1439
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,484,208
Number of Sequences: 369166
Number of extensions: 2131760
Number of successful extensions: 9474
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7012
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8390082510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)