Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_007_N21
(742 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q6RUV5|RAC1_RAT Ras-related C3 botulinum toxin substrate... 211 1e-54
sp|P40792|RAC1_DROME Ras-related protein Rac1 210 3e-54
sp|Q9TU25|RAC2_BOVIN Ras-related C3 botulinum toxin substra... 207 3e-53
sp|P15153|RAC2_HUMAN Ras-related C3 botulinum toxin substra... 206 7e-53
sp|P60764|RAC3_MOUSE Ras-related C3 botulinum toxin substra... 205 9e-53
sp|P48554|RAC2_DROME Ras-related protein Rac2 204 2e-52
sp|Q05144|RAC2_MOUSE Ras-related C3 botulinum toxin substra... 204 2e-52
sp|O88931|RAC2_CAVPO Ras-related C3 botulinum toxin substra... 202 8e-52
sp|O95916|RAC4_HUMAN Putative Ras-related C3 botulinum toxi... 201 2e-51
sp|Q03206|RAC1_CAEEL RAS-related protein rac-1 (Cell-corpse... 193 4e-49
>sp|Q6RUV5|RAC1_RAT Ras-related C3 botulinum toxin substrate 1 (p21-Rac1)
sp|P63001|RAC1_MOUSE Ras-related C3 botulinum toxin substrate 1 (p21-Rac1)
sp|P63000|RAC1_HUMAN Ras-related C3 botulinum toxin substrate 1 (p21-Rac1) (Ras-like
protein TC25)
sp|P62999|RAC1_CANFA Ras-related C3 botulinum toxin substrate 1 (p21-Rac1) (Rac2)
sp|P62998|RAC1_BOVIN Ras-related C3 botulinum toxin substrate 1 (p21-Rac1)
Length = 192
Score = 211 bits (538), Expect = 1e-54
Identities = 100/132 (75%), Positives = 116/132 (87%)
Frame = +2
Query: 2 AGQEDYDRLRPLSYPQTDVFLICFSLINSSSYENVRAKWYPEITHHCPNTPIILVGTKLD 181
AGQEDYDRLRPLSYPQTDVFLICFSL++ +S+ENVRAKWYPE+ HHCPNTPIILVGTKLD
Sbjct: 59 AGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLD 118
Query: 182 LRENLINGEAGRDRRNTPINYPQGLVLAKEIGAVKYLECSALTQKGLKSVFDEAIRAVLC 361
LR++ E ++++ TPI YPQGL +AKEIGAVKYLECSALTQ+GLK+VFDEAIRAVLC
Sbjct: 119 LRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLC 178
Query: 362 PKPPRKKTCKFL 397
P P +K+ K L
Sbjct: 179 PPPVKKRKRKCL 190
>sp|P40792|RAC1_DROME Ras-related protein Rac1
Length = 192
Score = 210 bits (535), Expect = 3e-54
Identities = 101/134 (75%), Positives = 115/134 (85%), Gaps = 2/134 (1%)
Frame = +2
Query: 2 AGQEDYDRLRPLSYPQTDVFLICFSLINSSSYENVRAKWYPEITHHCPNTPIILVGTKLD 181
AGQEDYDRLRPLSYPQTDVFLICFSL+N +S+ENVRAKWYPE+ HHCP+TPIILVGTKLD
Sbjct: 59 AGQEDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWYPEVRHHCPSTPIILVGTKLD 118
Query: 182 LRENLINGEAGRDRRNTPINYPQGLVLAKEIGAVKYLECSALTQKGLKSVFDEAIRAVLC 361
LR++ E RD++ PI YPQGL +AKEIGAVKYLECSALTQKGLK+VFDEAIR+VLC
Sbjct: 119 LRDDKNTIEKLRDKKLAPITYPQGLAMAKEIGAVKYLECSALTQKGLKTVFDEAIRSVLC 178
Query: 362 P--KPPRKKTCKFL 397
P +P K+ C L
Sbjct: 179 PVLQPKSKRKCALL 192
>sp|Q9TU25|RAC2_BOVIN Ras-related C3 botulinum toxin substrate 2 (p21-Rac2)
Length = 192
Score = 207 bits (526), Expect = 3e-53
Identities = 98/134 (73%), Positives = 116/134 (86%), Gaps = 2/134 (1%)
Frame = +2
Query: 2 AGQEDYDRLRPLSYPQTDVFLICFSLINSSSYENVRAKWYPEITHHCPNTPIILVGTKLD 181
AGQEDYDRLRPLSYPQTDVFLICFSL++ +SYENVRAKW+PE+ HHCP+TPIILVGTKLD
