Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_008_G14
(811 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P24643|CALX_CANFA Calnexin precursor (pp90) 220 3e-57
sp|P35565|CALX_RAT Calnexin precursor 218 2e-56
sp|P35564|CALX_MOUSE Calnexin precursor 218 2e-56
sp|Q5R440|CALX_PONPY Calnexin precursor 217 3e-56
sp|P27824|CALX_HUMAN Calnexin precursor (Major histocompati... 216 5e-56
sp|P52194|CLGN_MOUSE Calmegin precursor (MEG 1 antigen) (Ca... 187 4e-47
sp|Q38798|CALX2_ARATH Calnexin homolog 2 precursor 183 6e-46
sp|P29402|CALX1_ARATH Calnexin homolog 1 precursor 182 7e-46
sp|Q39817|CALX_SOYBN Calnexin homolog precursor 182 7e-46
sp|O14967|CLGN_HUMAN Calmegin precursor 181 2e-45
>sp|P24643|CALX_CANFA Calnexin precursor (pp90)
Length = 593
Score = 220 bits (561), Expect = 3e-57
Identities = 98/201 (48%), Positives = 129/201 (64%)
Frame = +1
Query: 10 EPDGWLENEPLTVPDEKSEKPKDWVDEMDGEWEAPRIDNPLCKDAPGCGPWKSPKIKNPN 189
+PDGWL++EP VPD +EKP+DW ++MDGEWEAP+I NP C+ APGCG W+ P I NPN
Sbjct: 320 KPDGWLDDEPEYVPDPDAEKPEDWDEDMDGEWEAPQIANPKCESAPGCGVWQRPMIDNPN 379
Query: 190 YKGVWTAPMIDNPKYKGVWKARRIANADYFEDAQPYKMTPIGAIGLELWSMSDEIVFDNF 369
YKG W PMIDNP Y+G+WK R+I N D+FED +P+KMTP AIGLELWSM+ +I FDNF
Sbjct: 380 YKGKWKPPMIDNPNYQGIWKPRKIPNPDFFEDLEPFKMTPFSAIGLELWSMTSDIFFDNF 439
Query: 370 IIVDNKKAADDFAAETWVVKKDAERRADPNSQSVVDAIREATSERXXXXXXXXXXXXXXX 549
I+ +++ DD+A + W +KK A+ A+P VV + EA ER
Sbjct: 440 IVCGDRRVVDDWANDGWGLKKAADGAAEP---GVVGQMIEAAEERPWLWVVYVLTVALPV 496
Query: 550 XXXXXYCCRNSGSDKSAEYER 612
+CC EY++
Sbjct: 497 FLVILFCCSGKKQSSPVEYKK 517
>sp|P35565|CALX_RAT Calnexin precursor
Length = 591
Score = 218 bits (555), Expect = 2e-56
Identities = 96/201 (47%), Positives = 130/201 (64%)
Frame = +1
Query: 10 EPDGWLENEPLTVPDEKSEKPKDWVDEMDGEWEAPRIDNPLCKDAPGCGPWKSPKIKNPN 189
+P+GWL++EP +PD +EKP+DW ++MDGEWEAP+I NP C+ APGCG W+ P I NPN
Sbjct: 320 KPEGWLDDEPEYIPDPDAEKPEDWDEDMDGEWEAPQIANPKCESAPGCGVWQRPMIDNPN 379
Query: 190 YKGVWTAPMIDNPKYKGVWKARRIANADYFEDAQPYKMTPIGAIGLELWSMSDEIVFDNF 369
YKG W PMIDNP Y+G+WK R+I N D+FED +P++MTP AIGLELWSM+ +I FDNF
Sbjct: 380 YKGKWKPPMIDNPNYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDIFFDNF 439
Query: 370 IIVDNKKAADDFAAETWVVKKDAERRADPNSQSVVDAIREATSERXXXXXXXXXXXXXXX 549
II +++ DD+A + W +KK A+ A+P VV + EA ER
