Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_008_H10
(465 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P31167|ADT1_ARATH ADP,ATP carrier protein 1, mitochondri... 150 1e-36
sp|Q41629|ADT1_WHEAT ADP,ATP carrier protein 1, mitochondri... 150 2e-36
sp|P27081|ADT2_SOLTU ADP,ATP carrier protein, mitochondrial... 149 2e-36
sp|P31691|ADT_ORYSA ADP,ATP carrier protein, mitochondrial ... 149 3e-36
sp|O22342|ADT1_GOSHI ADP,ATP carrier protein 1, mitochondri... 148 5e-36
sp|P25083|ADT1_SOLTU ADP,ATP carrier protein, mitochondrial... 148 7e-36
sp|P40941|ADT2_ARATH ADP,ATP carrier protein 2, mitochondri... 147 1e-35
sp|P04709|ADT1_MAIZE ADP,ATP carrier protein 1, mitochondri... 147 1e-35
sp|P12857|ADT2_MAIZE ADP,ATP carrier protein 2, mitochondri... 147 1e-35
sp|P27080|ADT_CHLRE ADP,ATP carrier protein (ADP/ATP transl... 145 6e-35
>sp|P31167|ADT1_ARATH ADP,ATP carrier protein 1, mitochondrial precursor (ADP/ATP
translocase 1) (Adenine nucleotide translocator 1) (ANT
1)
Length = 381
Score = 150 bits (379), Expect = 1e-36
Identities = 77/130 (59%), Positives = 92/130 (70%), Gaps = 2/130 (1%)
Frame = +2
Query: 2 TYKSDGLPGLYRGFVISCVGIIVYRGCYFGFYDTLKPLLLGKDA--GVFACFILGYAVTV 175
T K+DG+ GLYRGF ISCVGIIVYRG YFG YD++KP+LL D FA F LG+ +T
Sbjct: 239 TLKTDGIAGLYRGFNISCVGIIVYRGLYFGLYDSVKPVLLTGDLQDSFFASFALGWVITN 298
Query: 176 TSGLISYPIDTIRRRMMMTSGQAVKYKGSIDCMIHILKHEGFMAYMKGAGANILRXXXXX 355
+GL SYPIDT+RRRMMMTSG+AVKYK S+D ILK+EG + KGAGANILR
Sbjct: 299 GAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFKQILKNEGAKSLFKGAGANILRAVAGA 358
Query: 356 XXXXXFDKFK 385
+DK +
Sbjct: 359 GVLSGYDKLQ 368
Score = 33.9 bits (76), Expect = 0.18
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Frame = +2
Query: 149 FILGYAVTVTSGLISYPIDTIRRRM-----MMTSGQAVK-YKGSIDCMIHILKHEGFMAY 310
F++G S + PI+ ++ + M+ +G+ + YKG DC +K EGF +
Sbjct: 84 FLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFGSL 143
Query: 311 MKGAGANILRXXXXXXXXXXF-DKFKDLY 394
+G AN++R F D FK L+
Sbjct: 144 WRGNTANVIRYFPTQALNFAFKDYFKRLF 172
>sp|Q41629|ADT1_WHEAT ADP,ATP carrier protein 1, mitochondrial precursor (ADP/ATP
translocase 1) (Adenine nucleotide translocator 1) (ANT
1)
Length = 331
Score = 150 bits (378), Expect = 2e-36
Identities = 79/133 (59%), Positives = 93/133 (69%), Gaps = 2/133 (1%)
Frame = +2
Query: 2 TYKSDGLPGLYRGFVISCVGIIVYRGCYFGFYDTLKPLLLGKDAGV--FACFILGYAVTV 175
T KSDG+ GLYRGF ISCVGIIVYRG YFG YD+LKP+LL V FA F LG+ +T
Sbjct: 189 TLKSDGIAGLYRGFNISCVGIIVYRGLYFGLYDSLKPVLLTGTLQVCFFASFALGWLITN 248
Query: 176 TSGLISYPIDTIRRRMMMTSGQAVKYKGSIDCMIHILKHEGFMAYMKGAGANILRXXXXX 355
+GL SYPIDT+RRRMMMTSG+AVKYK S+D ILK EG + KGAGANILR
Sbjct: 249 GAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFQQILKKEGAKSLFKGAGANILRAIAGA 308
Query: 356 XXXXXFDKFKDLY 394
+D+ + L+
Sbjct: 309 GVLSGYDQLQILF 321
