Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_007_J01
(854 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathe... 133 7e-31
sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted ... 130 4e-30
sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathe... 130 5e-30
sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) ... 125 1e-28
sp|Q24940|CATLP_FASHE Cathepsin L-like proteinase precursor 125 1e-28
sp|Q26636|CATL_SARPE Cathepsin L precursor [Contains: Cathe... 123 6e-28
sp|Q95029|CATL_DROME Cathepsin L precursor (Cysteine protei... 123 6e-28
sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Catheps... 123 7e-28
sp|Q10991|CATL_SHEEP Cathepsin L [Contains: Cathepsin L hea... 122 1e-27
sp||P09648_1 [Segment 1 of 2] Cathepsin L [Contains: Cathep... 122 1e-27
>sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 333
Score = 133 bits (334), Expect = 7e-31
Identities = 71/131 (54%), Positives = 83/131 (63%), Gaps = 5/131 (3%)
Frame = +1
Query: 1 EEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWSFSA 180
EEF+ G K +G + P +P SVDWR+KGYVTPVKNQ QCGSCW+FSA
Sbjct: 86 EEFRQVMNGFQNQKHK-KGKMFQEPL-FAEIPKSVDWREKGYVTPVKNQGQCGSCWAFSA 143
Query: 181 TGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQ-GIESEGDYP 357
TG+LEGQ FRK +L+S SEQ LVDCS LMDNAFRY+KD G++SE YP
Sbjct: 144 TGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNEGCNGGLMDNAFRYVKDNGGLDSEESYP 203
Query: 358 Y----TATVNY 378
Y T T NY
Sbjct: 204 YLGRDTETCNY 214
Score = 92.0 bits (227), Expect = 2e-18
Identities = 42/70 (60%), Positives = 49/70 (70%), Gaps = 3/70 (4%)
Frame = +3
Query: 585 IYNEESCSTTQLDHGVLAVGYG---TQIGKKYWIVKNSWDVTWGESGYIKMSKDKKNQCG 755
IY + CS+ LDHGVL VGYG T K+WIVKNSW WG +GY+KM+KD+ N CG
Sbjct: 264 IYFDPDCSSKDLDHGVLVVGYGFEGTDSNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCG 323
Query: 756 IATMASYPLV 785
IAT ASYP V
Sbjct: 324 IATAASYPTV 333
Score = 55.8 bits (133), Expect = 1e-07
Identities = 29/52 (55%), Positives = 32/52 (61%)
Frame = +2
Query: 428 TCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYK 583
TC P TGF D+ Q E L AVAT+GP+SVAIDAGH SFQ YK
Sbjct: 211 TCNYKPECSAANDTGFVDLP-QREKALMKAVATLGPISVAIDAGHQSFQFYK 261
>sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted protein) (MEP) [Contains:
Cathepsin L heavy chain; Cathepsin L light chain]
Length = 333
Score = 130 bits (328), Expect = 4e-30
Identities = 69/124 (55%), Positives = 80/124 (64%), Gaps = 1/124 (0%)
Frame = +1
Query: 1 EEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWSFSA 180
EEF+ G KP +G + P P SVDWR+KGYVTPVKNQ QCGSCW+FSA
Sbjct: 86 EEFRQVMNGFQNRKPR-KGKVFQEPLFYEA-PRSVDWREKGYVTPVKNQGQCGSCWAFSA 143
Query: 181 TGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQ-GIESEGDYP 357
TG+LEGQ FRK RLIS SEQ LVDCS LMD AF+Y++D G++SE YP
Sbjct: 144 TGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYP 203
