Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_008_F06
(863 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 461 e-129
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 461 e-129
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 461 e-129
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 459 e-129
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 457 e-128
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 456 e-128
sp|Q9U639|HSP7D_MANSE Heat shock 70 kDa protein cognate 4 (... 451 e-127
sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70) 448 e-126
sp|P08107|HSP71_HUMAN Heat shock 70 kDa protein 1 (HSP70.1)... 447 e-125
sp|P09446|HSP7A_CAEEL Heat shock 70 kDa protein A 447 e-125
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 461 bits (1186), Expect = e-129
Identities = 240/287 (83%), Positives = 243/287 (84%)
Frame = +3
Query: 3 LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISD 182
LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI EFKRKHKKDIS+
Sbjct: 196 LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISE 255
Query: 183 NKRAVRRLRTACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLE 362
NKRAVRRLRTACERAKRTLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+
Sbjct: 256 NKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLD 315
Query: 363 PVEKALRDAKLDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXX 542
PVEKALRDAKLDK IHDIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE
Sbjct: 316 PVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAV 375
Query: 543 XXXILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQ 722
ILSGDKSE VQD GIETAGGVMT LIKRN YSDNQ
Sbjct: 376 QAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQ 435
Query: 723 PGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDA 863
PGVLIQVYEGERAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDA
Sbjct: 436 PGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDA 482
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 461 bits (1186), Expect = e-129
Identities = 240/287 (83%), Positives = 243/287 (84%)
Frame = +3
Query: 3 LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISD 182
LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI EFKRKHKKDIS+
Sbjct: 196 LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISE 255
Query: 183 NKRAVRRLRTACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLE 362
NKRAVRRLRTACERAKRTLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+
Sbjct: 256 NKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLD 315
Query: 363 PVEKALRDAKLDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXX 542
PVEKALRDAKLDK IHDIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE
Sbjct: 316 PVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAV 375
Query: 543 XXXILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQ 722
ILSGDKSE VQD GIETAGGVMT LIKRN YSDNQ
Sbjct: 376 QAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQ 435
Query: 723 PGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDA 863
PGVLIQVYEGERAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDA
Sbjct: 436 PGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDA 482
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 461 bits (1186), Expect = e-129
Identities = 240/287 (83%), Positives = 243/287 (84%)
Frame = +3
Query: 3 LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISD 182
LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI EFKRKHKKDIS+
Sbjct: 196 LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISE 255
Query: 183 NKRAVRRLRTACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLE 362
NKRAVRRLRTACERAKRTLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+
Sbjct: 256 NKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLD 315
Query: 363 PVEKALRDAKLDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXX 542
PVEKALRDAKLDK IHDIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE
Sbjct: 316 PVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAV 375
Query: 543 XXXILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQ 722
ILSGDKSE VQD GIETAGGVMT LIKRN YSDNQ
Sbjct: 376 QAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQ 435
Query: 723 PGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDA 863
PGVLIQVYEGERAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDA
Sbjct: 436 PGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDA 482
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 459 bits (1182), Expect = e-129
