Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_007_P15
(533 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q8N8L2|ZN491_HUMAN Zinc finger protein 491 41 0.002
sp|P52737|ZN136_HUMAN Zinc finger protein 136 40 0.003
sp|Q9ULM2|ZN490_HUMAN Zinc finger protein 490 39 0.006
sp|Q92766|RREB1_HUMAN RAS-responsive element binding protei... 39 0.006
sp|P16415|ZF36_HUMAN Zinc finger protein ZFP-36 39 0.008
sp|Q9HC78|ZBT20_HUMAN Zinc finger and BTB domain containing... 39 0.008
sp|P38621|ZN12_MICSA Zinc finger protein ZFMSA12A 39 0.010
sp|Q8TBZ8|ZN564_HUMAN Zinc finger protein 564 39 0.010
sp|Q9WTJ2|OVOL1_MOUSE Putative transcription factor Ovo-lik... 38 0.014
sp|P17024|ZNF20_HUMAN Zinc finger protein 20 (Zinc finger p... 38 0.014
>sp|Q8N8L2|ZN491_HUMAN Zinc finger protein 491
Length = 437
Score = 40.8 bits (94), Expect = 0.002
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 17 RRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
+RH SHTG + YKC+ C K FTC + +H R HT
Sbjct: 287 QRHERSHTGEKPYKCKQCGKAFTCSTSFQYHERTHT 322
Score = 37.0 bits (84), Expect = 0.030
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 17 RRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
RRH +HTG + YKC+ C K F C + H R HT
Sbjct: 203 RRHERTHTGEKPYKCKECGKAFNCPSSFHRHERTHT 238
Score = 37.0 bits (84), Expect = 0.030
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 17 RRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
RRHM HTG R +KC+IC K F + H R HT
Sbjct: 259 RRHMRMHTGERPHKCKICGKAFYSPSSFQRHERSHT 294
Score = 34.7 bits (78), Expect = 0.15
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 2 SAYLVRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQH 118
SA +R H +HTG + Y+C+ C K F CV + H R H
Sbjct: 338 SAKYIRIHGRTHTGEKPYECKQCGKAFHCVSSFHRHERTH 377
Score = 33.5 bits (75), Expect = 0.33
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 14 VRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
+RR+M +H+G YKC+ C K C+ H R HT
Sbjct: 118 IRRYMVTHSGDGPYKCKFCGKALDCLSLYLTHERTHT 154
Score = 32.7 bits (73), Expect = 0.57
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 20 RHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
RH +H G + Y+C+ C K FTC H R HT
Sbjct: 372 RHERTHAGEKPYECKHCGKAFTCSIYIRIHERIHT 406
Score = 31.6 bits (70), Expect = 1.3
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 14 VRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHTTDL 130
+R H HTG + Y+C+ C K F C H R HT ++
Sbjct: 398 IRIHERIHTGEKPYQCKECGKAFIRSSYCRKHERTHTINI 437
Score = 30.0 bits (66), Expect = 3.7
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 14 VRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
VR H +HTG + Y+C+ C K F + H R HT
Sbjct: 174 VRIHERTHTGEKPYECKECGKSFNFSSSFRRHERTHT 210
Score = 29.6 bits (65), Expect = 4.8
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 2 SAYLVRRHMNSHTGV-RYKCRICDKPFTCVYACTWHMRQHT 121
S YL H +HTG RY+C+ C K F+ + H R HT
Sbjct: 144 SLYLT--HERTHTGEKRYECKQCGKAFSWHSSVRIHERTHT 182
Score = 29.6 bits (65), Expect = 4.8
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 20 RHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
RH +HTG + Y+C++ K + + + HMR HT
Sbjct: 232 RHERTHTGEKPYECKLYGKALSRLISFRRHMRMHT 266
>sp|P52737|ZN136_HUMAN Zinc finger protein 136
Length = 540
Score = 40.4 bits (93), Expect = 0.003
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +2
Query: 17 RRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHTTD 127
R H SHTG + Y+C+ C K FTC+ + HM +HT D
Sbjct: 212 RTHERSHTGEKPYECQECGKAFTCITSVRRHMIKHTGD 249
Score = 39.3 bits (90), Expect = 0.006
Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 14 VRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
VRRHM HTG YKC++C KPF + + H R HT
Sbjct: 239 VRRHMIKHTGDGPYKCKVCGKPFHSLSSFQVHERIHT 275
Score = 38.5 bits (88), Expect = 0.010
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 14 VRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
+RRHM HTG YKC++C KPF + H R HT
Sbjct: 379 MRRHMIKHTGEGPYKCKVCGKPFHSLSPFRIHERTHT 415
Score = 33.9 bits (76), Expect = 0.26
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 14 VRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
