Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_008_D10
(724 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q5ZMW3|API5_CHICK Apoptosis inhibitor 5 (API-5) 65 2e-10
sp|O35841|API5_MOUSE Apoptosis inhibitor 5 (API-5) (AAC-11) 64 4e-10
sp|Q5R644|API5_PONPY Apoptosis inhibitor 5 (API-5) 64 5e-10
sp|Q9BZZ5|API5_HUMAN Apoptosis inhibitor 5 (API-5) (Fibrobl... 64 5e-10
sp|P36667|WBBL_ECOLI Putative lipopolysaccharide biosynthes... 33 0.77
sp|Q86Y56|HRJ97_HUMAN Heat repeats-containing protein FLJ20397 33 1.0
sp|Q8S4P5|EZ2_MAIZE Polycomb protein EZ2 (Enhancer of zeste... 31 2.9
sp|Q60779|GAS8_MOUSE Growth-arrest-specific protein 8 (Grow... 30 6.5
sp|O94288|NOC3_SCHPO Nucleolar complex-associated protein 3 30 8.5
sp|Q43255|C71C2_MAIZE Cytochrome P450 71C2 (Benzoxazineless 3) 30 8.5
>sp|Q5ZMW3|API5_CHICK Apoptosis inhibitor 5 (API-5)
Length = 523
Score = 65.1 bits (157), Expect = 2e-10
Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 2/162 (1%)
Frame = +3
Query: 141 INNVFQLTYEQLPAVAEEVTPEILATYSDDTKKLKELECFLLATYNLCKFRPEAMG--LN 314
+ +F E +P EE A + + +EC L + + L + P+ + LN
Sbjct: 307 LKKLFDKLLEYMPLPPEEAENGENAGGEEPKLQFSYVECLLYSFHQLGRKLPDFLTAKLN 366
Query: 315 DETLKQFKLRLQFLGRYNQIANKKATDAVAKLPKNDQGLGENRDQQLLVKVTANLQILIR 494
E LK FK+RLQ+ R Q+ ++ A+ EN+ + + +K+T N+ +LI+
Sbjct: 367 AEKLKDFKIRLQYFARGLQVYIRQLRLALQGKTGEALKTEENKIKVVALKITNNINVLIK 426
Query: 495 ELFKAVPTFKTPIAPSWSVPVETAVSATKRLSTNNDNPSSQK 620
+LF P++K+ + SW PV+ A + KR S + + S K
Sbjct: 427 DLFHIPPSYKSTVTLSWK-PVQKADANQKRTSEDTTSSSPPK 467
>sp|O35841|API5_MOUSE Apoptosis inhibitor 5 (API-5) (AAC-11)
Length = 504
Score = 63.9 bits (154), Expect = 4e-10
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 2/162 (1%)
Frame = +3
Query: 141 INNVFQLTYEQLPAVAEEVTPEILATYSDDTKKLKELECFLLATYNLCKFRPEAMG--LN 314
+ +F E +P EE A + + +EC L + + L + P+ + LN
Sbjct: 307 LRKLFDKLLEYMPLPPEEAENGENAGNEEPKLQFSYVECLLYSFHQLGRKLPDFLTAKLN 366
Query: 315 DETLKQFKLRLQFLGRYNQIANKKATDAVAKLPKNDQGLGENRDQQLLVKVTANLQILIR 494
E LK FK+RLQ+ R Q+ ++ A+ EN+ + + +K+T N+ +LI+
Sbjct: 367 AEKLKDFKIRLQYFARGLQVYIRQLRLALQGKTGEALKTEENKIKVVALKITNNINVLIK 426
Query: 495 ELFKAVPTFKTPIAPSWSVPVETAVSATKRLSTNNDNPSSQK 620
+LF P++K+ + SW PV+ KR S + + S K
Sbjct: 427 DLFHIPPSYKSTVTLSWK-PVQKVEIGQKRTSEDTSSGSPPK 467
>sp|Q5R644|API5_PONPY Apoptosis inhibitor 5 (API-5)
Length = 504
Score = 63.5 bits (153), Expect = 5e-10
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 2/162 (1%)
Frame = +3