Sbjct: 440 IISGDRRVVDDWANDGWGLKKAADGAAEP---GVVGQMLEAAEERPWLWVVYILTVALPV 496
Query: 550 XXXXXYCCRNSGSDKSAEYER 612
+CC + EY++
Sbjct: 497 FLVILFCCSGKKQSNAMEYKK 517
>sp|P35564|CALX_MOUSE Calnexin precursor
Length = 591
Score = 218 bits (555), Expect = 2e-56
Identities = 97/201 (48%), Positives = 130/201 (64%)
Frame = +1
Query: 10 EPDGWLENEPLTVPDEKSEKPKDWVDEMDGEWEAPRIDNPLCKDAPGCGPWKSPKIKNPN 189
+P+GWL++EP +PD +EKP+DW ++MDGEWEAP+I NP C+ APGCG W+ P I NPN
Sbjct: 320 KPEGWLDDEPEYIPDPDAEKPEDWDEDMDGEWEAPQIANPKCESAPGCGVWQRPMIDNPN 379
Query: 190 YKGVWTAPMIDNPKYKGVWKARRIANADYFEDAQPYKMTPIGAIGLELWSMSDEIVFDNF 369
YKG W PMIDNP Y+G+WK R+I N D+FED +P+KMTP AIGLELWSM+ +I FDNF
Sbjct: 380 YKGKWKPPMIDNPNYQGIWKPRKIPNPDFFEDLEPFKMTPFSAIGLELWSMTSDIFFDNF 439
Query: 370 IIVDNKKAADDFAAETWVVKKDAERRADPNSQSVVDAIREATSERXXXXXXXXXXXXXXX 549
II +++ DD+A + W +KK A+ A+P VV + EA ER
Sbjct: 440 IISGDRRVVDDWANDGWGLKKAADGAAEP---GVVLQMLEAAEERPWLWVVYILTVALPV 496
Query: 550 XXXXXYCCRNSGSDKSAEYER 612
+CC + EY++
Sbjct: 497 FLVILFCCSGKKQSNAMEYKK 517
>sp|Q5R440|CALX_PONPY Calnexin precursor
Length = 592
Score = 217 bits (553), Expect = 3e-56
Identities = 97/201 (48%), Positives = 130/201 (64%)
Frame = +1
Query: 10 EPDGWLENEPLTVPDEKSEKPKDWVDEMDGEWEAPRIDNPLCKDAPGCGPWKSPKIKNPN 189
+P+GWL++EP VPD +EKP+DW ++MDGEWEAP+I NP C+ APGCG W+ P I NPN
Sbjct: 319 KPEGWLDDEPEYVPDPDAEKPEDWDEDMDGEWEAPQIANPKCESAPGCGVWQRPMIDNPN 378
Query: 190 YKGVWTAPMIDNPKYKGVWKARRIANADYFEDAQPYKMTPIGAIGLELWSMSDEIVFDNF 369
YKG W PMIDNP Y+G+WK R+I N D+FED +P++MTP AIGLELWSM+ +I FDNF
Sbjct: 379 YKGKWKPPMIDNPSYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDIFFDNF 438
Query: 370 IIVDNKKAADDFAAETWVVKKDAERRADPNSQSVVDAIREATSERXXXXXXXXXXXXXXX 549
II +++ DD+A + W +KK A+ A+P VV + EA ER
Sbjct: 439 IICADRRIVDDWANDGWGLKKAADGAAEP---GVVGQMIEAAEERPWLWVVYILTVALPV 495
Query: 550 XXXXXYCCRNSGSDKSAEYER 612
+CC + EY++
Sbjct: 496 FLVILFCCSGKKQTSAMEYKK 516
>sp|P27824|CALX_HUMAN Calnexin precursor (Major histocompatibility complex class I
antigen-binding protein p88) (p90) (IP90)
Length = 592
Score = 216 bits (551), Expect = 5e-56
Identities = 97/201 (48%), Positives = 129/201 (64%)
Frame = +1
Query: 10 EPDGWLENEPLTVPDEKSEKPKDWVDEMDGEWEAPRIDNPLCKDAPGCGPWKSPKIKNPN 189
+P+GWL++EP VPD +EKP+DW ++MDGEWEAP+I NP C+ APGCG W+ P I NPN