+RRH+ +H+G YKC++C K F H R HT
Sbjct: 183 IRRHIITHSGYTPYKCKVCGKAFDYPSRFRTHERSHT 219
Score = 33.9 bits (76), Expect = 0.26
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 2 SAYLVRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
SA + H +HTG + Y+C+ C + F+C+ + HM +HT
Sbjct: 347 SASTFQIHERTHTGEKPYECKECGEAFSCIPSMRRHMIKHT 387
Score = 31.2 bits (69), Expect = 1.7
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 17 RRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHTTD 127
R H +HTG + Y C+ C K ++C + HM H D
Sbjct: 492 RLHERTHTGQKPYHCKECGKAYSCRASFQRHMLTHAED 529
Score = 30.8 bits (68), Expect = 2.2
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +2
Query: 23 HMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
H HTG + +KC+ C K F+C H R HT
Sbjct: 270 HERIHTGEKPFKCKQCGKAFSCSPTLRIHERTHT 303
Score = 30.0 bits (66), Expect = 3.7
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 14 VRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
+R H +HTG + Y+C+ C K F+ + + H R HT
Sbjct: 295 LRIHERTHTGEKPYECKQCGKAFSYLPSLRLHERIHT 331
Score = 28.9 bits (63), Expect = 8.2
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 2 SAYLVRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
S+ +R H +HTG + Y+C+ C K F+ + + H HT
Sbjct: 431 SSTSIRIHERTHTGEKPYECKQCGKAFSYLNSFRTHEMIHT 471
>sp|Q9ULM2|ZN490_HUMAN Zinc finger protein 490
Length = 529
Score = 39.3 bits (90), Expect = 0.006
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +2
Query: 14 VRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
+RRH SHTGV+ +C+ C K FTC+ + H R HT
Sbjct: 461 LRRHERSHTGVKPCECKQCGKAFTCLNSLKVHKRIHT 497
Score = 33.9 bits (76), Expect = 0.26
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 14 VRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQH 118
+R+H+ +HTGV+ Y C+ C + F +C H R H
Sbjct: 349 LRKHVKTHTGVQPYTCKKCGEAFKSSSSCEVHERTH 384
Score = 33.5 bits (75), Expect = 0.33
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 14 VRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
+RRH +HTG + YKC+ C K F H R HT
Sbjct: 265 LRRHEKNHTGEKPYKCKQCGKAFIYYQPFLTHERTHT 301
Score = 32.3 bits (72), Expect = 0.74
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 14 VRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
+R H HTG + Y+C+ C K F +++ H+R HT
Sbjct: 209 IRTHERIHTGEKPYECKECGKAFAFLFSFRNHIRIHT 245
Score = 30.4 bits (67), Expect = 2.8
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 17 RRHMNSHTG-VRYKCRICDKPFTCVYACTWHMRQHT 121
R H+ HTG Y+C+ C K F + A H + HT
Sbjct: 238 RNHIRIHTGETPYECKECGKAFRYLTALRRHEKNHT 273
Score = 30.4 bits (67), Expect = 2.8
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 23 HMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
H +HTG + Y+C+ C K F+C H + HT
Sbjct: 296 HERTHTGEKPYECKQCGKAFSCPTYLRSHEKTHT 329
>sp|Q92766|RREB1_HUMAN RAS-responsive element binding protein 1 (RREB-1) (Raf-responsive
zinc finger protein LZ321)
Length = 755
Score = 39.3 bits (90), Expect = 0.006
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 20 RHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQH 118
RHM SHTG R YKC+ C++ FT ++ H R H
Sbjct: 597 RHMRSHTGERPYKCQTCERTFTLKHSLVRHQRIH 630
>sp|P16415|ZF36_HUMAN Zinc finger protein ZFP-36
Length = 582
Score = 38.9 bits (89), Expect = 0.008
Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 2 SAYLVRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
S YL RH +HTG + YKC C K F+C Y H R HT
Sbjct: 295 STYL--RHERTHTGEKPYKCTQCGKAFSCYYYTRLHERTHT 333
Score = 34.7 bits (78), Expect = 0.15
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 17 RRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHTTD 127
+ H +HTG + Y+C+ C K F+C + H R HT +
Sbjct: 493 QNHETTHTGEKPYECKECGKAFSCFKYLSQHKRTHTVE 530
Score = 33.9 bits (76), Expect = 0.26
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 17 RRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
RRHM HTG +KC+IC K F C + H HT
Sbjct: 354 RRHMIRHTGDGPHKCKICGKGFDCPSSVRNHETTHT 389
Score = 32.7 bits (73), Expect = 0.57
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 17 RRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
R HM +HTG KC+IC K F C H R HT