Query: 141 INNVFQLTYEQLPAVAEEVTPEILATYSDDTKKLKELECFLLATYNLCKFRPEAMG--LN 314
+ +F E +P EE A + + +EC L + + L + P+ + LN
Sbjct: 307 LRKLFDKLLEYMPLPPEEAENGENAGNEEPKLQFSYVECLLYSFHQLGRKLPDFLTAKLN 366
Query: 315 DETLKQFKLRLQFLGRYNQIANKKATDAVAKLPKNDQGLGENRDQQLLVKVTANLQILIR 494
E LK FK+RLQ+ R Q+ ++ A+ EN+ + + +K+T N+ +LI+
Sbjct: 367 AEKLKDFKIRLQYFARGLQVYIRQLRLALQGKTGEALKTEENKIKVVALKITNNINVLIK 426
Query: 495 ELFKAVPTFKTPIAPSWSVPVETAVSATKRLSTNNDNPSSQK 620
+LF P++K+ + SW PV+ KR S + + S K
Sbjct: 427 DLFHIPPSYKSTVTLSWK-PVQKVEIGQKRASEDTTSGSPPK 467
>sp|Q9BZZ5|API5_HUMAN Apoptosis inhibitor 5 (API-5) (Fibroblast growth factor
2-interacting factor) (FIF) (XAGL protein) (AAC-11)
Length = 510
Score = 63.5 bits (153), Expect = 5e-10
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 2/162 (1%)
Frame = +3
Query: 141 INNVFQLTYEQLPAVAEEVTPEILATYSDDTKKLKELECFLLATYNLCKFRPEAMG--LN 314
+ +F E +P EE A + + +EC L + + L + P+ + LN
Sbjct: 307 LRKLFDKLLEYMPLPPEEAENGENAGNEEPKLQFSYVECLLYSFHQLGRKLPDFLTAKLN 366
Query: 315 DETLKQFKLRLQFLGRYNQIANKKATDAVAKLPKNDQGLGENRDQQLLVKVTANLQILIR 494
E LK FK+RLQ+ R Q+ ++ A+ EN+ + + +K+T N+ +LI+
Sbjct: 367 AEKLKDFKIRLQYFARGLQVYIRQLRLALQGKTGEALKTEENKIKVVALKITNNINVLIK 426
Query: 495 ELFKAVPTFKTPIAPSWSVPVETAVSATKRLSTNNDNPSSQK 620
+LF P++K+ + SW PV+ KR S + + S K
Sbjct: 427 DLFHIPPSYKSTVTLSWK-PVQKVEIGQKRASEDTTSGSPPK 467
>sp|P36667|WBBL_ECOLI Putative lipopolysaccharide biosynthesis glycosyl transferase wbbL
Length = 264
Score = 33.1 bits (74), Expect = 0.77
Identities = 21/74 (28%), Positives = 36/74 (48%)
Frame = +3
Query: 195 VTPEILATYSDDTKKLKELECFLLATYNLCKFRPEAMGLNDETLKQFKLRLQFLGRYNQI 374
+ P+I+ + D +K +E A LC FR EA L+D ++++F + F+ +
Sbjct: 88 LNPDIIMKHDDLLTYIKYVESKRYAFSTLCLFRDEAKSLHDYSVRKFPVLSDFIVSFMLG 147
Query: 375 ANKKATDAVAKLPK 416
NK K+PK
Sbjct: 148 INK------TKIPK 155
>sp|Q86Y56|HRJ97_HUMAN Heat repeats-containing protein FLJ20397
Length = 855
Score = 32.7 bits (73), Expect = 1.0
Identities = 22/84 (26%), Positives = 41/84 (48%)
Frame = +3
Query: 159 LTYEQLPAVAEEVTPEILATYSDDTKKLKELECFLLATYNLCKFRPEAMGLNDETLKQFK 338
L+ EQ+ V E + P++L T +D+K + + C ++ T F + G+ D K K
Sbjct: 690 LSAEQIRDVQETLMPQVLTTLEEDSKMTRLISCRIINT-----FLKTSGGMTDPE-KLIK 743
Query: 339 LRLQFLGRYNQIANKKATDAVAKL 410
+ + L R + ++N A + L
Sbjct: 744 IYPELLKRLDDVSNDVRMAAASTL 767
>sp|Q8S4P5|EZ2_MAIZE Polycomb protein EZ2 (Enhancer of zeste protein 2)
Length = 894
Score = 31.2 bits (69), Expect = 2.9
Identities = 14/42 (33%), Positives = 28/42 (66%)