Query: 358 YTAT 369
Y AT
Sbjct: 204 YEAT 207
Score = 90.5 bits (223), Expect = 5e-18
Identities = 40/71 (56%), Positives = 49/71 (69%), Gaps = 4/71 (5%)
Frame = +3
Query: 585 IYNEESCSTTQLDHGVLAVGYGTQI----GKKYWIVKNSWDVTWGESGYIKMSKDKKNQC 752
IY E CS+ +DHGVL VGYG + KYW+VKNSW WG GY+KM+KD++N C
Sbjct: 263 IYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHC 322
Query: 753 GIATMASYPLV 785
GIA+ ASYP V
Sbjct: 323 GIASAASYPTV 333
Score = 59.7 bits (143), Expect = 1e-08
Identities = 32/52 (61%), Positives = 34/52 (65%)
Frame = +2
Query: 428 TCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYK 583
+CK NP V TGF DI Q E L AVATVGP+SVAIDAGH SF YK
Sbjct: 210 SCKYNPKYSVANDTGFVDIPKQ-EKALMKAVATVGPISVAIDAGHESFLFYK 260
>sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 130 bits (327), Expect = 5e-30
Identities = 69/124 (55%), Positives = 81/124 (65%), Gaps = 1/124 (0%)
Frame = +1
Query: 1 EEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWSFSA 180
EEF+ G K +G + P + V P SVDW +KGYVTPVKNQ QCGSCW+FSA
Sbjct: 86 EEFRQVMNGFQNQKHK-KGKLFHEPLLVDV-PKSVDWTKKGYVTPVKNQGQCGSCWAFSA 143
Query: 181 TGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQ-GIESEGDYP 357
TG+LEGQ FRK +L+S SEQ LVDCS LMDNAF+YIKD G++SE YP
Sbjct: 144 TGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYIKDNGGLDSEESYP 203
Query: 358 YTAT 369
Y AT
Sbjct: 204 YLAT 207
Score = 89.0 bits (219), Expect = 2e-17
Identities = 41/71 (57%), Positives = 48/71 (67%), Gaps = 4/71 (5%)
Frame = +3
Query: 585 IYNEESCSTTQLDHGVLAVGYGTQ----IGKKYWIVKNSWDVTWGESGYIKMSKDKKNQC 752
IY + CS LDHGVL VGYG + K+WIVKNSW WG +GY+KM+KD+ N C
Sbjct: 264 IYYDPDCSCKDLDHGVLVVGYGFEGTDSNNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHC 323
Query: 753 GIATMASYPLV 785
GIAT ASYP V
Sbjct: 324 GIATAASYPTV 334
Score = 56.6 bits (135), Expect = 9e-08
Identities = 30/52 (57%), Positives = 32/52 (61%)
Frame = +2
Query: 428 TCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYK 583
+C P TGF DI Q E L AVATVGP+SVAIDAGH SFQ YK
Sbjct: 211 SCNYKPECSAANDTGFVDIP-QREKALMKAVATVGPISVAIDAGHTSFQFYK 261
>sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) (Cathepsin U)
Length = 334
Score = 125 bits (315), Expect = 1e-28
Identities = 63/123 (51%), Positives = 82/123 (66%), Gaps = 1/123 (0%)
Frame = +1
Query: 1 EEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWSFSA 180
EEF+ + +G + + +G + P + LP SVDWR+KGYVTPVKNQ+QCGSCW+FSA
Sbjct: 86 EEFR-QMMGCFRNQKFRKGKVFREPLFLD-LPKSVDWRKKGYVTPVKNQKQCGSCWAFSA 143
Query: 181 TGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQ-GIESEGDYP 357
TG+LEGQ FRK +L+S SEQ LVDCS M AF+Y+K+ G++SE YP
Sbjct: 144 TGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYP 203
Query: 358 YTA 366
Y A
Sbjct: 204 YVA 206
Score = 91.7 bits (226), Expect = 2e-18
Identities = 42/71 (59%), Positives = 49/71 (69%), Gaps = 4/71 (5%)