Score = 33.1 bits (74), Expect = 0.32
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Frame = +2
Query: 149 FILGYAVTVTSGLISYPIDTIRRRM-----MMTSGQAVK-YKGSIDCMIHILKHEGFMAY 310
F++G S + PI+ ++ + M+ +G+ + YKG DC +K EGF +
Sbjct: 35 FLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFGSL 94
Query: 311 MKGAGANILRXXXXXXXXXXF-DKFKDLY 394
+G AN++R F D FK ++
Sbjct: 95 WRGNTANVIRYFPTQALNFAFKDYFKRMF 123
>sp|P27081|ADT2_SOLTU ADP,ATP carrier protein, mitochondrial precursor (ADP/ATP
translocase) (Adenine nucleotide translocator) (ANT)
Length = 386
Score = 149 bits (377), Expect = 2e-36
Identities = 79/130 (60%), Positives = 93/130 (71%), Gaps = 2/130 (1%)
Frame = +2
Query: 2 TYKSDGLPGLYRGFVISCVGIIVYRGCYFGFYDTLKPLLL-GK-DAGVFACFILGYAVTV 175
T KSDG+ GLYRGF ISCVGIIVYRG YFG YD+LKP+LL GK + FA F LG+ +T
Sbjct: 244 TLKSDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKMEDSFFASFALGWLITN 303
Query: 176 TSGLISYPIDTIRRRMMMTSGQAVKYKGSIDCMIHILKHEGFMAYMKGAGANILRXXXXX 355
+GL SYPIDT+RRRMMMTSG+AVKYK S D ILK+EG + KGAGAN+LR
Sbjct: 304 GAGLASYPIDTVRRRMMMTSGEAVKYKSSFDAFNQILKNEGPKSLFKGAGANVLRAVAGA 363
Query: 356 XXXXXFDKFK 385
+DK +
Sbjct: 364 GVLAGYDKLQ 373
Score = 36.6 bits (83), Expect = 0.028
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Frame = +2
Query: 149 FILGYAVTVTSGLISYPIDTIRRRM-----MMTSGQAVK-YKGSIDCMIHILKHEGFMAY 310
F++G S + PI+ ++ + M+ +G+ + YKG DC +K EGF A
Sbjct: 89 FLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFSRTIKDEGFAAL 148
Query: 311 MKGAGANILRXXXXXXXXXXF-DKFKDLY 394
+G AN++R F D FK L+
Sbjct: 149 WRGNTANVIRYFPTQALNFAFKDYFKRLF 177
>sp|P31691|ADT_ORYSA ADP,ATP carrier protein, mitochondrial precursor (ADP/ATP
translocase) (Adenine nucleotide translocator) (ANT)
Length = 382
Score = 149 bits (376), Expect = 3e-36
Identities = 77/133 (57%), Positives = 93/133 (69%), Gaps = 2/133 (1%)
Frame = +2
Query: 2 TYKSDGLPGLYRGFVISCVGIIVYRGCYFGFYDTLKPLLL--GKDAGVFACFILGYAVTV 175
T KSDG+ GLYRGF ISCVGIIVYRG YFG YD+LKP++L FA F LG+ +T
Sbjct: 240 TLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGSLQDNFFASFALGWLITN 299
Query: 176 TSGLISYPIDTIRRRMMMTSGQAVKYKGSIDCMIHILKHEGFMAYMKGAGANILRXXXXX 355
+GL SYPIDT+RRRMMMTSG+AVKYK S+D ILK+EG + KGAGANILR
Sbjct: 300 GAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFSQILKNEGAKSLFKGAGANILRAIAGA 359
Query: 356 XXXXXFDKFKDLY 394
+D+ + L+
Sbjct: 360 GVLSGYDQLQILF 372
Score = 34.7 bits (78), Expect = 0.11
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Frame = +2
Query: 149 FILGYAVTVTSGLISYPIDTIRRRM-----MMTSGQAVK-YKGSIDCMIHILKHEGFMAY 310
F++G S + PI+ ++ + M+ +G+ + YKG DC +K EGF +
Sbjct: 86 FLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFGRTIKDEGFASL 145
Query: 311 MKGAGANILRXXXXXXXXXXF-DKFKDLY 394
+G AN++R F D FK L+
Sbjct: 146 WRGNTANVIRYFPTQALNFAFKDYFKRLF 174
