Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_007_H13
(838 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q28259|G3P_CANFA Glyceraldehyde-3-phosphate dehydrogenas... 385 e-106
sp|Q9N2D5|G3P_FELCA Glyceraldehyde-3-phosphate dehydrogenas... 384 e-106
sp|P46406|G3P_RABIT Glyceraldehyde-3-phosphate dehydrogenas... 383 e-106
sp|P00355|G3P_PIG Glyceraldehyde-3-phosphate dehydrogenase ... 383 e-106
sp|Q28554|G3P_SHEEP Glyceraldehyde-3-phosphate dehydrogenas... 382 e-106
sp|P10096|G3P_BOVIN Glyceraldehyde-3-phosphate dehydrogenas... 378 e-105
sp|P51469|G3P_XENLA Glyceraldehyde-3-phosphate dehydrogenas... 377 e-104
sp|P00356|G3P_CHICK Glyceraldehyde-3-phosphate dehydrogenas... 375 e-104
sp|P16858|G3P_MOUSE Glyceraldehyde-3-phosphate dehydrogenas... 375 e-103
sp|Q05025|G3P_COTJA Glyceraldehyde-3-phosphate dehydrogenas... 374 e-103
>sp|Q28259|G3P_CANFA Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 385 bits (988), Expect = e-106
Identities = 188/265 (70%), Positives = 219/265 (82%)
Frame = +1
Query: 43 RLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKDGKLVVDGHAMS 222
RLV RAA G VD+VA+NDPFI+L+YMVYMF+YDSTHGKFHG V+A++GKLV++G ++S
Sbjct: 14 RLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGKSIS 73
Query: 223 VYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISAPSADAPMFVMG 402
++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISAPSADAPMFVMG
Sbjct: 74 IFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISAPSADAPMFVMG 132
Query: 403 VNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTATQKTVDGPSSK 582
VNHEKYD SL IVSNASCTTNCLAPLAKV++DHFGI EGLMTT+HA TATQKTVDGPS K
Sbjct: 133 VNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITATQKTVDGPSGK 192
Query: 583 LWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVVDLTCKLKKAAK 762
+WRDGRGAAQNIIP IPELNGK+TGMAFRVP P+VSVVDLTC+L+KAAK
Sbjct: 193 MWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKAAK 252
Query: 763 YDEIKAAIKHASETTMKGILAYTEE 837
YD+IK +K ASE +KGIL YTE+
Sbjct: 253 YDDIKKVVKQASEGPLKGILGYTED 277
>sp|Q9N2D5|G3P_FELCA Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 384 bits (985), Expect = e-106
Identities = 188/265 (70%), Positives = 218/265 (82%)
Frame = +1
Query: 43 RLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKDGKLVVDGHAMS 222
RLV RAA G VD+VA+NDPFI+L+YMVYMF+YDSTHGKFHG V+A++GKLV++G ++
Sbjct: 14 RLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGKPIT 73
Query: 223 VYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISAPSADAPMFVMG 402
++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISAPSADAPMFVMG
Sbjct: 74 IFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISAPSADAPMFVMG 132
Query: 403 VNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTATQKTVDGPSSK 582
VNHEKYD SL IVSNASCTTNCLAPLAKV++DHFGI EGLMTT+HA TATQKTVDGPS K
Sbjct: 133 VNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITATQKTVDGPSGK 192
Query: 583 LWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVVDLTCKLKKAAK 762
LWRDGRGAAQNIIP IPELNGK+TGMAFRVP P+VSVVDLTC+L+KAAK
Sbjct: 193 LWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKAAK 252
Query: 763 YDEIKAAIKHASETTMKGILAYTEE 837
YD+IK +K ASE +KGIL YTE+
Sbjct: 253 YDDIKKVVKQASEGPLKGILGYTED 277
>sp|P46406|G3P_RABIT Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 383 bits (984), Expect = e-106