Identities = 239/287 (83%), Positives = 243/287 (84%)
Frame = +3
Query: 3 LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISD 182
LIFDLGGG+FDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI EFKRKHKKDISD
Sbjct: 196 LIFDLGGGSFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFITEFKRKHKKDISD 255
Query: 183 NKRAVRRLRTACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLE 362
NKRAVRRLRTACERAKRTLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+
Sbjct: 256 NKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLD 315
Query: 363 PVEKALRDAKLDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXX 542
PVEKALRDAK+DK IHDIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE
Sbjct: 316 PVEKALRDAKMDKAQIHDIVLVGGSTRIPKIQKLLQDYFNGKELNKSINPDEAVAYGAAV 375
Query: 543 XXXILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQ 722
ILSGDKSE VQD GIETAGGVMT LIKRN YSDNQ
Sbjct: 376 QAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQ 435
Query: 723 PGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDA 863
PGVLIQVYEGERAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDA
Sbjct: 436 PGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDA 482
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 457 bits (1177), Expect = e-128
Identities = 237/287 (82%), Positives = 243/287 (84%)
Frame = +3
Query: 3 LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISD 182
LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI EFKRK+KKDISD
Sbjct: 196 LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKYKKDISD 255
Query: 183 NKRAVRRLRTACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLE 362
NKRAVRRLRTACERAKRTLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+
Sbjct: 256 NKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLD 315
Query: 363 PVEKALRDAKLDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXX 542
PVEK+LRDAK+DK +HDIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE
Sbjct: 316 PVEKSLRDAKMDKAQVHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAV 375
Query: 543 XXXILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQ 722
ILSGDKSE VQD GIETAGGVMT LIKRN YSDNQ
Sbjct: 376 QAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQ 435
Query: 723 PGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDA 863
PGVLIQVYEGERAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDA
Sbjct: 436 PGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDA 482
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 456 bits (1172), Expect = e-128
Identities = 238/287 (82%), Positives = 241/287 (83%)
Frame = +3
Query: 3 LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISD 182
LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI EFKR KKDIS+
Sbjct: 196 LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRNDKKDISE 255
Query: 183 NKRAVRRLRTACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLE 362
NKRAVRRLRTACERAKRTLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+
Sbjct: 256 NKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLD 315
Query: 363 PVEKALRDAKLDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXX 542
PVEKALRDAKLDK IHDIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE
Sbjct: 316 PVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAV 375
Query: 543 XXXILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQ 722
ILSGDKSE VQD GIETAGGVMT LIKRN YSDNQ
Sbjct: 376 QAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQ 435
Query: 723 PGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDA 863
PGVLIQVYEGERAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDA
Sbjct: 436 PGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDA 482
>sp|Q9U639|HSP7D_MANSE Heat shock 70 kDa protein cognate 4 (Hsc 70-4)
Length = 652
Score = 451 bits (1161), Expect = e-127
Identities = 231/287 (80%), Positives = 243/287 (84%)
Frame = +3
Query: 3 LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISD 182
LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF+QEFKRK+KKD++
Sbjct: 196 LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTT 255
Query: 183 NKRAVRRLRTACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLE 362
NKRA+RRLRTACERAKRTLSSS QA+IEIDSL+EGIDFYTSITRARFEELNADLFRST+E
Sbjct: 256 NKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTME 315
Query: 363 PVEKALRDAKLDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXX 542
PVEK+LRDAK+DK IHDIVLVGGSTRIPK+QKLLQD FNGKELNKSINPDE
Sbjct: 316 PVEKSLRDAKMDKSQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAV 375