Sbjct: 319 KPEGWLDDEPEYVPDPDAEKPEDWDEDMDGEWEAPQIANPRCESAPGCGVWQRPVIDNPN 378
Query: 190 YKGVWTAPMIDNPKYKGVWKARRIANADYFEDAQPYKMTPIGAIGLELWSMSDEIVFDNF 369
YKG W PMIDNP Y+G+WK R+I N D+FED +P++MTP AIGLELWSM+ +I FDNF
Sbjct: 379 YKGKWKPPMIDNPSYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDIFFDNF 438
Query: 370 IIVDNKKAADDFAAETWVVKKDAERRADPNSQSVVDAIREATSERXXXXXXXXXXXXXXX 549
II +++ DD+A + W +KK A+ A+P VV + EA ER
Sbjct: 439 IICADRRIVDDWANDGWGLKKAADGAAEP---GVVGQMIEAAEERPWLWVVYILTVALPV 495
Query: 550 XXXXXYCCRNSGSDKSAEYER 612
+CC EY++
Sbjct: 496 FLVILFCCSGKKQTSGMEYKK 516
>sp|P52194|CLGN_MOUSE Calmegin precursor (MEG 1 antigen) (Calnexin-T) (A2/6)
Length = 611
Score = 187 bits (474), Expect = 4e-47
Identities = 84/165 (50%), Positives = 111/165 (67%)
Frame = +1
Query: 10 EPDGWLENEPLTVPDEKSEKPKDWVDEMDGEWEAPRIDNPLCKDAPGCGPWKSPKIKNPN 189
+PDGWL++EP +P+ K+EKP+DW D+MDGEWEAP I NP C+ GCG WK P I NP
Sbjct: 310 KPDGWLDDEPKFIPNPKAEKPEDWSDDMDGEWEAPHIPNPACQI--GCGEWKPPMIDNPK 367
Query: 190 YKGVWTAPMIDNPKYKGVWKARRIANADYFEDAQPYKMTPIGAIGLELWSMSDEIVFDNF 369
YKG+W PMI+NP Y+G+W ++I N DYFED P+ +T A+GLELWSM+ +I FDNF
Sbjct: 368 YKGIWRPPMINNPNYQGLWSPQKIPNPDYFEDDHPFLLTSFSALGLELWSMTPDIYFDNF 427
Query: 370 IIVDNKKAADDFAAETWVVKKDAERRADPNSQSVVDAIREATSER 504
II K+ AD +A + W +K A+ N V+ + A ER
Sbjct: 428 IICSEKEVADQWATDGWELKIMV---ANANEPGVLRQLVIAAEER 469
>sp|Q38798|CALX2_ARATH Calnexin homolog 2 precursor
Length = 532
Score = 183 bits (464), Expect = 6e-46
Identities = 79/163 (48%), Positives = 112/163 (68%), Gaps = 3/163 (1%)
Frame = +1
Query: 7 EEPDGWLENEPLTVPDEKSEKPKDWVDEMDGEWEAPRIDNPLCKDAPGCGPWKSPKIKNP 186
E+P+GWL++EP+ V D ++ KP+DW DE DGEWEAP++ N C+ APGCG WK P +NP
Sbjct: 267 EKPEGWLDDEPVEVEDPEASKPEDWDDEEDGEWEAPKVSNTKCEAAPGCGEWKRPMKRNP 326
Query: 187 NYKGVWTAPMIDNPKYKGVWKARRIANADYFEDAQPYKMTPIGAIGLELWSMSDEIVFDN 366
YKG W++P+IDNP YKG+WK R I N DYFE +P + PI AIG+E+W+M D I+FDN
Sbjct: 327 AYKGKWSSPLIDNPAYKGIWKPRDIPNPDYFELERP-NLEPIAAIGIEIWTMQDGILFDN 385
Query: 367 FIIVDNKKAADDFAAETWVVKKDAER---RADPNSQSVVDAIR 486
+I ++K A+ + TW K D E+ +A+ + D ++
Sbjct: 386 ILISKDEKVAETYRQSTWKPKFDVEKEKQKAEDEAAGEADGLK 428
>sp|P29402|CALX1_ARATH Calnexin homolog 1 precursor
Length = 530
Score = 182 bits (463), Expect = 7e-46
Identities = 81/163 (49%), Positives = 111/163 (68%), Gaps = 3/163 (1%)
Frame = +1