Sbjct: 59 AGQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHCPSTPIILVGTKLD 118
Query: 182 LRENLINGEAGRDRRNTPINYPQGLVLAKEIGAVKYLECSALTQKGLKSVFDEAIRAVLC 361
LR++ E ++++ PI YPQGL LAKEI +VKYLECSALTQ+GLK+VFDEAIRAVLC
Sbjct: 119 LRDDKDTIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVFDEAIRAVLC 178
Query: 362 PKP--PRKKTCKFL 397
P+P P+K+ C L
Sbjct: 179 PQPTRPQKRPCSIL 192
>sp|P15153|RAC2_HUMAN Ras-related C3 botulinum toxin substrate 2 (p21-Rac2) (Small G
protein) (GX)
Length = 192
Score = 206 bits (523), Expect = 7e-53
Identities = 98/134 (73%), Positives = 115/134 (85%), Gaps = 2/134 (1%)
Frame = +2
Query: 2 AGQEDYDRLRPLSYPQTDVFLICFSLINSSSYENVRAKWYPEITHHCPNTPIILVGTKLD 181
AGQEDYDRLRPLSYPQTDVFLICFSL++ +SYENVRAKW+PE+ HHCP+TPIILVGTKLD
Sbjct: 59 AGQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHCPSTPIILVGTKLD 118
Query: 182 LRENLINGEAGRDRRNTPINYPQGLVLAKEIGAVKYLECSALTQKGLKSVFDEAIRAVLC 361
LR++ E ++++ PI YPQGL LAKEI +VKYLECSALTQ+GLK+VFDEAIRAVLC
Sbjct: 119 LRDDKDTIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVFDEAIRAVLC 178
Query: 362 PKPPR--KKTCKFL 397
P+P R K+ C L
Sbjct: 179 PQPTRQQKRACSLL 192
>sp|P60764|RAC3_MOUSE Ras-related C3 botulinum toxin substrate 3 (p21-Rac3)
sp|P60763|RAC3_HUMAN Ras-related C3 botulinum toxin substrate 3 (p21-Rac3)
Length = 192
Score = 205 bits (522), Expect = 9e-53
Identities = 95/126 (75%), Positives = 112/126 (88%)
Frame = +2
Query: 2 AGQEDYDRLRPLSYPQTDVFLICFSLINSSSYENVRAKWYPEITHHCPNTPIILVGTKLD 181
AGQEDYDRLRPLSYPQTDVFLICFSL++ +S+ENVRAKWYPE+ HHCP+TPI+LVGTKLD
Sbjct: 59 AGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLD 118
Query: 182 LRENLINGEAGRDRRNTPINYPQGLVLAKEIGAVKYLECSALTQKGLKSVFDEAIRAVLC 361
LR++ E RD++ PI YPQGL +A+EIG+VKYLECSALTQ+GLK+VFDEAIRAVLC
Sbjct: 119 LRDDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVLC 178
Query: 362 PKPPRK 379
P P +K
Sbjct: 179 PPPVKK 184
>sp|P48554|RAC2_DROME Ras-related protein Rac2
Length = 192
Score = 204 bits (519), Expect = 2e-52
Identities = 97/134 (72%), Positives = 114/134 (85%), Gaps = 2/134 (1%)
Frame = +2
Query: 2 AGQEDYDRLRPLSYPQTDVFLICFSLINSSSYENVRAKWYPEITHHCPNTPIILVGTKLD 181
AGQEDYDRLRPLSYPQTDVFLICFSL+N +S+ENVRAKW+PE+ HHCP+ PIILVGTKLD
Sbjct: 59 AGQEDYDRLRPLSYPQTDVFLICFSLVNPASFENVRAKWFPEVRHHCPSVPIILVGTKLD 118
Query: 182 LRENLINGEAGRDRRNTPINYPQGLVLAKEIGAVKYLECSALTQKGLKSVFDEAIRAVLC 361
LR++ E +D++ TPI YPQGL +AKEI AVKYLECSALTQKGLK+VFDEAIR+VLC
Sbjct: 119 LRDDKQTIEKLKDKKLTPITYPQGLAMAKEIAAVKYLECSALTQKGLKTVFDEAIRSVLC 178
Query: 362 P--KPPRKKTCKFL 397
P + P++ C L
Sbjct: 179 PVVRGPKRHKCALL 192
>sp|Q05144|RAC2_MOUSE Ras-related C3 botulinum toxin substrate 2 (p21-Rac2) (EN-7
protein)
Length = 192
Score = 204 bits (519), Expect = 2e-52
Identities = 97/134 (72%), Positives = 115/134 (85%), Gaps = 2/134 (1%)
Frame = +2
Query: 2 AGQEDYDRLRPLSYPQTDVFLICFSLINSSSYENVRAKWYPEITHHCPNTPIILVGTKLD 181
