Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_008_B07
(847 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 325 1e-88
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 325 1e-88
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 325 1e-88
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 325 1e-88
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 322 6e-88
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 322 1e-87
sp|P09446|HSP7A_CAEEL Heat shock 70 kDa protein A 319 5e-87
sp|Q9U639|HSP7D_MANSE Heat shock 70 kDa protein cognate 4 (... 319 7e-87
sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70) 317 2e-86
sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein 317 3e-86
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 325 bits (832), Expect = 1e-88
Identities = 174/225 (77%), Positives = 176/225 (78%)
Frame = +1
Query: 4 TLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIH 183
TLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEKALRDAKLDK IH
Sbjct: 273 TLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIH 332
Query: 184 DIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXX 363
DIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 333 DIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLL 392
Query: 364 XXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKD 543
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKD
Sbjct: 393 LLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKD 452
Query: 544 NNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSRC*KGNWK 678
NNLLGKFEL GIPPAPRGVPQIEVTFDIDANGILNVS K K
Sbjct: 453 NNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGK 497
Score = 57.4 bits (137), Expect = 5e-08
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = +2
Query: 656 AVEKGTGKENKITITNDKGRLSKDDIERMV 745
AV+K TGKENKITITNDKGRLSK+DIERMV
Sbjct: 490 AVDKSTGKENKITITNDKGRLSKEDIERMV 519
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 325 bits (832), Expect = 1e-88
Identities = 174/225 (77%), Positives = 176/225 (78%)
Frame = +1
Query: 4 TLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIH 183
TLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEKALRDAKLDK IH
Sbjct: 273 TLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIH 332
Query: 184 DIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXX 363
DIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 333 DIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLL 392
Query: 364 XXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKD 543
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKD
Sbjct: 393 LLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKD 452
Query: 544 NNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSRC*KGNWK 678
NNLLGKFEL GIPPAPRGVPQIEVTFDIDANGILNVS K K
Sbjct: 453 NNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGK 497
Score = 57.4 bits (137), Expect = 5e-08
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = +2
Query: 656 AVEKGTGKENKITITNDKGRLSKDDIERMV 745
AV+K TGKENKITITNDKGRLSK+DIERMV
Sbjct: 490 AVDKSTGKENKITITNDKGRLSKEDIERMV 519
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 325 bits (832), Expect = 1e-88
Identities = 174/225 (77%), Positives = 176/225 (78%)
Frame = +1
Query: 4 TLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIH 183
TLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEKALRDAKLDK IH
Sbjct: 273 TLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIH 332
Query: 184 DIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXX 363
DIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 333 DIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLL 392
Query: 364 XXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKD 543
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKD
Sbjct: 393 LLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKD 452
Query: 544 NNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSRC*KGNWK 678
NNLLGKFEL GIPPAPRGVPQIEVTFDIDANGILNVS K K
Sbjct: 453 NNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGK 497
Score = 57.4 bits (137), Expect = 5e-08
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = +2
Query: 656 AVEKGTGKENKITITNDKGRLSKDDIERMV 745
AV+K TGKENKITITNDKGRLSK+DIERMV
Sbjct: 490 AVDKSTGKENKITITNDKGRLSKEDIERMV 519
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 325 bits (832), Expect = 1e-88
Identities = 174/225 (77%), Positives = 176/225 (78%)
Frame = +1
Query: 4 TLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIH 183
TLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEKALRDAKLDK IH
Sbjct: 273 TLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIH 332
Query: 184 DIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXX 363
DIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 333 DIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLL 392
Query: 364 XXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKD 543
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKD
Sbjct: 393 LLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKD 452
Query: 544 NNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSRC*KGNWK 678
NNLLGKFEL GIPPAPRGVPQIEVTFDIDANGILNVS K K
Sbjct: 453 NNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGK 497
Score = 57.4 bits (137), Expect = 5e-08
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = +2
Query: 656 AVEKGTGKENKITITNDKGRLSKDDIERMV 745
AV+K TGKENKITITNDKGRLSK+DIERMV
Sbjct: 490 AVDKSTGKENKITITNDKGRLSKEDIERMV 519
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 322 bits (826), Expect = 6e-88
Identities = 172/225 (76%), Positives = 176/225 (78%)
Frame = +1
Query: 4 TLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIH 183
TLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEKALRDAK+DK IH
Sbjct: 273 TLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKMDKAQIH 332
Query: 184 DIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXX 363
DIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 333 DIVLVGGSTRIPKIQKLLQDYFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLL 392
Query: 364 XXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKD 543
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKD
Sbjct: 393 LLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKD 452
Query: 544 NNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSRC*KGNWK 678
NNLLGKFEL GIPPAPRGVPQIEVTFDIDANGI+NVS K K
Sbjct: 453 NNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIMNVSAVDKSTGK 497
Score = 57.4 bits (137), Expect = 5e-08
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = +2
Query: 656 AVEKGTGKENKITITNDKGRLSKDDIERMV 745
AV+K TGKENKITITNDKGRLSK+DIERMV
Sbjct: 490 AVDKSTGKENKITITNDKGRLSKEDIERMV 519
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 322 bits (824), Expect = 1e-87
Identities = 170/225 (75%), Positives = 176/225 (78%)
Frame = +1
Query: 4 TLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIH 183
TLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEK+LRDAK+DK +H
Sbjct: 273 TLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKSLRDAKMDKAQVH 332
Query: 184 DIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXX 363
DIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 333 DIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLL 392
Query: 364 XXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKD 543
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKD
Sbjct: 393 LLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKD 452
Query: 544 NNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSRC*KGNWK 678
NNLLGKFEL GIPPAPRGVPQIEVTFDIDANGI+NVS K K
Sbjct: 453 NNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIMNVSAADKSTGK 497
Score = 55.8 bits (133), Expect = 1e-07
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2
Query: 656 AVEKGTGKENKITITNDKGRLSKDDIERMV 745
A +K TGKENKITITNDKGRLSK+DIERMV
Sbjct: 490 AADKSTGKENKITITNDKGRLSKEDIERMV 519
>sp|P09446|HSP7A_CAEEL Heat shock 70 kDa protein A
Length = 640
Score = 319 bits (818), Expect = 5e-87
Identities = 168/226 (74%), Positives = 181/226 (80%)
Frame = +1
Query: 4 TLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIH 183
TLSSS+QA+IEIDSL+EGIDFYT+ITRARFEEL ADLFRST++PVEK+LRDAK+DK +H
Sbjct: 274 TLSSSSQASIEIDSLFEGIDFYTNITRARFEELCADLFRSTMDPVEKSLRDAKMDKSQVH 333
Query: 184 DIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXX 363
DIVLVGGSTRIPK+QKLL DLF+GKELNKSINPDE ILSGDKSEAVQD
Sbjct: 334 DIVLVGGSTRIPKVQKLLSDLFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQDLL 393
Query: 364 XXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKD 543
GIETAGGVMTALIKRN YSDNQPGVLIQVYEGERAMTKD
Sbjct: 394 LLDVAPLSLGIETAGGVMTALIKRNTTIPTKTAQTFTTYSDNQPGVLIQVYEGERAMTKD 453
Query: 544 NNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSRC*KGNWKR 681
NNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVS K K+
Sbjct: 454 NNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSATDKSTGKQ 499
Score = 56.6 bits (135), Expect = 8e-08