>sp|O22342|ADT1_GOSHI ADP,ATP carrier protein 1, mitochondrial precursor (ADP/ATP
translocase 1) (Adenine nucleotide translocator 1) (ANT
1)
Length = 386
Score = 148 bits (374), Expect = 5e-36
Identities = 76/130 (58%), Positives = 91/130 (70%), Gaps = 2/130 (1%)
Frame = +2
Query: 2 TYKSDGLPGLYRGFVISCVGIIVYRGCYFGFYDTLKPLLL--GKDAGVFACFILGYAVTV 175
T KSDG+ GLYRGF ISCVGIIVYRG YFG YD+LKP+LL FA F+LG+ +T
Sbjct: 244 TLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSMQDSFFASFVLGWLITN 303
Query: 176 TSGLISYPIDTIRRRMMMTSGQAVKYKGSIDCMIHILKHEGFMAYMKGAGANILRXXXXX 355
+ L SYPIDT+RRRMMMTSG+AVKYK S+D ILK+EG + KGAG+NILR
Sbjct: 304 GAALASYPIDTVRRRMMMTSGKAVKYKSSLDAFSQILKNEGGKSLFKGAGSNILRAIAGA 363
Query: 356 XXXXXFDKFK 385
+DK +
Sbjct: 364 GVLAGYDKLQ 373
Score = 35.4 bits (80), Expect = 0.063
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Frame = +2
Query: 149 FILGYAVTVTSGLISYPIDTIRRRM-----MMTSGQAVK-YKGSIDCMIHILKHEGFMAY 310
F++G S + PI+ ++ + M+ SG+ + YKG DC +K EGF +
Sbjct: 90 FLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTIKDEGFGSL 149
Query: 311 MKGAGANILRXXXXXXXXXXF-DKFKDLY 394
+G AN++R F D FK L+
Sbjct: 150 WRGNTANVIRYFPTQALNFAFKDYFKRLF 178
Score = 28.9 bits (63), Expect = 5.9
Identities = 31/117 (26%), Positives = 45/117 (38%), Gaps = 11/117 (9%)
Frame = +2
Query: 2 TYKSDGLPGLYRGFVISCVGIIVYRGCYFGFYDTLKPLL-LGKDA-GVFACF----ILGY 163
T K +G L+RG + + + F F D K L KD G + F G
Sbjct: 140 TIKDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGG 199
Query: 164 AVTVTSGLISYPIDTIRRRMMMTSGQAVK-----YKGSIDCMIHILKHEGFMAYMKG 319
A +S L Y +D R R+ + A K + G +D LK +G +G
Sbjct: 200 AAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLKSDGIAGLYRG 256
>sp|P25083|ADT1_SOLTU ADP,ATP carrier protein, mitochondrial precursor (ADP/ATP
translocase) (Adenine nucleotide translocator) (ANT)
Length = 386
Score = 148 bits (373), Expect = 7e-36
Identities = 78/132 (59%), Positives = 93/132 (70%), Gaps = 2/132 (1%)
Frame = +2
Query: 2 TYKSDGLPGLYRGFVISCVGIIVYRGCYFGFYDTLKPLLLGKDA--GVFACFILGYAVTV 175
T KSDG+ GLYRGF ISCVGIIVYRG YFG YD+LKP+LL + FA F LG+ +T
Sbjct: 244 TLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGNLQDSFFASFGLGWLITN 303
Query: 176 TSGLISYPIDTIRRRMMMTSGQAVKYKGSIDCMIHILKHEGFMAYMKGAGANILRXXXXX 355
+GL SYPIDT+RRRMMMTSG+AVKYK S+D I+K+EG + KGAGANILR
Sbjct: 304 GAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQIVKNEGPKSLFKGAGANILRAVAGA 363
Query: 356 XXXXXFDKFKDL 391
+DK + L
Sbjct: 364 GVLAGYDKLQVL 375
Score = 33.1 bits (74), Expect = 0.32
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Frame = +2
Query: 149 FILGYAVTVTSGLISYPIDTIRRRM-----MMTSGQAVK-YKGSIDCMIHILKHEGFMAY 310
F++G S + PI+ ++ + M+ +G+ + YKG +C +K EGF +
Sbjct: 90 FLMGGVSAAVSKTAAAPIERVKLLIQNQDEMLKAGRLSEPYKGIGECFGRTIKEEGFGSL 149
Query: 311 MKGAGANILRXXXXXXXXXXF-DKFKDLY 394
+G AN++R F D FK L+
Sbjct: 150 WRGNTANVIRYFPTQALNFAFKDYFKRLF 178