Query: 7 EEPDGWLENEPLTVPDEKSEKPKDWVDEMDGEWEAPRIDNPLCKDAPGCGPWKSPKIKNP 186
E+P+GWL++EP V D ++ KP+DW DE DG WEAP+IDNP C+ APGCG WK P +NP
Sbjct: 265 EKPEGWLDDEPEEVDDPEATKPEDWDDEEDGMWEAPKIDNPKCEAAPGCGEWKRPMKRNP 324
Query: 187 NYKGVWTAPMIDNPKYKGVWKARRIANADYFEDAQPYKMTPIGAIGLELWSMSDEIVFDN 366
YKG W++P+IDNP YKG+WK R I N DYFE +P PI AIG+E+W+M D I+FDN
Sbjct: 325 AYKGKWSSPLIDNPAYKGIWKPRDIPNPDYFELDRP-DYEPIAAIGIEIWTMQDGILFDN 383
Query: 367 FIIVDNKKAADDFAAETWVVKKDAER---RADPNSQSVVDAIR 486
+I ++K A+ + TW K D E+ +A+ + D ++
Sbjct: 384 ILIAKDEKVAETYRQTTWKPKFDVEKEKQKAEEEAAGSADGLK 426
>sp|Q39817|CALX_SOYBN Calnexin homolog precursor
Length = 546
Score = 182 bits (463), Expect = 7e-46
Identities = 78/146 (53%), Positives = 104/146 (71%)
Frame = +1
Query: 7 EEPDGWLENEPLTVPDEKSEKPKDWVDEMDGEWEAPRIDNPLCKDAPGCGPWKSPKIKNP 186
E+P+GWL++EP + D ++ KP+DW DE DGEWEAP+I+NP C+ APGCG WK P +NP
Sbjct: 274 EKPEGWLDDEPEEIDDPEATKPEDWDDEEDGEWEAPKIENPKCEAAPGCGEWKRPTKRNP 333
Query: 187 NYKGVWTAPMIDNPKYKGVWKARRIANADYFEDAQPYKMTPIGAIGLELWSMSDEIVFDN 366
YKG W+AP IDNP YKG+WK R I N +YFE A+P PI AIG+E+W+M D I+FDN
Sbjct: 334 AYKGKWSAPYIDNPSYKGIWKpreIPNPEYFELAKP-DFEPIAAIGIEIWTMQDGILFDN 392
Query: 367 FIIVDNKKAADDFAAETWVVKKDAER 444
+I ++ K A+ + TW K E+
Sbjct: 393 VLIANDDKVAESYRETTWKPKFTVEK 418
>sp|O14967|CLGN_HUMAN Calmegin precursor
Length = 610
Score = 181 bits (459), Expect = 2e-45
Identities = 76/137 (55%), Positives = 98/137 (71%)
Frame = +1
Query: 10 EPDGWLENEPLTVPDEKSEKPKDWVDEMDGEWEAPRIDNPLCKDAPGCGPWKSPKIKNPN 189
+P GWL++EP +PD +EKP DW ++ DGEWEAP+I NP C+ GCG WK P I NP
Sbjct: 310 KPAGWLDDEPKFIPDPNAEKPDDWNEDTDGEWEAPQILNPACRI--GCGEWKPPMIDNPK 367
Query: 190 YKGVWTAPMIDNPKYKGVWKARRIANADYFEDAQPYKMTPIGAIGLELWSMSDEIVFDNF 369
YKGVW P++DNP Y+G+W R+I N DYFED P+ +T A+GLELWSM+ +I FDNF
Sbjct: 368 YKGVWRPPLVDNPNYQGIWSPRKIPNPDYFEDDHPFLLTSFSALGLELWSMTSDIYFDNF 427
Query: 370 IIVDNKKAADDFAAETW 420
II K+ AD +AA+ W
Sbjct: 428 IICSEKEVADHWAADGW 444
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.310 0.129 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,758,585
Number of Sequences: 369166
Number of extensions: 1955107
Number of successful extensions: 3938
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3730
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7715018400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)