Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_008_A10
(841 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P57088|TMM33_HUMAN Transmembrane protein 33 (DB83 protein) 171 3e-42
sp|Q9Z142|TMM33_RAT Transmembrane protein 33 (DB83 protein) 171 3e-42
sp|Q9CR67|TMM33_MOUSE Transmembrane protein 33 (DB83 protein) 170 4e-42
sp|Q9XWV0|TMM33_CAEEL Hypothetical UPF0121 protein Y37D8A.1... 137 4e-32
sp|Q9V447|KRH2_DROME Kr-h2 protein 118 2e-26
sp|P53217|YG1I_YEAST Hypothetical 33.3 kDa protein in VMA7-... 34 0.57
sp|Q9BVK2|ALG8_HUMAN Probable dolichyl pyrophosphate Glc1Ma... 32 2.2
sp|Q4L3Q4|PROP_STAHJ Putative proline/betaine transporter 32 2.2
sp|Q9V931|OB57C_DROME General odorant-binding protein 57c p... 30 6.4
>sp|P57088|TMM33_HUMAN Transmembrane protein 33 (DB83 protein)
Length = 247
Score = 171 bits (432), Expect = 3e-42
Identities = 89/237 (37%), Positives = 145/237 (61%), Gaps = 1/237 (0%)
Frame = +2
Query: 80 GVIDYFIDNKSLAVLLISRLATIICGLCAALPILSGNTHPAIWYYRSHMASVATSALRLF 259
G + + + NK + +SRL T+ C LP+L G A +Y R+ +A+ TSALRL
Sbjct: 13 GAVQFMMTNKLDTAMWLSRLFTVYCSALFVLPLL-GLHEAASFYQRALLANALTSALRLH 71
Query: 260 EAIQTENQPMGFNRATLSLLLSKDACHYLIFSVMFLSASPVTISIIPILLFALLHVSSFI 439
+ + +RA L+ L +D+CHYL++S++F+++ PVT+SI P+LLF+LLH +++
Sbjct: 72 QRLPH----FQLSRAFLAQALLEDSCHYLLYSLIFVNSYPVTMSIFPVLLFSLLHAATYT 127
Query: 440 TKLIQTCNV-SLGFFKKLIDKVTSNQVFLLQVIAINEVMLMPIIIITVLTGGGNIFLPFV 616
K++ SL + ++DK+++NQ +L+ IA NE+ LMP + + +G G++ PF+
Sbjct: 128 KKVLDARGSNSLPLLRSVLDKLSANQQNILKFIACNEIFLMPATVFMLFSGQGSLLQPFI 187
Query: 617 YYRFIFLRYSSIRNPYSKMVFLHLRMSVEQLAANPKCPAVIGNIMLKMRDIVIRLCP 787
YYRF+ LRYSS RNPY + +F LR+ VE + P CP + + L+ + RL P
Sbjct: 188 YYRFLTLRYSSRRNPYCRTLFNELRIVVEHIIMKPACPLFVRRLCLQSIAFISRLAP 244
>sp|Q9Z142|TMM33_RAT Transmembrane protein 33 (DB83 protein)
Length = 247
Score = 171 bits (432), Expect = 3e-42
Identities = 89/237 (37%), Positives = 145/237 (61%), Gaps = 1/237 (0%)
Frame = +2
Query: 80 GVIDYFIDNKSLAVLLISRLATIICGLCAALPILSGNTHPAIWYYRSHMASVATSALRLF 259
G + + + NK + +SRL T+ C LP+L G A +Y R+ +A+ TSALRL
Sbjct: 13 GAVQFMMTNKLDTAMWLSRLFTVYCSALFVLPLL-GLHEAASFYQRALLANALTSALRLH 71