Sbjct: 410 RSHMITHTGDGPQKCKICGKAFGCPSLFQRHERTHT 445
Score = 32.0 bits (71), Expect = 0.97
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 14 VRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
+RRHM +H G YKC++C K F H R HT
Sbjct: 213 LRRHMAAHHGDGPYKCKLCGKAFVWPSLFHLHERTHT 249
Score = 30.4 bits (67), Expect = 2.8
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 8 YLVRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHTTD 127
Y R H +HTG + Y C+ C K F + HM +HT D
Sbjct: 323 YYTRLHERTHTGEQPYACKQCGKTFYHHTSFRRHMIRHTGD 363
Score = 30.4 bits (67), Expect = 2.8
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 11 LVRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
L +RH +HTG + Y+C+ C K F+ + H HT
Sbjct: 436 LFQRHERTHTGEKPYQCKQCGKAFSLAGSLRRHEATHT 473
Score = 29.6 bits (65), Expect = 4.8
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 14 VRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHTTD 127
VR H +HTG + Y+C+ C K + + HM HT D
Sbjct: 381 VRNHETTHTGEKPYECKQCGKVLSHSSSFRSHMITHTGD 419
Score = 29.6 bits (65), Expect = 4.8
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 14 VRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
+RRH +HTGV+ YKC+ C K F+ + + H HT
Sbjct: 465 LRRHEATHTGVKPYKCQ-CGKAFSDLSSFQNHETTHT 500
Score = 29.3 bits (64), Expect = 6.3
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 2 SAYLVRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
S+YL RH HTG + Y+C+ C K F H R HT
Sbjct: 267 SSYL--RHERIHTGEKAYECKQCSKAFPDYSTYLRHERTHT 305
>sp|Q9HC78|ZBT20_HUMAN Zinc finger and BTB domain containing protein 20 (Zinc finger
protein 288) (Dendritic-derived BTB/POZ zinc finger
protein)
Length = 741
Score = 38.9 bits (89), Expect = 0.008
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +2
Query: 8 YLVRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQH 118
YL++ HM +HTGVR Y+C IC+K FT + HMR H
Sbjct: 620 YLIK-HMVTHTGVRAYQCSICNKRFTQKSSLNVHMRLH 656
>sp|P38621|ZN12_MICSA Zinc finger protein ZFMSA12A
Length = 415
Score = 38.5 bits (88), Expect = 0.010
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +2
Query: 14 VRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHTTDLNNPI 142
+++H +HTGVR Y C++C K +TC+ H++ H+ N +
Sbjct: 372 LKKHSMNHTGVRPYACQLCAKTYTCLNHLKRHLKTHSVIQNQSV 415
Score = 37.4 bits (85), Expect = 0.023
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 2 SAYLVRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
SA ++ H +HTG + YKC +C + FT T HMR HT
Sbjct: 312 SAGELQIHRRTHTGEKPYKCSVCGRGFTMASKVTLHMRVHT 352
Score = 31.6 bits (70), Expect = 1.3
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 23 HMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
HM SHTG R ++C C K F+ H+R HT
Sbjct: 263 HMRSHTGERPFQCTYCGKRFSVSGNLNIHVRTHT 296
>sp|Q8TBZ8|ZN564_HUMAN Zinc finger protein 564
Length = 553
Score = 38.5 bits (88), Expect = 0.010
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 14 VRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
VRRHM HTG YKC++C + F C + H R HT
Sbjct: 380 VRRHMIKHTGDGPYKCQVCGRAFDCPSSFQIHERTHT 416
Score = 38.1 bits (87), Expect = 0.014
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 14 VRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
+R+HM HTG YKC++C K F C + H R HT
Sbjct: 436 IRKHMILHTGDGPYKCQVCGKAFDCPSSVRTHERTHT 472
Score = 33.9 bits (76), Expect = 0.26
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 14 VRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHTTD 127
VR H +HTG + Y+C+ C K F + + HM +HT D
Sbjct: 352 VRTHERTHTGEKPYECKECGKAFISLPSVRRHMIKHTGD 390
Score = 32.3 bits (72), Expect = 0.74
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 17 RRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHTTD 127
RRH +HTG + Y C C K F + + HM +HT D
Sbjct: 157 RRHERTHTGEKPYACPECGKAFISLPSVRRHMIKHTGD 194
Score = 32.0 bits (71), Expect = 0.97
Identities = 18/37 (48%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 14 VRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
VRRHM HTG YKC+ C K F H R HT
Sbjct: 184 VRRHMIKHTGDGPYKCQECGKAFDRPSLFQIHERTHT 220
Score = 32.0 bits (71), Expect = 0.97