Identities = 32/62 (51%), Positives = 36/62 (58%)
Frame = +2
Query: 656 AVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAARIPLKVMLIK* 835
A +K TGK+NKITITNDKGRLSKDDIERMV RI A+ L+
Sbjct: 491 ATDKSTGKQNKITITNDKGRLSKDDIERMVNEAEKYKADDEAQKDRIGAKNGLESYAFNL 550
Query: 836 KQ 841
KQ
Sbjct: 551 KQ 552
>sp|Q9U639|HSP7D_MANSE Heat shock 70 kDa protein cognate 4 (Hsc 70-4)
Length = 652
Score = 319 bits (817), Expect = 7e-87
Identities = 167/217 (76%), Positives = 174/217 (80%)
Frame = +1
Query: 4 TLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIH 183
TLSSS QA+IEIDSL+EGIDFYTSITRARFEELNADLFRST+EPVEK+LRDAK+DK IH
Sbjct: 273 TLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKSQIH 332
Query: 184 DIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXX 363
DIVLVGGSTRIPK+QKLLQD FNGKELNKSINPDE IL GDKSE VQD
Sbjct: 333 DIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLL 392
Query: 364 XXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKD 543
GIETAGGVMT LIKRN YSDNQPGVLIQV+EGERAMTKD
Sbjct: 393 LLDVTPLSLGIETAGGVMTTLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVFEGERAMTKD 452
Query: 544 NNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVS 654
NNLLGKFEL GIPPAPRGVPQIEVTFDIDANGILNVS
Sbjct: 453 NNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVS 489
Score = 54.7 bits (130), Expect = 3e-07
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +2
Query: 656 AVEKGTGKENKITITNDKGRLSKDDIERMV 745
AVEK T KENKITITNDKGRLSK++IERMV
Sbjct: 490 AVEKSTNKENKITITNDKGRLSKEEIERMV 519
>sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70)
Length = 644
Score = 317 bits (813), Expect = 2e-86
Identities = 167/225 (74%), Positives = 178/225 (79%)
Frame = +1
Query: 4 TLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIH 183
TLSSS+QA+IEIDSL+EGIDFYTSITRARFEE+ +DLFR TLEPVEKALRDAK+DK IH
Sbjct: 275 TLSSSSQASIEIDSLFEGIDFYTSITRARFEEMCSDLFRGTLEPVEKALRDAKMDKAQIH 334
Query: 184 DIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXX 363
D+VLVGGSTRIPK+QKLLQD FNG+ELNKSINPDE ILSGDKSE VQD
Sbjct: 335 DVVLVGGSTRIPKVQKLLQDFFNGRELNKSINPDEAVAYGAAIQAAILSGDKSENVQDLL 394
Query: 364 XXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKD 543
GIETAGGVMTALIKRN YSDNQPGV+IQVYEGERAMTKD
Sbjct: 395 LLDVAPLSLGIETAGGVMTALIKRNTTIPSKQTQTFTTYSDNQPGVMIQVYEGERAMTKD 454
Query: 544 NNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSRC*KGNWK 678
NNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVS K K
Sbjct: 455 NNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGK 499
Score = 58.2 bits (139), Expect = 3e-08
Identities = 31/54 (57%), Positives = 36/54 (66%)
Frame = +2
Query: 656 AVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAARIPLK 817
AV+K TGKENKITITNDKGRLSK+DIERMV +IAA+ L+
Sbjct: 492 AVDKSTGKENKITITNDKGRLSKEDIERMVQDADKYKAEDDAQREKIAAKNSLE 545
>sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein
Length = 644
Score = 317 bits (811), Expect = 3e-86
Identities = 167/226 (73%), Positives = 180/226 (79%)
Frame = +1
Query: 4 TLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIH 183
TLSSS+QA+IEIDSL+EGIDFYT+ITRARFEEL ADLFRST++PVEKALRDAK+DK +H
Sbjct: 272 TLSSSSQASIEIDSLFEGIDFYTNITRARFEELCADLFRSTMDPVEKALRDAKMDKAQVH 331
Query: 184 DIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXX 363
DIVLVGGSTRIPK+QKLL D F+GKELNKSINPDE ILSGDKSEAVQD
Sbjct: 332 DIVLVGGSTRIPKVQKLLSDFFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQDLL 391
Query: 364 XXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKD 543
GIETAGGVMTALIKRN YSDNQPGVLIQVYEGERA+TKD
Sbjct: 392 LLDVAPLSLGIETAGGVMTALIKRNTTIPTKTSETFTTYSDNQPGVLIQVYEGERALTKD 451
Query: 544 NNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSRC*KGNWKR 681
NNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVS K K+
Sbjct: 452 NNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAQDKSTGKQ 497
Score = 56.6 bits (135), Expect = 8e-08
Identities = 32/62 (51%), Positives = 37/62 (59%)
Frame = +2
Query: 656 AVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAARIPLKVMLIK* 835
A +K TGK+NKITITNDKGRLSKD+IERMV RIAA+ L+
Sbjct: 489 AQDKSTGKQNKITITNDKGRLSKDEIERMVQEAEKYKADDEAQKDRIAAKNALESYAFNM 548
Query: 836 KQ 841
KQ
Sbjct: 549 KQ 550
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,637,403
Number of Sequences: 369166
Number of extensions: 1256111
Number of successful extensions: 4313
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3768
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8293644780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)