Query: 260 EAIQTENQPMGFNRATLSLLLSKDACHYLIFSVMFLSASPVTISIIPILLFALLHVSSFI 439
+ + +RA L+ L +D+CHYL++S++F+++ PVT+SI P+LLF+LLH +++
Sbjct: 72 QRLPH----FQLSRAFLAQALLEDSCHYLLYSLIFVNSYPVTMSIFPVLLFSLLHAATYT 127
Query: 440 TKLIQTCNV-SLGFFKKLIDKVTSNQVFLLQVIAINEVMLMPIIIITVLTGGGNIFLPFV 616
K++ SL + ++DK+++NQ +L+ IA NE+ LMP + + +G G++ PF+
Sbjct: 128 KKVLDAKGSNSLPLLRSVLDKLSTNQQNILKFIACNEIFLMPATVFMLFSGQGSLLQPFI 187
Query: 617 YYRFIFLRYSSIRNPYSKMVFLHLRMSVEQLAANPKCPAVIGNIMLKMRDIVIRLCP 787
YYRF+ LRYSS RNPY + +F LR+ VE + P CP + + L+ + RL P
Sbjct: 188 YYRFLTLRYSSRRNPYCRNLFNELRIVVEHIIMKPSCPLFVRRLCLQSIAFISRLAP 244
>sp|Q9CR67|TMM33_MOUSE Transmembrane protein 33 (DB83 protein)
Length = 247
Score = 170 bits (431), Expect = 4e-42
Identities = 89/237 (37%), Positives = 144/237 (60%), Gaps = 1/237 (0%)
Frame = +2
Query: 80 GVIDYFIDNKSLAVLLISRLATIICGLCAALPILSGNTHPAIWYYRSHMASVATSALRLF 259
G + + + NK + +SRL T+ C LP+L G A +Y R+ +A+ TSALRL
Sbjct: 13 GAVQFMMTNKLDTAMWLSRLFTVYCSALFVLPLL-GLHEAASFYQRALLANALTSALRLH 71
Query: 260 EAIQTENQPMGFNRATLSLLLSKDACHYLIFSVMFLSASPVTISIIPILLFALLHVSSFI 439
+ + +RA L+ L +D+CHYL++S++F+++ PVT+SI P+LLF+LLH +++
Sbjct: 72 QRLPH----FQLSRAFLAQALLEDSCHYLLYSLIFVNSYPVTMSIFPVLLFSLLHAATYT 127
Query: 440 TKLIQTCNV-SLGFFKKLIDKVTSNQVFLLQVIAINEVMLMPIIIITVLTGGGNIFLPFV 616
K++ SL + +DK+++NQ +L+ IA NE+ LMP + + +G G++ PF+
Sbjct: 128 KKVLDAKGSNSLPLLRSFLDKLSTNQQNILKFIACNEIFLMPATVFMLFSGQGSLLQPFI 187
Query: 617 YYRFIFLRYSSIRNPYSKMVFLHLRMSVEQLAANPKCPAVIGNIMLKMRDIVIRLCP 787
YYRF+ LRYSS RNPY + +F LR+ VE + P CP + + L+ + RL P
Sbjct: 188 YYRFLTLRYSSRRNPYCRNLFNELRIVVEHIIMKPSCPLFVRRLCLQSIAFISRLAP 244
>sp|Q9XWV0|TMM33_CAEEL Hypothetical UPF0121 protein Y37D8A.17 in chromosome I
Length = 271
Score = 137 bits (345), Expect = 4e-32
Identities = 75/236 (31%), Positives = 129/236 (54%), Gaps = 1/236 (0%)
Frame = +2
Query: 83 VIDYFIDNKSLAVLLISRLATIICGLCAALPILS-GNTHPAIWYYRSHMASVATSALRLF 259
+ Y N VL +R+ T+ L +P + H A YY+ AS AT ALRL
Sbjct: 38 ISQYVSANTMECVLFAARVLTVFFALNYMIPFIGLVPAHSA--YYKIFAASAATFALRLH 95
Query: 260 EAIQTENQPMGFNRATLSLLLSKDACHYLIFSVMFLSASPVTISIIPILLFALLHVSSFI 439
IQ + N + L+ +D+ HYL++SV+FL A+PV+++ +P+ ++A LH +F+