Frame = +3
Query: 585 IYNEESCSTTQLDHGVLAVGYGTQ----IGKKYWIVKNSWDVTWGESGYIKMSKDKKNQC 752
IY E CS+ LDHGVL VGYG + KYW+VKNSW WG +GY+K++KDK N C
Sbjct: 264 IYFEPDCSSKNLDHGVLVVGYGFEGANSNNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHC 323
Query: 753 GIATMASYPLV 785
GIAT ASYP V
Sbjct: 324 GIATAASYPNV 334
Score = 60.8 bits (146), Expect = 5e-09
Identities = 30/54 (55%), Positives = 34/54 (62%)
Frame = +2
Query: 422 DGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYK 583
D CK P V TGFT + E L AVATVGP+SVA+DAGH+SFQ YK
Sbjct: 208 DEICKYRPENSVANDTGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYK 261
>sp|Q24940|CATLP_FASHE Cathepsin L-like proteinase precursor
Length = 326
Score = 125 bits (314), Expect = 1e-28
Identities = 60/122 (49%), Positives = 75/122 (61%)
Frame = +1
Query: 1 EEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWSFSA 180
EEFKAKYL M + N +P +DWR+ GYVT VK+Q CGSCW+FS
Sbjct: 78 EEFKAKYLTEMSRASDILSHGVPYEANNRAVPDKIDWRESGYVTEVKDQGNCGSCWAFST 137
Query: 181 TGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQGIESEGDYPY 360
TG++EGQY + ISFSEQQLVDCS LM+NA++Y+K G+E+E YPY
Sbjct: 138 TGTMEGQYMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQYLKQFGLETESSYPY 197
Query: 361 TA 366
TA
Sbjct: 198 TA 199
Score = 93.6 bits (231), Expect = 6e-19
Identities = 39/67 (58%), Positives = 52/67 (77%)
Frame = +3
Query: 585 IYNEESCSTTQLDHGVLAVGYGTQIGKKYWIVKNSWDVTWGESGYIKMSKDKKNQCGIAT 764
IY ++CS +++H VLAVGYGTQ G YWIVKNSW WGE GYI+M++++ N CGIA+
Sbjct: 256 IYQSQTCSPLRVNHAVLAVGYGTQGGTDYWIVKNSWGTYWGERGYIRMARNRGNMCGIAS 315
Query: 765 MASYPLV 785
+AS P+V
Sbjct: 316 LASLPMV 322
Score = 37.4 bits (85), Expect = 0.054
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +2
Query: 422 DGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYK 583
+G C+ N V K TG+ + S +E +L N V P +VA+D + F +Y+
Sbjct: 201 EGQCRYNKQLGVAKVTGYYTVHSGSEVELKNLVGARRPAAVAVDV-ESDFMMYR 253
>sp|Q26636|CATL_SARPE Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 339
Score = 123 bits (309), Expect = 6e-28
Identities = 62/112 (55%), Positives = 78/112 (69%), Gaps = 1/112 (0%)
Frame = +1
Query: 28 IMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWSFSATGSLEGQYF 207
+M+ + L G+TY+ P ++ V P SVDWR+ G VT VK+Q CGSCW+FS+TG+LEGQ+F
Sbjct: 102 LMRERTGLVGATYIPPAHVTV-PKSVDWREHGAVTGVKDQGHCGSCWAFSSTGALEGQHF 160
Query: 208 RKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQ-GIESEGDYPY 360
RK L+S SEQ LVDCS LMDNAFRYIKD GI++E YPY
Sbjct: 161 RKAGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPY 212
Score = 99.8 bits (247), Expect = 9e-21
Identities = 43/68 (63%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Frame = +3
Query: 585 IYNEESCSTTQLDHGVLAVGYGT-QIGKKYWIVKNSWDVTWGESGYIKMSKDKKNQCGIA 761
+YNE C LDHGVL VGYGT + G YW+VKNSW TWGE GYIKM++++ NQCGIA
Sbjct: 272 VYNEPECDEQNLDHGVLVVGYGTDESGMDYWLVKNSWGTTWGEQGYIKMARNQNNQCGIA 331