AGQEDYDRLRPLSYPQTDVFLICFSL++ +SYENVRAKW+PE+ HHCP+TPIILVGTKLD
Sbjct: 59 AGQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHCPSTPIILVGTKLD 118
Query: 182 LRENLINGEAGRDRRNTPINYPQGLVLAKEIGAVKYLECSALTQKGLKSVFDEAIRAVLC 361
LR++ E ++++ PI YPQGL LAK+I +VKYLECSALTQ+GLK+VFDEAIRAVLC
Sbjct: 119 LRDDKDTIEKLKEKKLAPITYPQGLALAKDIDSVKYLECSALTQRGLKTVFDEAIRAVLC 178
Query: 362 PKPPR--KKTCKFL 397
P+P R K+ C L
Sbjct: 179 PQPTRQQKRPCSLL 192
>sp|O88931|RAC2_CAVPO Ras-related C3 botulinum toxin substrate 2 (p21-Rac2)
Length = 192
Score = 202 bits (514), Expect = 8e-52
Identities = 95/134 (70%), Positives = 114/134 (85%), Gaps = 2/134 (1%)
Frame = +2
Query: 2 AGQEDYDRLRPLSYPQTDVFLICFSLINSSSYENVRAKWYPEITHHCPNTPIILVGTKLD 181
AGQEDYDRLRPLSYPQTDVFLICFSL++ +SYENV A WYP++ HHCP+TPIIL+GTKLD
Sbjct: 59 AGQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVHANWYPKVRHHCPSTPIILLGTKLD 118
Query: 182 LRENLINGEAGRDRRNTPINYPQGLVLAKEIGAVKYLECSALTQKGLKSVFDEAIRAVLC 361
LR++ E ++++ PI YPQGL LAKEI +VKYLECSALTQ+GLK+VFDEAIRAVLC
Sbjct: 119 LRDDKETIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVFDEAIRAVLC 178
Query: 362 PKP--PRKKTCKFL 397
P+P P+K+ C L
Sbjct: 179 PQPTRPQKRACSLL 192
>sp|O95916|RAC4_HUMAN Putative Ras-related C3 botulinum toxin substrate 4 (p21-Rac4)
Length = 192
Score = 201 bits (510), Expect = 2e-51
Identities = 94/132 (71%), Positives = 113/132 (85%)
Frame = +2
Query: 2 AGQEDYDRLRPLSYPQTDVFLICFSLINSSSYENVRAKWYPEITHHCPNTPIILVGTKLD 181
AGQEDYDRLRPLSYPQ DVFLICFSL++ +S+ENV AKWYPE+ HHCPNTPIILVGTKLD
Sbjct: 59 AGQEDYDRLRPLSYPQADVFLICFSLVSPASFENVLAKWYPEVQHHCPNTPIILVGTKLD 118
Query: 182 LRENLINGEAGRDRRNTPINYPQGLVLAKEIGAVKYLECSALTQKGLKSVFDEAIRAVLC 361
LR++ + ++++ TPI YPQGL +AKE+GAVKYLEC ALT++GLK+VFDEAIRAVLC
Sbjct: 119 LRDDKDRIQKLKEKKLTPITYPQGLAMAKEMGAVKYLECLALTRRGLKTVFDEAIRAVLC 178
Query: 362 PKPPRKKTCKFL 397
P P +K+ K L
Sbjct: 179 PPPVKKRKRKCL 190
>sp|Q03206|RAC1_CAEEL RAS-related protein rac-1 (Cell-corpse engulfment protein ced-10)
(CErac1)
Length = 191
Score = 193 bits (491), Expect = 4e-49
Identities = 94/128 (73%), Positives = 107/128 (83%)
Frame = +2
Query: 2 AGQEDYDRLRPLSYPQTDVFLICFSLINSSSYENVRAKWYPEITHHCPNTPIILVGTKLD 181
AGQEDYDRLRPLSYPQTDVFL+CF+L N +S+ENVRAKWYPE++HHCPNTPIILVGTK D
Sbjct: 59 AGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVGTKAD 118
Query: 182 LRENLINGEAGRDRRNTPINYPQGLVLAKEIGAVKYLECSALTQKGLKSVFDEAIRAVLC 361
LRE+ E R+RR P++ QG V+AKEI AVKYLECSALTQ+GLK VFDEAIRAVL
Sbjct: 119 LREDRDTVERLRERRLQPVSQTQGYVMAKEIKAVKYLECSALTQRGLKQVFDEAIRAVLT 178
Query: 362 PKPPRKKT 385
P KK+
Sbjct: 179 PPQRAKKS 186
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,363,564
Number of Sequences: 369166
Number of extensions: 1638976
Number of successful extensions: 4023
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3884
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 6679696800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)