Sbjct: 96 TRIQGQ---FALNAQFIQRLIIEDSFHYLVYSVVFLMAAPVSMAALPVTIYAALHACTFM 152
Query: 440 TKLIQTCNVSLGFFKKLIDKVTSNQVFLLQVIAINEVMLMPIIIITVLTGGGNIFLPFVY 619
TK+++ + KL L +IA +E+ L+P+++ + +G G++ LPF Y
Sbjct: 153 TKILRETGHTSSIIPKLEQFTAHQTQNALGIIACSEIFLVPLLVSLIFSGKGSLLLPFAY 212
Query: 620 YRFIFLRYSSIRNPYSKMVFLHLRMSVEQLAANPKCPAVIGNIMLKMRDIVIRLCP 787
YRF+ LRY+S RNP ++ F +R S++ +A + CP I +++ + D + P
Sbjct: 213 YRFLSLRYASRRNPSTRQAFAQMRGSLQNVAMSSSCPRPISSLIYRAIDFISARAP 268
>sp|Q9V447|KRH2_DROME Kr-h2 protein
Length = 276
Score = 118 bits (295), Expect = 2e-26
Identities = 72/247 (29%), Positives = 124/247 (50%), Gaps = 1/247 (0%)
Frame = +2
Query: 53 QGDQQTIKKGVIDYFIDNKSLAVLLISRLATIICGLCAALPILSGNTHPAIWYYRSHMAS 232
Q Q + ++ +F N+ + L RL I + LPI + + + +A+
Sbjct: 31 QSQSQNVPAKLLQHFQTNRIDSALWALRLLVIFFTVSYVLPIFTSQQSA---FSKVMLAN 87
Query: 233 VATSALRLFEAIQTENQPMGFNRATLSLLLSKDACHYLIFSVMFLSASPVTISIIPILLF 412
A SALRL + + F+R L+ L ++D+CHY+++S++F + P + +IP+LL+
Sbjct: 88 AAISALRLHQRLPA----FAFSREFLARLFAEDSCHYMMYSLIFFNIRPSLLVLIPVLLY 143
Query: 413 ALLHVSSFITKLIQTCNVSLGFFKKLIDKVTSNQVF-LLQVIAINEVMLMPIIIITVLTG 589
++LH SS+ KL+ + + + I + Q +L+ A E+ +MP I+
Sbjct: 144 SVLHASSYSLKLLDLIGQNSWWGARFIISIVEFQAANILKATAFCEIFIMPYAIVLAFMN 203
Query: 590 GGNIFLPFVYYRFIFLRYSSIRNPYSKMVFLHLRMSVEQLAANPKCPAVIGNIMLKMRDI 769
+ P +YY ++ +RYSS RNPY + F LR++ E LAA + P I+
Sbjct: 204 HAGLMTPVIYYHYLVMRYSSRRNPYPRNAFAELRITFEALAA--RSPPAFAKIIRGGIGF 261
Query: 770 VIRLCPQ 790
V RL PQ
Sbjct: 262 VNRLAPQ 268
>sp|P53217|YG1I_YEAST Hypothetical 33.3 kDa protein in VMA7-RPS25A intergenic region
Length = 278
Score = 33.9 bits (76), Expect = 0.57
Identities = 38/174 (21%), Positives = 79/174 (45%), Gaps = 5/174 (2%)
Frame = +2
Query: 260 EAIQTENQPMGFNRATLSLLLSKDACHYLIFSVMFLSASPVTISIIPILLFALLHVSSFI 439
E++ + +G N LL S++ LI + F I+P ++ + LH +
Sbjct: 103 ESVTMQQNWVGLNPTWNDLLSSENFHTLLIACLWFFGGGKSFYKILPYMILSYLH----L 158
Query: 440 TKLIQTCNVSLGFFKKLIDKVTSNQVFLLQVIAINEVM-LMPIIIITVL-TGGGNIFLPF 613
TK+ N L K+ +T +L ++A +E++ ++ + + T+L G + F+
Sbjct: 159 TKM----NYELNANKEEKIPLTPKDRKMLHLLAYSELLVILALTLDTILFKTGTSGFMLV 214
Query: 614 VYYRFIFLRYSSIRNPYSKMVFLHLRMSVEQLAA---NPKCPAVIGNIMLKMRD 766