Identities = 189/265 (71%), Positives = 217/265 (81%)
Frame = +1
Query: 43 RLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKDGKLVVDGHAMS 222
RLV RAA G VDVVA+NDPFI+L YMVYMF+YDSTHGKFHG V+A++GKLV++G A++
Sbjct: 14 RLVTRAAFNSGKVDVVAINDPFIDLHYMVYMFQYDSTHGKFHGTVKAENGKLVINGKAIT 73
Query: 223 VYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISAPSADAPMFVMG 402
++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISAPS DAPMFVMG
Sbjct: 74 IFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISAPSXDAPMFVMG 132
Query: 403 VNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTATQKTVDGPSSK 582
VNHEKYD SL IVSNASCTTNCLAPLAKV++DHFGI EGLMTT+HA TATQKTVDGPS K
Sbjct: 133 VNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITATQKTVDGPSGK 192
Query: 583 LWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVVDLTCKLKKAAK 762
LWRDGRGAAQNIIP IPELNGK+TGMAFRVP P+VSVVDLTC+L+KAAK
Sbjct: 193 LWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKAAK 252
Query: 763 YDEIKAAIKHASETTMKGILAYTEE 837
YD+IK +K ASE +KGIL YTE+
Sbjct: 253 YDDIKKVVKQASEGPLKGILGYTED 277
>sp|P00355|G3P_PIG Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 383 bits (983), Expect = e-106
Identities = 188/265 (70%), Positives = 217/265 (81%)
Frame = +1
Query: 43 RLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKDGKLVVDGHAMS 222
RLV RAA G VD+VA+NDPFI+L YMVYMF+YDSTHGKFHG V+A++GKLV++G A++
Sbjct: 14 RLVTRAAFNSGKVDIVAINDPFIDLHYMVYMFQYDSTHGKFHGTVKAENGKLVINGKAIT 73
Query: 223 VYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISAPSADAPMFVMG 402
++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISAPSADAPMFVMG
Sbjct: 74 IFQERDPANIKWGDAGATYVVESTGVFTTMEKAGAHLKGG-AKRVIISAPSADAPMFVMG 132
Query: 403 VNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTATQKTVDGPSSK 582
VNHEKYD SL IVSNASCTTNCLAPLAKV++DHFGI EGLMTT+HA TATQKTVDGPS K
Sbjct: 133 VNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITATQKTVDGPSGK 192
Query: 583 LWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVVDLTCKLKKAAK 762
LWRDGRGAAQNIIP IPELNGK+TGMAFRVP P+VSVVDLTC+L+K AK
Sbjct: 193 LWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKPAK 252
Query: 763 YDEIKAAIKHASETTMKGILAYTEE 837
YD+IK +K ASE +KGIL YTE+
Sbjct: 253 YDDIKKVVKQASEGPLKGILGYTED 277
>sp|Q28554|G3P_SHEEP Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 322
Score = 382 bits (980), Expect = e-106
Identities = 188/265 (70%), Positives = 217/265 (81%)
Frame = +1
Query: 43 RLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKDGKLVVDGHAMS 222
RLV RAA G VD+VA+NDPFI+L YMVYMF+YDSTHGKFHG V+A++GKLV++G A++
Sbjct: 3 RLVTRAAFNTGKVDIVAINDPFIDLHYMVYMFQYDSTHGKFHGTVKAENGKLVINGKAIT 62
Query: 223 VYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISAPSADAPMFVMG 402
++ +R+P I W YVVESTGVFTT+EKA AH K AKKV+ISAPSADAPMFVMG
Sbjct: 63 IFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGG-AKKVIISAPSADAPMFVMG 121
Query: 403 VNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTATQKTVDGPSSK 582
VNHEKY+ +L IVSNASCTTNCLAPLAKV++DHFGI EGLMTT+HA TATQKTVDGPS K
Sbjct: 122 VNHEKYNNTLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITATQKTVDGPSGK 181
Query: 583 LWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVVDLTCKLKKAAK 762
LWRDGRGAAQNIIP IPELNGK+TGMAFRVP P+VSVVDLTC+L+K AK
Sbjct: 182 LWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKPAK 241
Query: 763 YDEIKAAIKHASETTMKGILAYTEE 837
YDEIK +K ASE +KGIL YTE+
Sbjct: 242 YDEIKKVVKQASEGPLKGILGYTED 266
>sp|P10096|G3P_BOVIN Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 320
Score = 378 bits (971), Expect = e-105
Identities = 186/265 (70%), Positives = 217/265 (81%)
Frame = +1
Query: 43 RLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKDGKLVVDGHAMS 222
RLV RAA G VD+VA+NDPFI+L YMVYMF+YDSTHGKF+G V+A++GKLV++G A++
Sbjct: 13 RLVTRAAFNSGKVDIVAINDPFIDLHYMVYMFQYDSTHGKFNGTVKAENGKLVINGKAIT 72
Query: 223 VYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISAPSADAPMFVMG 402
++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISAPSADAPMFVMG
Sbjct: 73 IFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISAPSADAPMFVMG 131
Query: 403 VNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTATQKTVDGPSSK 582
VNHEKY+ +L IVSNASCTTNCLAPLAKV++DHFGI EGLMTT+HA TATQKTVDGPS K
Sbjct: 132 VNHEKYNNTLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITATQKTVDGPSGK 191
Query: 583 LWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVVDLTCKLKKAAK 762
LWRDGRGAAQNIIP IPELNGK+TGMAFRVP P+VSVVDLTC+L+K AK
Sbjct: 192 LWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKPAK 251
Query: 763 YDEIKAAIKHASETTMKGILAYTEE 837
YDEIK +K ASE +KGIL YTE+
Sbjct: 252 YDEIKKVVKQASEGPLKGILGYTED 276
>sp|P51469|G3P_XENLA Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 377 bits (969), Expect = e-104
Identities = 187/265 (70%), Positives = 216/265 (81%)
Frame = +1
Query: 43 RLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKDGKLVVDGHAMS 222
RLV RAA + G V VVA+NDPFI+LDYMVYMFKYDSTHG+F G V+A++GKL+++ ++
Sbjct: 14 RLVTRAAFDSGKVQVVAINDPFIDLDYMVYMFKYDSTHGRFKGTVKAENGKLIINDQVIT 73
Query: 223 VYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISAPSADAPMFVMG 402
V+ +R+P I W YVVESTGVFTT EKAS H K AK+VVISAPSADAPMFV+G
Sbjct: 74 VFQERDPSSIKWGDAGAVYVVESTGVFTTTEKASLHLKGG-AKRVVISAPSADAPMFVVG 132
Query: 403 VNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTATQKTVDGPSSK 582
VNHEKY+ SL +VSNASCTTNCLAPLAKV+ND+FGI EGLMTT+HA+TATQKTVDGPS K
Sbjct: 133 VNHEKYENSLKVVSNASCTTNCLAPLAKVINDNFGIVEGLMTTVHAFTATQKTVDGPSGK 192
Query: 583 LWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVVDLTCKLKKAAK 762
LWRDGRGA QNIIP IPELNGKITGMAFRVP P+VSVVDLTC+L+K AK
Sbjct: 193 LWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKITGMAFRVPTPNVSVVDLTCRLQKPAK 252
Query: 763 YDEIKAAIKHASETTMKGILAYTEE 837
YD+IKAAIK ASE MKGIL YT++
Sbjct: 253 YDDIKAAIKTASEGPMKGILGYTQD 277
>sp|P00356|G3P_CHICK Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 375 bits (963), Expect = e-104
Identities = 185/265 (69%), Positives = 217/265 (81%)
Frame = +1
Query: 43 RLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKDGKLVVDGHAMS 222
RLV RAA+ G V VVA+NDPFI+L+YMVYMFKYDSTHG F G V+A++GKLV++GHA++
Sbjct: 14 RLVTRAAVLSGKVQVVAINDPFIDLNYMVYMFKYDSTHGHFKGTVKAENGKLVINGHAIT 73
Query: 223 VYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISAPSADAPMFVMG 402
++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISAPSADAPMFVMG
Sbjct: 74 IFQERDPSNIKWADAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISAPSADAPMFVMG 132
Query: 403 VNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTATQKTVDGPSSK 582