>sp|P40941|ADT2_ARATH ADP,ATP carrier protein 2, mitochondrial precursor (ADP/ATP
translocase 2) (Adenine nucleotide translocator 2) (ANT
2)
Length = 385
Score = 147 bits (371), Expect = 1e-35
Identities = 76/130 (58%), Positives = 89/130 (68%), Gaps = 2/130 (1%)
Frame = +2
Query: 2 TYKSDGLPGLYRGFVISCVGIIVYRGCYFGFYDTLKPLLLGKDA--GVFACFILGYAVTV 175
T KSDG+ GLYRGF ISC GIIVYRG YFG YD++KP+LL D FA F LG+ +T
Sbjct: 243 TLKSDGIAGLYRGFNISCAGIIVYRGLYFGLYDSVKPVLLTGDLQDSFFASFALGWLITN 302
Query: 176 TSGLISYPIDTIRRRMMMTSGQAVKYKGSIDCMIHILKHEGFMAYMKGAGANILRXXXXX 355
+GL SYPIDT+RRRMMMTSG+AVKYK S D I+K EG + KGAGANILR
Sbjct: 303 GAGLASYPIDTVRRRMMMTSGEAVKYKSSFDAFSQIVKKEGAKSLFKGAGANILRAVAGA 362
Query: 356 XXXXXFDKFK 385
+DK +
Sbjct: 363 GVLAGYDKLQ 372
Score = 31.6 bits (70), Expect = 0.92
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Frame = +2
Query: 149 FILGYAVTVTSGLISYPIDTIRRRM-----MMTSGQAVK-YKGSIDCMIHILKHEGFMAY 310
F++G S + PI+ ++ + M+ +G+ + YKG DC ++ EG +
Sbjct: 88 FMMGGVSAAVSKTAAAPIERVKLLIQNQDEMLKAGRLTEPYKGIRDCFGRTIRDEGIGSL 147
Query: 311 MKGAGANILRXXXXXXXXXXF-DKFKDLY 394
+G AN++R F D FK L+
Sbjct: 148 WRGNTANVIRYFPTQALNFAFKDYFKRLF 176
Score = 29.6 bits (65), Expect = 3.5
Identities = 31/118 (26%), Positives = 46/118 (38%), Gaps = 12/118 (10%)
Frame = +2
Query: 2 TYKSDGLPGLYRGFVISCVGIIVYRGCYFGFYDTLKPLL-LGKDA-GVFACF----ILGY 163
T + +G+ L+RG + + + F F D K L KD G + F G
Sbjct: 138 TIRDEGIGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDKDGYWKWFAGNLASGG 197
Query: 164 AVTVTSGLISYPIDTIRRRMMMTSGQAVK------YKGSIDCMIHILKHEGFMAYMKG 319
A +S L Y +D R R+ S A K + G +D LK +G +G
Sbjct: 198 AAGASSLLFVYSLDYARTRLANDSKSAKKGGGERQFNGLVDVYKKTLKSDGIAGLYRG 255
>sp|P04709|ADT1_MAIZE ADP,ATP carrier protein 1, mitochondrial precursor (ADP/ATP
translocase 1) (Adenine nucleotide translocator 1) (ANT
1)
Length = 387
Score = 147 bits (370), Expect = 1e-35
Identities = 76/133 (57%), Positives = 93/133 (69%), Gaps = 2/133 (1%)
Frame = +2
Query: 2 TYKSDGLPGLYRGFVISCVGIIVYRGCYFGFYDTLKPLLLGKDA--GVFACFILGYAVTV 175
T KSDG+ GLYRGF ISCVGIIVYRG YFG YD++KP++L + FA F LG+ +T
Sbjct: 245 TLKSDGIAGLYRGFNISCVGIIVYRGLYFGLYDSIKPVVLTGNLQDNFFASFALGWLITN 304
Query: 176 TSGLISYPIDTIRRRMMMTSGQAVKYKGSIDCMIHILKHEGFMAYMKGAGANILRXXXXX 355
+GL SYPIDT+RRRMMMTSG+AVKYK S+D ILK EG + KGAGANILR
Sbjct: 305 GAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFQQILKKEGPKSLFKGAGANILRAIAGA 364
Query: 356 XXXXXFDKFKDLY 394
+D+ + L+
Sbjct: 365 GVLSGYDQLQILF 377
Score = 38.5 bits (88), Expect = 0.007
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Frame = +2
Query: 149 FILGYAVTVTSGLISYPIDTIRRRM-----MMTSGQAVK-YKGSIDCMIHILKHEGFMAY 310
F++G S + PI+ ++ + M+ SG+ + YKG +DC +K EGF +
Sbjct: 91 FMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIVDCFKRTIKDEGFSSL 150
Query: 311 MKGAGANILRXXXXXXXXXXF-DKFKDLY 394