Query: 762 TMASYPLV 785
T +SYP V
Sbjct: 332 TASSYPTV 339
Score = 57.0 bits (136), Expect = 7e-08
Identities = 29/53 (54%), Positives = 34/53 (64%)
Frame = +2
Query: 422 DGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLY 580
D +C N + I TGF DI +E + AVAT+GPVSVAIDA H SFQLY
Sbjct: 216 DDSCHFNKATIGATDTGFVDIPEGDEEKMKKAVATMGPVSVAIDASHESFQLY 268
>sp|Q95029|CATL_DROME Cathepsin L precursor (Cysteine proteinase 1) [Contains: Cathepsin
L heavy chain; Cathepsin L light chain]
Length = 341
Score = 123 bits (309), Expect = 6e-28
Identities = 61/108 (56%), Positives = 77/108 (71%), Gaps = 1/108 (0%)
Frame = +1
Query: 46 TLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWSFSATGSLEGQYFRKNNRL 225
+ +G T+++P ++ LP SVDWR KG VT VK+Q CGSCW+FS+TG+LEGQ+FRK+ L
Sbjct: 110 SFKGVTFISPAHV-TLPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVL 168
Query: 226 ISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQ-GIESEGDYPYTA 366
+S SEQ LVDCS LMDNAFRYIKD GI++E YPY A
Sbjct: 169 VSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEA 216
Score = 97.8 bits (242), Expect = 3e-20
Identities = 41/68 (60%), Positives = 53/68 (77%), Gaps = 1/68 (1%)
Frame = +3
Query: 585 IYNEESCSTTQLDHGVLAVGYGT-QIGKKYWIVKNSWDVTWGESGYIKMSKDKKNQCGIA 761
+YNE C LDHGVL VG+GT + G+ YW+VKNSW TWG+ G+IKM ++K+NQCGIA
Sbjct: 274 VYNEPQCDAQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFIKMLRNKENQCGIA 333
Query: 762 TMASYPLV 785
+ +SYPLV
Sbjct: 334 SASSYPLV 341
Score = 57.4 bits (137), Expect = 5e-08
Identities = 29/53 (54%), Positives = 33/53 (62%)
Frame = +2
Query: 422 DGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLY 580
D +C N + GFTDI +E +A AVATVGPVSVAIDA H SFQ Y
Sbjct: 218 DDSCHFNKGTVGATDRGFTDIPQGDEKKMAEAVATVGPVSVAIDASHESFQFY 270
>sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 123 bits (308), Expect = 7e-28
Identities = 57/91 (62%), Positives = 68/91 (74%), Gaps = 1/91 (1%)
Frame = +1
Query: 91 LPASVDWRQKGYVTPVKNQQQCGSCWSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXX 270
+P SVDWR+KGYVT VKNQ QCGSCW+FSATG+LEGQ FRK +L+S SEQ LVDCS
Sbjct: 114 VPKSVDWREKGYVTAVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQ 173
Query: 271 XXXXXXXXLMDNAFRYIKDQ-GIESEGDYPY 360
LMDNAF+Y+KD G+++E YPY
Sbjct: 174 GNQGCNGGLMDNAFQYVKDNGGLDTEESYPY 204
Score = 88.6 bits (218), Expect = 2e-17
Identities = 40/71 (56%), Positives = 49/71 (69%), Gaps = 4/71 (5%)
Frame = +3
Query: 585 IYNEESCSTTQLDHGVLAVGYGTQ----IGKKYWIVKNSWDVTWGESGYIKMSKDKKNQC 752
IY + CS+ LDHGVL VGYG + K+WIVKNSW WG +GY+KM+KD+ N C
Sbjct: 264 IYYDPDCSSKDLDHGVLVVGYGFEGTDSNSSKFWIVKNSWGPEWGWNGYVKMAKDQNNHC 323
Query: 753 GIATMASYPLV 785
GI+T ASYP V
Sbjct: 324 GISTAASYPTV 334
Score = 56.6 bits (135), Expect = 9e-08
Identities = 30/52 (57%), Positives = 33/52 (63%)
Frame = +2