VNHEKYD SL IVSNASCTTNCLAPLAKV++D+FGI EGLMTT+HA TATQKTVDGPS K
Sbjct: 133 VNHEKYDKSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGK 192
Query: 583 LWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVVDLTCKLKKAAK 762
LWRDGRGAAQNIIP IPELNGK+TGMAFRVP P+VSVVDLTC+L+K AK
Sbjct: 193 LWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKPAK 252
Query: 763 YDEIKAAIKHASETTMKGILAYTEE 837
YD+IK +K A++ +KGIL YTE+
Sbjct: 253 YDDIKRVVKAAADGPLKGILGYTED 277
>sp|P16858|G3P_MOUSE Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 375 bits (962), Expect = e-103
Identities = 184/265 (69%), Positives = 218/265 (82%)
Frame = +1
Query: 43 RLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKDGKLVVDGHAMS 222
RLV RAA+ G V++VA+NDPFI+L+YMVYMF+YDSTHGKF+G V+A++GKLV++G ++
Sbjct: 14 RLVTRAAICSGKVEIVAINDPFIDLNYMVYMFQYDSTHGKFNGTVKAENGKLVINGKPIT 73
Query: 223 VYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISAPSADAPMFVMG 402
++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISAPSADAPMFVMG
Sbjct: 74 IFQERDPTNIKWGEAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISAPSADAPMFVMG 132
Query: 403 VNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTATQKTVDGPSSK 582
VNHEKYD SL IVSNASCTTNCLAPLAKV++D+FGI EGLMTT+HA TATQKTVDGPS K
Sbjct: 133 VNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGK 192
Query: 583 LWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVVDLTCKLKKAAK 762
LWRDGRGAAQNIIP IPELNGK+TGMAFRVP P+VSVVDLTC+L+K AK
Sbjct: 193 LWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKPAK 252
Query: 763 YDEIKAAIKHASETTMKGILAYTEE 837
YD+IK +K ASE +KGIL YTE+
Sbjct: 253 YDDIKKVVKQASEGPLKGILGYTED 277
>sp|Q05025|G3P_COTJA Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 374 bits (960), Expect = e-103
Identities = 185/265 (69%), Positives = 217/265 (81%)
Frame = +1
Query: 43 RLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKDGKLVVDGHAMS 222
RLV RAA+ G V VVA+NDPFI+L+YMVYMFKYDSTHG F G V+A++GKLV++G+A++
Sbjct: 14 RLVTRAAVLSGKVQVVAINDPFIDLNYMVYMFKYDSTHGHFKGTVKAENGKLVINGNAIT 73
Query: 223 VYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISAPSADAPMFVMG 402
++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISAPSADAPMFVMG
Sbjct: 74 IFQERDPSNIKWGDAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISAPSADAPMFVMG 132
Query: 403 VNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTATQKTVDGPSSK 582
VNHEKYD SL IVSNASCTTNCLAPLAKV++D+FGI EGLMTT+HA TATQKTVDGPS K
Sbjct: 133 VNHEKYDKSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGK 192
Query: 583 LWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVVDLTCKLKKAAK 762
LWRDGRGAAQNIIP IPELNGK+TGMAFRVP P+VSVVDLTC+L+K AK
Sbjct: 193 LWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKPAK 252
Query: 763 YDEIKAAIKHASETTMKGILAYTEE 837
YD+IK +K A+E +KGIL YTE+
Sbjct: 253 YDDIKRVVKAAAEGPLKGILGYTED 277
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.315 0.131 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,862,414
Number of Sequences: 369166
Number of extensions: 2018715
Number of successful extensions: 5819
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5419
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8148988185
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)