Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_008_B15
(576 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q90705|EF2_CHICK Elongation factor 2 (EF-2) 287 2e-77
sp|P58252|EF2_MOUSE Elongation factor 2 (EF-2) 286 2e-77
sp|P13639|EF2_HUMAN Elongation factor 2 (EF-2) 286 2e-77
sp|P05086|EF2_MESAU Elongation factor 2 (EF-2) 286 2e-77
sp|P05197|EF2_RAT Elongation factor 2 (EF-2) 286 2e-77
sp|P29691|EF2_CAEEL Elongation factor 2 (EF-2) 283 2e-76
sp|P09445|EF2_CRIGR Elongation factor 2 (EF-2) 280 2e-75
sp|P13060|EF2_DROME Elongation factor 2 (EF-2) 279 3e-75
sp|O23755|EF2_BETVU Elongation factor 2 (EF-2) 242 4e-64
sp|O14460|EF2_SCHPO Elongation factor 2 (EF-2) 242 6e-64
>sp|Q90705|EF2_CHICK Elongation factor 2 (EF-2)
Length = 858
Score = 287 bits (734), Expect = 2e-77
Identities = 133/182 (73%), Positives = 151/182 (82%)
Frame = +1
Query: 1 DSVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTA 180
DSVVA F WATK+GVLCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC YA VLTA
Sbjct: 677 DSVVAGFQWATKEGVLCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYACVLTA 736
Query: 181 SPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNF 360
P L+EP+Y EIQ PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF F
Sbjct: 737 QPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGF 796
Query: 361 TSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLD 540
T++LR+ TGGQAFPQCVFDHWQ+ PG+P D S+P V +TRKRKGL E +P LD FLD
Sbjct: 797 TADLRSNTGGQAFPQCVFDHWQILPGDPFDSASRPSQVVAETRKRKGLKEGIPALDNFLD 856
Query: 541 KL 546
KL
Sbjct: 857 KL 858
>sp|P58252|EF2_MOUSE Elongation factor 2 (EF-2)
Length = 858
Score = 286 bits (733), Expect = 2e-77
Identities = 133/182 (73%), Positives = 151/182 (82%)
Frame = +1
Query: 1 DSVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTA 180
DSVVA F WATK+G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC YASVLTA
Sbjct: 677 DSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTA 736
Query: 181 SPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNF 360
P L+EP+Y EIQ PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF F
Sbjct: 737 QPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGF 796
Query: 361 TSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLD 540
T++LR+ TGGQAFPQCVFDHWQ+ PG+P D S+P V +TRKRKGL E +P LD FLD
Sbjct: 797 TADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLD 856
Query: 541 KL 546
KL
Sbjct: 857 KL 858
>sp|P13639|EF2_HUMAN Elongation factor 2 (EF-2)
Length = 858
Score = 286 bits (733), Expect = 2e-77
Identities = 133/182 (73%), Positives = 151/182 (82%)
Frame = +1
Query: 1 DSVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTA 180
DSVVA F WATK+G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC YASVLTA
Sbjct: 677 DSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTA 736
Query: 181 SPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNF 360
P L+EP+Y EIQ PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF F
Sbjct: 737 QPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGF 796
Query: 361 TSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLD 540
T++LR+ TGGQAFPQCVFDHWQ+ PG+P D S+P V +TRKRKGL E +P LD FLD
Sbjct: 797 TADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLD 856
Query: 541 KL 546
KL
Sbjct: 857 KL 858
>sp|P05086|EF2_MESAU Elongation factor 2 (EF-2)
Length = 858
Score = 286 bits (733), Expect = 2e-77
Identities = 133/182 (73%), Positives = 151/182 (82%)
Frame = +1
Query: 1 DSVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTA 180
DSVVA F WATK+G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC YASVLTA
Sbjct: 677 DSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTA 736
Query: 181 SPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNF 360
P L+EP+Y EIQ PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF F
Sbjct: 737 QPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGF 796
Query: 361 TSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLD 540
T++LR+ TGGQAFPQCVFDHWQ+ PG+P D S+P V +TRKRKGL E +P LD FLD
Sbjct: 797 TADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLD 856
Query: 541 KL 546
KL
Sbjct: 857 KL 858
>sp|P05197|EF2_RAT Elongation factor 2 (EF-2)
Length = 858
Score = 286 bits (733), Expect = 2e-77
Identities = 133/182 (73%), Positives = 151/182 (82%)
Frame = +1
Query: 1 DSVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTA 180
DSVVA F WATK+G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC YASVLTA
Sbjct: 677 DSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTA 736
Query: 181 SPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNF 360
P L+EP+Y EIQ PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF F
Sbjct: 737 QPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGF 796
Query: 361 TSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLD 540