Query: 428 TCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYK 583
+C P TGF DI Q E L AVATVGP+SVAIDAGH+SFQ YK
Sbjct: 211 SCTYKPECSAANDTGFVDIP-QREKALMKAVATVGPISVAIDAGHSSFQFYK 261
>sp|Q10991|CATL_SHEEP Cathepsin L [Contains: Cathepsin L heavy chain; Cathepsin L light
chain]
Length = 217
Score = 122 bits (307), Expect = 1e-27
Identities = 59/94 (62%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
Frame = +1
Query: 91 LPASVDWRQKGYVTPVKNQQQCGSCWSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXX 270
+P SVDW +KGYVTPVKNQ QCGSCW+FSATG+LEGQ FRK +L+S SEQ LVD S
Sbjct: 1 VPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDSSRPQ 60
Query: 271 XXXXXXXXLMDNAFRYIKDQ-GIESEGDYPYTAT 369
LMDNAF+YIK+ G++SE YPY AT
Sbjct: 61 GNQGCNGGLMDNAFQYIKENGGLDSEESYPYEAT 94
Score = 92.4 bits (228), Expect = 1e-18
Identities = 41/68 (60%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Frame = +3
Query: 585 IYNEESCSTTQLDHGVLAVGYGTQ-IGKKYWIVKNSWDVTWGESGYIKMSKDKKNQCGIA 761
IY + CS+ LDHGVL VGYG + K+WIVKNSW WG GY+KM+KD+ N CGIA
Sbjct: 150 IYYDPDCSSKDLDHGVLVVGYGFEGTNNKFWIVKNSWGPEWGNKGYVKMAKDQNNHCGIA 209
Query: 762 TMASYPLV 785
T ASYP V
Sbjct: 210 TAASYPTV 217
Score = 60.8 bits (146), Expect = 5e-09
Identities = 32/54 (59%), Positives = 35/54 (64%)
Frame = +2
Query: 422 DGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYK 583
D +C P K TGF DI Q E L AVATVGP+SVAIDAGH+SFQ YK
Sbjct: 95 DTSCNYKPEYSAAKDTGFVDIP-QREKALMKAVATVGPISVAIDAGHSSFQFYK 147
>sp||P09648_1 [Segment 1 of 2] Cathepsin L [Contains: Cathepsin L heavy chain;
Cathepsin L light chain]
Length = 176
Score = 122 bits (307), Expect = 1e-27
Identities = 57/92 (61%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Frame = +1
Query: 94 PASVDWRQKGYVTPVKNQQQCGSCWSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXX 273
P SVDWR+KGYVTPVK+Q QCGSCW+FS TG+LEGQ+FR +L+S SEQ LVDCS
Sbjct: 2 PRSVDWREKGYVTPVKDQGQCGSCWAFSTTGALEGQHFRTKGKLVSLSEQNLVDCSRPEG 61
Query: 274 XXXXXXXLMDNAFRYIKDQ-GIESEGDYPYTA 366
LMD AF+Y++D GI+SE YPYTA
Sbjct: 62 NQGCNGGLMDQAFQYVQDNGGIDSEESYPYTA 93
Score = 55.1 bits (131), Expect = 2e-07
Identities = 28/54 (51%), Positives = 33/54 (61%)
Frame = +2
Query: 422 DGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYK 583
D C+ TGF DI +E L AVA+VGPVSVAIDAGH+SFQ Y+
Sbjct: 96 DEDCRYKAEYNAANDTGFVDIPQGHERALMKAVASVGPVSVAIDAGHSSFQFYQ 149
Score = 35.8 bits (81), Expect = 0.16
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = +3
Query: 585 IYNEESCSTTQLDHGVLAVGYG 650
IY E CS+ LDHGVL VGYG
Sbjct: 152 IYYEPDCSSEDLDHGVLVVGYG 173
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,395,277
Number of Sequences: 369166
Number of extensions: 1825636
Number of successful extensions: 5138
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4964
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8438301375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)