Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_008_D13
(383 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 86 2e-17
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 82 4e-16
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 80 1e-15
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 80 1e-15
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 80 1e-15
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 80 1e-15
sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein 80 1e-15
sp|Q9W6Y1|HSP7C_ORYLA Heat shock cognate 71 kDa protein (Hs... 77 9e-15
sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (... 76 3e-14
sp|P14659|HSP72_RAT Heat shock-related 70 kDa protein 2 (He... 76 3e-14
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 86.3 bits (212), Expect = 2e-17
Identities = 37/43 (86%), Positives = 41/43 (95%)
Frame = +3
Query: 3 IIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQ 131
I++KC+EVIGWLD NQTAEKEEYEHHQKELEKVCNPI+TK YQ
Sbjct: 570 ILEKCNEVIGWLDKNQTAEKEEYEHHQKELEKVCNPIITKLYQ 612
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 82.0 bits (201), Expect = 4e-16
Identities = 35/43 (81%), Positives = 40/43 (93%)
Frame = +3
Query: 3 IIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQ 131
I+DKC+EVIGWLD NQTAE+EE+EH QKELEKVCNPI+TK YQ
Sbjct: 570 ILDKCNEVIGWLDKNQTAEREEFEHQQKELEKVCNPIITKLYQ 612
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 80.5 bits (197), Expect = 1e-15
Identities = 34/43 (79%), Positives = 39/43 (90%)
Frame = +3
Query: 3 IIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQ 131
I+DKC+E+I WLD NQTAEKEE+EH QKELEKVCNPI+TK YQ
Sbjct: 570 ILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 80.5 bits (197), Expect = 1e-15
Identities = 34/43 (79%), Positives = 39/43 (90%)
Frame = +3
Query: 3 IIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQ 131
I+DKC+E+I WLD NQTAEKEE+EH QKELEKVCNPI+TK YQ
Sbjct: 570 ILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 80.5 bits (197), Expect = 1e-15
Identities = 34/43 (79%), Positives = 39/43 (90%)
Frame = +3
Query: 3 IIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQ 131
I+DKC+E+I WLD NQTAEKEE+EH QKELEKVCNPI+TK YQ
Sbjct: 570 ILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 80.5 bits (197), Expect = 1e-15
Identities = 34/43 (79%), Positives = 39/43 (90%)
Frame = +3
Query: 3 IIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQ 131
I+DKC+E+I WLD NQTAEKEE+EH QKELEKVCNPI+TK YQ
Sbjct: 570 ILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612
>sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein
Length = 649
Score = 80.1 bits (196), Expect = 1e-15
Identities = 34/43 (79%), Positives = 39/43 (90%)
Frame = +3
Query: 3 IIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQ 131
I+DKC+EVI WLD NQTAEK+EYEH QK+LEKVCNPI+TK YQ
Sbjct: 570 ILDKCNEVISWLDKNQTAEKDEYEHQQKDLEKVCNPIITKLYQ 612
>sp|Q9W6Y1|HSP7C_ORYLA Heat shock cognate 71 kDa protein (Hsc70.1)
Length = 686
Score = 77.4 bits (189), Expect = 9e-15
Identities = 33/43 (76%), Positives = 38/43 (88%)
Frame = +3
Query: 3 IIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQ 131
I+DKC+EVI WLD NQTAE++EY H QKELEKVCNPI+TK YQ
Sbjct: 568 ILDKCNEVISWLDKNQTAERDEYVHQQKELEKVCNPIITKLYQ 610
>sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (Heat shock 70 kDa protein 2)
Length = 639
Score = 75.9 bits (185), Expect = 3e-14
Identities = 32/43 (74%), Positives = 37/43 (86%)
Frame = +3
Query: 3 IIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQ 131
I+DKC EVI WLD NQ AEK+EYEH QKELE+VCNPI++K YQ
Sbjct: 573 ILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ 615
>sp|P14659|HSP72_RAT Heat shock-related 70 kDa protein 2 (Heat shock protein 70.2)
(Testis-specific heat shock protein-related) (HST)
Length = 633
Score = 75.9 bits (185), Expect = 3e-14
Identities = 32/43 (74%), Positives = 37/43 (86%)
Frame = +3
Query: 3 IIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQ 131
I+DKC EVI WLD NQ AEK+EYEH QKELE+VCNPI++K YQ
Sbjct: 573 ILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ 615
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,566,903
Number of Sequences: 369166
Number of extensions: 627882
Number of successful extensions: 1972
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1972
length of database: 68,354,980
effective HSP length: 94
effective length of database: 50,989,890
effective search space used: 1682666370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)