Frame = +3
Query: 375 ANKKATDAVAKLPKNDQGLGENRDQQLLVKVTANLQILIREL 500
++ KA+D+ + ++DQG+G++ +V + ANL LIR++
Sbjct: 3 SSSKASDSSQRSKRSDQGMGKDAAAASVVPIHANLTQLIRQV 44
>sp|Q60779|GAS8_MOUSE Growth-arrest-specific protein 8 (Growth arrest-specific 11)
Length = 478
Score = 30.0 bits (66), Expect = 6.5
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 9/151 (5%)
Frame = +3
Query: 75 LNTDTNAQVSKLNFKDDEGLKCINNVFQLTYE-QLPAVAEEVTPEILA-------TYSDD 230
+ D QV ++ K D+ +K + + L + ++ V E +I ++D
Sbjct: 174 MRNDFERQVREIEAKYDKKMKMLRDELDLRRKTEIHEVEERKNGQISTLMQRHEEAFTDI 233
Query: 231 TKKLKELECFLLATYNLCKFRPEAMGLNDETLKQFKLRLQFLGRYNQIANKKATDAVAKL 410
++ LA N K + E M +E +++ + R +KA D + ++
Sbjct: 234 KNYYNDITLNNLALINSLKEQMEDMRKKEEHMEREMAEVTLQNRRLADPLQKAKDEMNEM 293
Query: 411 PKNDQGLGEN-RDQQLLVKVTANLQILIREL 500
K LG + RD+Q+LV A L++ REL
Sbjct: 294 QKR---LGNHERDKQILVCTKARLKVAEREL 321
>sp|O94288|NOC3_SCHPO Nucleolar complex-associated protein 3
Length = 747
Score = 29.6 bits (65), Expect = 8.5
Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 5/150 (3%)
Frame = +3
Query: 27 NLYDLLRCLVELTNRSLNTDTNAQVSKLNFKD-DEGLKCINNVFQLTYEQLPAVAEEVTP 203
++YDL V + N D Q NFK + L + + Y++ + +E+
Sbjct: 414 DVYDLFLS-VNILNDMKIKDEAWQDDTTNFKKRKKDLPYLTKKARKNYKETKKITQEMKE 472
Query: 204 -EILATYSDDTKKLKELECFLLATY-NLCKFRPEAMGLNDETLKQFK--LRLQFLGRYNQ 371
+ + T D K E+ + TY + + + +G E + + L ++FLG Q
Sbjct: 473 ADAVITAQDKEKYQSEILKIIFITYFKTLQLKGKLIGNALEGVARLSHLLNIEFLGDLLQ 532
Query: 372 IANKKATDAVAKLPKNDQGLGENRDQQLLV 461
+ + D LPK+ G+ R+ L V
Sbjct: 533 VLRELVMDDTVFLPKDKSGVQATREALLTV 562
>sp|Q43255|C71C2_MAIZE Cytochrome P450 71C2 (Benzoxazineless 3)
Length = 536
Score = 29.6 bits (65), Expect = 8.5
Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Frame = +3
Query: 237 KLKELECFLLATYNLCKFRPEAMGLNDETLKQFKLRLQFLG-RYNQIANKKATDAVAKLP 413
+L E+ LLA +NL + P M + D L+ ++ + L R+N + ++ + V P
Sbjct: 234 ELTEINVSLLAGFNLEDYFPPNMAMADVLLRLVSVKARRLNQRWNDVFDELIQEHVQSRP 293
Query: 414 KNDQGLGENRDQQLLVKV-------TANLQILIRELFKA 509
+ E +L+ + T NL+ ++ ++F+A
Sbjct: 294 SGESEESEADFIHVLLSIQQEYGLTTDNLKAILVDMFEA 332
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,784,110
Number of Sequences: 369166
Number of extensions: 1561692
Number of successful extensions: 4124
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4120
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 6462248555
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)