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 14 VRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
VR H +HTG + Y+C+ C K F + H R HT
Sbjct: 464 VRTHERTHTGEKPYECKECGKAFNYASSIRIHERTHT 500
Score = 31.6 bits (70), Expect = 1.3
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 14 VRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
VR+H +HTG + Y+C C K F+ H R HT
Sbjct: 324 VRKHERTHTGEKPYECNKCGKTFSSSSNVRTHERTHT 360
Score = 31.2 bits (69), Expect = 1.7
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 23 HMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHTTD 127
H +HTG + Y+C++C K F + HM HT D
Sbjct: 411 HERTHTGEKPYECQVCGKAFISLKRIRKHMILHTGD 446
Score = 30.0 bits (66), Expect = 3.7
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 11 LVRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHTTD 127
L + H +HTG + Y+C+ C K F + + HM +HT D
Sbjct: 211 LFQIHERTHTGEKPYECQECAKAFISLPSFQRHMIRHTGD 250
Score = 29.6 bits (65), Expect = 4.8
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 14 VRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHTTD 127
+R H +HTG + Y+C+ C K F+ + H R H D
Sbjct: 492 IRIHERTHTGEKPYECKQCGKTFSYSSSFQRHERAHNGD 530
Score = 28.9 bits (63), Expect = 8.2
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 11 LVRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHTTD 127
L R H +HTG + ++C+ C K F HM +HT D
Sbjct: 267 LFRIHERTHTGEKPHECKQCGKAFISFTNFQSHMIRHTGD 306
>sp|Q9WTJ2|OVOL1_MOUSE Putative transcription factor Ovo-like 1 (mOvo1) (mOvo1a)
Length = 267
Score = 38.1 bits (87), Expect = 0.014
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +2
Query: 14 VRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQ 115
++RH+ +HTGVR YKC +CDK FT + H+++
Sbjct: 161 LKRHVRTHTGVRPYKCSLCDKAFTQRCSLESHLKK 195
Score = 30.4 bits (67), Expect = 2.8
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +2
Query: 11 LVRRHMNSHTGV-RYKCRICDKPFTCVYACTWHMRQHT 121
++ RHM H V R+ C C K F + H+R HT
Sbjct: 132 MLNRHMKCHNDVKRHLCTYCGKGFNDTFDLKRHVRTHT 169
>sp|P17024|ZNF20_HUMAN Zinc finger protein 20 (Zinc finger protein KOX13) (DKFZp572P0920)
Length = 532
Score = 38.1 bits (87), Expect = 0.014
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 23 HMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
H +HTG + Y+C++C K FTC + +H R HT
Sbjct: 441 HERTHTGDKPYECKVCGKAFTCSSSIRYHERTHT 474
Score = 34.7 bits (78), Expect = 0.15
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 14 VRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
+RRH SHTG + Y+C+ C K F + +H HT
Sbjct: 270 IRRHKRSHTGEKPYECKQCGKVFISFSSIQYHKMTHT 306
Score = 34.7 bits (78), Expect = 0.15
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 14 VRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHTTD 127
+++H +HTG + Y+CR C K F C H + HT D
Sbjct: 326 LQKHGRTHTGEKPYECRQCGKAFRCTSDLQRHEKTHTED 364
Score = 34.3 bits (77), Expect = 0.20
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 14 VRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
+R H +HTG + Y+C+ C K F +C H R HT
Sbjct: 493 IRYHERTHTGEKPYQCKQCGKAFIRASSCREHERTHT 529
Score = 32.0 bits (71), Expect = 0.97
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 14 VRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
++RH H+G YKC+ C K F + C H R HT
Sbjct: 186 IQRHRVMHSGDGPYKCKFCGKAFYFLNLCLIHERIHT 222
Score = 32.0 bits (71), Expect = 0.97
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +2
Query: 23 HMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
H HTGV+ YKC+ C K FT H R HT
Sbjct: 217 HERIHTGVKPYKCKQCGKAFTRSTTLPVHERTHT 250
Score = 30.4 bits (67), Expect = 2.8
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 14 VRRHMNSHTGVR-YKCRICDKPFTCVYACTWHMRQHT 121
++ H +HTG + Y+C+ C K F C H R HT
Sbjct: 298 IQYHKMTHTGEKPYECKQCGKAFRCGSHLQKHGRTHT 334
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,082,784
Number of Sequences: 369166
Number of extensions: 979113
Number of successful extensions: 5539
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5510
length of database: 68,354,980
effective HSP length: 103
effective length of database: 49,327,275
effective search space used: 3650218350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)