T++LR+ TGGQAFPQCVFDHWQ+ PG+P D S+P V +TRKRKGL E +P LD FLD
Sbjct: 797 TADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLD 856
Query: 541 KL 546
KL
Sbjct: 857 KL 858
>sp|P29691|EF2_CAEEL Elongation factor 2 (EF-2)
Length = 852
Score = 283 bits (725), Expect = 2e-76
Identities = 135/182 (74%), Positives = 152/182 (83%)
Frame = +1
Query: 1 DSVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTA 180
DSVVA F WAT++GVL +ENMRGVRFN+HDVTLHADAIHRGGGQIIPTARR FYASVLTA
Sbjct: 671 DSVVAGFQWATREGVLSDENMRGVRFNVHDVTLHADAIHRGGGQIIPTARRVFYASVLTA 730
Query: 181 SPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNF 360
P LLEPVY EIQ PE A+GGIY LN+RRG +F E QV GTP +VVKAYLPVNESF F
Sbjct: 731 EPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESFGF 790
Query: 361 TSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLD 540
T++LR+ TGGQAFPQCVFDHWQ+ PG+PL+ +KP V DTRKRKGL E VP LD +LD
Sbjct: 791 TADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVPALDNYLD 850
Query: 541 KL 546
K+
Sbjct: 851 KM 852
>sp|P09445|EF2_CRIGR Elongation factor 2 (EF-2)
Length = 858
Score = 280 bits (716), Expect = 2e-75
Identities = 131/182 (71%), Positives = 149/182 (81%)
Frame = +1
Query: 1 DSVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTA 180
DSVVA F WATK+G LCEENMRGVRF++HDVTLHADAIHR GGQIIPTARRC YASVLTA
Sbjct: 677 DSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRRGGQIIPTARRCLYASVLTA 736
Query: 181 SPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNF 360
P L+EP+Y EIQ PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF F
Sbjct: 737 QPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGF 796
Query: 361 TSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLD 540
T++LR+ TGGQAFPQCVFDHWQ+ PG+P D S+ V +TRKRKGL E +P LD FLD
Sbjct: 797 TADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRGSQVVAETRKRKGLKEGIPALDNFLD 856
Query: 541 KL 546
KL
Sbjct: 857 KL 858
>sp|P13060|EF2_DROME Elongation factor 2 (EF-2)
Length = 844
Score = 279 bits (714), Expect = 3e-75
Identities = 129/182 (70%), Positives = 152/182 (83%)
Frame = +1
Query: 1 DSVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTA 180
DSVVA F WA+K+G+L +EN+RGVRFNI+DVTLHADAIHRGGGQIIPT RRC YA+ +TA
Sbjct: 663 DSVVAGFQWASKEGILADENLRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAAAITA 722
Query: 181 SPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNF 360
P L+EPVY CEIQ PE A+GGIY LN+RRG +F E QV GTP +VVKAYLPVNESF F
Sbjct: 723 KPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGF 782
Query: 361 TSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLD 540
T++LR+ TGGQAFPQCVFDHWQ+ PG+P +P SKP V+DTRKRKGL E +P L ++LD
Sbjct: 783 TADLRSNTGGQAFPQCVFDHWQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLPDLSQYLD 842
Query: 541 KL 546
KL
Sbjct: 843 KL 844
>sp|O23755|EF2_BETVU Elongation factor 2 (EF-2)
Length = 843
Score = 242 bits (618), Expect = 4e-64
Identities = 120/182 (65%), Positives = 136/182 (74%)
Frame = +1
Query: 1 DSVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTA 180
DSVVA F WA+K+G L EENMRG+ F + DV LH DAIHRGGGQIIPTARR FYAS LTA
Sbjct: 662 DSVVAGFQWASKEGALAEENMRGICFEVCDVVLHTDAIHRGGGQIIPTARRVFYASQLTA 721
Query: 181 SPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNF 360
P LLEPVY EIQ PE ALGGIYS LN++RG +F EMQ GTP Y +KAYLPV ESF F
Sbjct: 722 KPRLLEPVYLVEIQAPENALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGF 781
Query: 361 TSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLD 540
+S LRA T GQAFPQCVFDHW++ P +PL+ S+ V RKRKGL E + L +F D
Sbjct: 782 SSTLRASTSGQAFPQCVFDHWEMMPSDPLEAGSQASTLVSVIRKRKGLKEQMTPLSEFED 841
Query: 541 KL 546
KL
Sbjct: 842 KL 843
>sp|O14460|EF2_SCHPO Elongation factor 2 (EF-2)
Length = 842
Score = 242 bits (617), Expect = 6e-64
Identities = 121/182 (66%), Positives = 137/182 (75%)
Frame = +1
Query: 1 DSVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTA 180
DSVVAAF WA+K+G + EEN+R RFNI DV LHADAIHRGGGQIIPTARR YAS L A
Sbjct: 661 DSVVAAFAWASKEGPMFEENLRSCRFNILDVVLHADAIHRGGGQIIPTARRVVYASTLLA 720
Query: 181 SPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNF 360
SP + EPV+ EIQ E A+GGIYS LNK+RG +FSE Q GTP Y +KAYLPVNESF F
Sbjct: 721 SPIIQEPVFLVEIQVSENAMGGIYSVLNKKRGHVFSEEQRVGTPLYNIKAYLPVNESFGF 780
Query: 361 TSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLD 540
T ELR T GQAFPQ VFDHW G+PLDP SKPG V + RKRKGL E+VP ++ D
Sbjct: 781 TGELRQATAGQAFPQLVFDHWSPMSGDPLDPTSKPGQIVCEARKRKGLKENVPDYTEYYD 840
Query: 541 KL 546
+L
Sbjct: 841 RL 842
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,996,062
Number of Sequences: 369166
Number of extensions: 1506374
Number of successful extensions: 3227
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3112
length of database: 68,354,980
effective HSP length: 104
effective length of database: 49,142,540
effective search space used: 4275400980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)