Query: 543 XXXILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQ 722
IL GDKSE VQD GIETAGGVMT LIKRN YSDNQ
Sbjct: 376 QAAILHGDKSEEVQDLLLLDVTPLSLGIETAGGVMTTLIKRNTTIPTKQTQTFTTYSDNQ 435
Query: 723 PGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDA 863
PGVLIQV+EGERAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDA
Sbjct: 436 PGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDA 482
>sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70)
Length = 644
Score = 448 bits (1153), Expect = e-126
Identities = 228/287 (79%), Positives = 245/287 (85%)
Frame = +3
Query: 3 LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISD 182
LIFDLGGGTFDVSILTIEDGIFEVK+TAGDTHLGGEDFDNR+V+HF++EFKRKHKKDIS
Sbjct: 198 LIFDLGGGTFDVSILTIEDGIFEVKATAGDTHLGGEDFDNRLVSHFVEEFKRKHKKDISQ 257
Query: 183 NKRAVRRLRTACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLE 362
NKRA+RRLRTACERAKRTLSSS+QA+IEIDSL+EGIDFYTSITRARFEE+ +DLFR TLE
Sbjct: 258 NKRALRRLRTACERAKRTLSSSSQASIEIDSLFEGIDFYTSITRARFEEMCSDLFRGTLE 317
Query: 363 PVEKALRDAKLDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXX 542
PVEKALRDAK+DK IHD+VLVGGSTRIPK+QKLLQD FNG+ELNKSINPDE
Sbjct: 318 PVEKALRDAKMDKAQIHDVVLVGGSTRIPKVQKLLQDFFNGRELNKSINPDEAVAYGAAI 377
Query: 543 XXXILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQ 722
ILSGDKSE VQD GIETAGGVMTALIKRN YSDNQ
Sbjct: 378 QAAILSGDKSENVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPSKQTQTFTTYSDNQ 437
Query: 723 PGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDA 863
PGV+IQVYEGERAMTKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDA
Sbjct: 438 PGVMIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDA 484
>sp|P08107|HSP71_HUMAN Heat shock 70 kDa protein 1 (HSP70.1) (HSP70-1/HSP70-2)
Length = 641
Score = 447 bits (1151), Expect = e-125
Identities = 228/287 (79%), Positives = 244/287 (85%)
Frame = +3
Query: 3 LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISD 182
LIFDLGGGTFDVSILTI+DGIFEVK+TAGDTHLGGEDFDNR+VNHF++EFKRKHKKDIS
Sbjct: 196 LIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQ 255
Query: 183 NKRAVRRLRTACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLE 362
NKRAVRRLRTACERAKRTLSSS QA++EIDSL+EGIDFYTSITRARFEEL +DLFRSTLE
Sbjct: 256 NKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLE 315
Query: 363 PVEKALRDAKLDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXX 542
PVEKALRDAKLDK IHD+VLVGGSTRIPK+QKLLQD FNG++LNKSINPDE
Sbjct: 316 PVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAV 375
Query: 543 XXXILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQ 722
IL GDKSE VQD G+ETAGGVMTALIKRN YSDNQ
Sbjct: 376 QAAILMGDKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQ 435
Query: 723 PGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDA 863
PGVLIQVYEGERAMTKDNNLLG+FEL+GIPPAPRGVPQIEVTFDIDA
Sbjct: 436 PGVLIQVYEGERAMTKDNNLLGRFELSGIPPAPRGVPQIEVTFDIDA 482
>sp|P09446|HSP7A_CAEEL Heat shock 70 kDa protein A
Length = 640
Score = 447 bits (1150), Expect = e-125
Identities = 229/287 (79%), Positives = 244/287 (85%)
Frame = +3
Query: 3 LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISD 182
LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF EFKRKHKKD++
Sbjct: 197 LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFCAEFKRKHKKDLAS 256
Query: 183 NKRAVRRLRTACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLE 362
N RA+RRLRTACERAKRTLSSS+QA+IEIDSL+EGIDFYT+ITRARFEEL ADLFRST++
Sbjct: 257 NPRALRRLRTACERAKRTLSSSSQASIEIDSLFEGIDFYTNITRARFEELCADLFRSTMD 316
Query: 363 PVEKALRDAKLDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXX 542
PVEK+LRDAK+DK +HDIVLVGGSTRIPK+QKLL DLF+GKELNKSINPDE
Sbjct: 317 PVEKSLRDAKMDKSQVHDIVLVGGSTRIPKVQKLLSDLFSGKELNKSINPDEAVAYGAAV 376
Query: 543 XXXILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQ 722
ILSGDKSEAVQD GIETAGGVMTALIKRN YSDNQ
Sbjct: 377 QAAILSGDKSEAVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPTKTAQTFTTYSDNQ 436
Query: 723 PGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDA 863
PGVLIQVYEGERAMTKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDA
Sbjct: 437 PGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDA 483
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,974,649
Number of Sequences: 369166
Number of extensions: 1514632
Number of successful extensions: 5396
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4513
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8582957970
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)