+Y +LR + +PY+++ L L + E+ K + I +KM++
Sbjct: 215 IYVGIYWLRLNF--SPYAQVAVLELLVKFEKYVPKKYRDKWQVIKNFIYMKMKE 266
>sp|Q9BVK2|ALG8_HUMAN Probable dolichyl pyrophosphate Glc1Man9GlcNAc2
alpha-1,3-glucosyltransferase
(Dolichyl-P-Glc:Glc1Man9GlcNAc2-PP-dolichyl
glucosyltransferase) (HUSSY-02)
Length = 526
Score = 32.0 bits (71), Expect = 2.2
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 18/123 (14%)
Frame = +2
Query: 128 ISRLATIICGLCAALPILSGNTHPAIWYY----RSHMASVATSALRLF--------EAIQ 271
++ LAT+IC L A LP + +W+ R + + AL F +AI
Sbjct: 332 VTPLATLICTLIAILPSIF-----CLWFKPQGPRGFLRCLTLCALSSFMFGWHVHEKAIL 386
Query: 272 TENQPMGF------NRATLSLLLSKDACHYLIFSVMFLSASPVTISIIPILLFALLHVSS 433
PM A++ L+L+ HY +F ++F +A + I I+ +LLF + +SS
Sbjct: 387 LAILPMSLLSVGKAGDASIFLILTTTG-HYSLFPLLF-TAPELPIKILLMLLFTIYSISS 444
Query: 434 FIT 442
T
Sbjct: 445 LKT 447
>sp|Q4L3Q4|PROP_STAHJ Putative proline/betaine transporter
Length = 468
Score = 32.0 bits (71), Expect = 2.2
Identities = 28/122 (22%), Positives = 57/122 (46%), Gaps = 9/122 (7%)
Frame = +2
Query: 353 SVMFLSASPVTISI-IPILLFALLHVSSFITKLIQTCNVSLG-----FFKKLIDKVTSNQ 514
+V+F + + T++ +P L ++ + T ++ TC +++ FF KL DK+ +
Sbjct: 252 AVVFFNVTNYTVTAYLPTYLGQIVKIDETTTSVLITCVMAVMIPLALFFGKLADKIGEKK 311
Query: 515 VFLLQVIAINEVMLMPIIIITVLTGGGNIFL---PFVYYRFIFLRYSSIRNPYSKMVFLH 685
VFL I + L+ I+ ++L F+ F+ F+ +++ M F H
Sbjct: 312 VFL---IGTGGLTLLSIVAFSLLNTKSLPFIILGVFILGFFLSTYEATMPGSLPTMFFTH 368
Query: 686 LR 691
+R
Sbjct: 369 IR 370
>sp|Q9V931|OB57C_DROME General odorant-binding protein 57c precursor
Length = 149
Score = 30.4 bits (67), Expect = 6.4
Identities = 12/45 (26%), Positives = 30/45 (66%)
Frame = +2
Query: 380 VTISIIPILLFALLHVSSFITKLIQTCNVSLGFFKKLIDKVTSNQ 514
+T+S++ I +LL +++++ + + N+S F++LID+ +S +
Sbjct: 10 LTVSVVSIQSLSLLEETNYVSDCLASNNISQAEFQELIDRNSSEE 54
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,758,720
Number of Sequences: 369166
Number of extensions: 1706853
Number of successful extensions: 4792
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4780
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8197207050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)