+G AN++R F D FK L+
Sbjct: 151 WRGNTANVIRYFPTQALNFAFKDYFKRLF 179
>sp|P12857|ADT2_MAIZE ADP,ATP carrier protein 2, mitochondrial precursor (ADP/ATP
translocase 2) (Adenine nucleotide translocator 2) (ANT
2)
Length = 387
Score = 147 bits (370), Expect = 1e-35
Identities = 76/133 (57%), Positives = 92/133 (69%), Gaps = 2/133 (1%)
Frame = +2
Query: 2 TYKSDGLPGLYRGFVISCVGIIVYRGCYFGFYDTLKPLLL--GKDAGVFACFILGYAVTV 175
T KSDG+ GLYRGF ISCVGIIVYRG YFG YD++KP++L FA F LG+ +T
Sbjct: 245 TLKSDGIAGLYRGFNISCVGIIVYRGLYFGLYDSIKPVVLTGSLQDNFFASFALGWLITN 304
Query: 176 TSGLISYPIDTIRRRMMMTSGQAVKYKGSIDCMIHILKHEGFMAYMKGAGANILRXXXXX 355
+GL SYPIDT+RRRMMMTSG+AVKYK S+D ILK EG + KGAGANILR
Sbjct: 305 GAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFQQILKKEGPKSLFKGAGANILRAIAGA 364
Query: 356 XXXXXFDKFKDLY 394
+D+ + L+
Sbjct: 365 GVLSGYDQLQILF 377
Score = 37.0 bits (84), Expect = 0.022
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Frame = +2
Query: 149 FILGYAVTVTSGLISYPIDTIRRRM-----MMTSGQAVK-YKGSIDCMIHILKHEGFMAY 310
F++G S + PI+ ++ + M+ SG+ + YKG DC +K EGF +
Sbjct: 91 FMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIADCFKRTIKDEGFSSL 150
Query: 311 MKGAGANILRXXXXXXXXXXF-DKFKDLY 394
+G AN++R F D FK L+
Sbjct: 151 WRGNTANVIRYFPTQALNFAFKDYFKRLF 179
>sp|P27080|ADT_CHLRE ADP,ATP carrier protein (ADP/ATP translocase) (Adenine nucleotide
translocator) (ANT)
Length = 308
Score = 145 bits (365), Expect = 6e-35
Identities = 75/130 (57%), Positives = 91/130 (70%), Gaps = 2/130 (1%)
Frame = +2
Query: 2 TYKSDGLPGLYRGFVISCVGIIVYRGCYFGFYDTLKPLLL-GKDAGVF-ACFILGYAVTV 175
T SDG+ GLYRGF ISCVGI+VYRG YFG YD+LKP++L G A F A F+LG+ +T+
Sbjct: 166 TIASDGIAGLYRGFNISCVGIVVYRGLYFGMYDSLKPVVLVGPLANNFLAAFLLGWGITI 225
Query: 176 TSGLISYPIDTIRRRMMMTSGQAVKYKGSIDCMIHILKHEGFMAYMKGAGANILRXXXXX 355
+GL SYPIDTIRRRMMMTSG AVKY S C I+K+EG + KGAGANILR
Sbjct: 226 GAGLASYPIDTIRRRMMMTSGSAVKYNSSFHCFQEIVKNEGMKSLFKGAGANILRAVAGA 285
Query: 356 XXXXXFDKFK 385
+D+ +
Sbjct: 286 GVLAGYDQLQ 295
Score = 35.0 bits (79), Expect = 0.083
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Frame = +2
Query: 149 FILGYAVTVTSGLISYPIDTIRRRM-----MMTSGQ-AVKYKGSIDCMIHILKHEGFMAY 310
F+ G S + PI+ ++ + M+ G+ A YKG +C + ++ EGF +
Sbjct: 12 FLAGGLSAAVSKTAAAPIERVKLLIQNQDEMIKQGRLASPYKGIGECFVRTVREEGFGSL 71
Query: 311 MKGAGANILRXXXXXXXXXXF-DKFKDLY 394
+G AN++R F DKFK ++
Sbjct: 72 WRGNTANVIRYFPTQALNFAFKDKFKRMF 100
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,154,154
Number of Sequences: 369166
Number of extensions: 988088
Number of successful extensions: 3032
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2916
length of database: 68,354,980
effective HSP length: 101
effective length of database: 49,696,745
effective search space used: 2633927485
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)