Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_007_H07
(893 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P07154|CATL_RAT Cathepsin L precursor (Major excreted pr... 303 3e-82
sp|P06797|CATL_MOUSE Cathepsin L precursor (Major excreted ... 301 1e-81
sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) ... 300 4e-81
sp|P43236|CATK_RABIT Cathepsin K precursor (OC-2 protein) 293 4e-79
sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathe... 292 8e-79
sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted ... 291 1e-78
sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathe... 291 2e-78
sp|P43235|CATK_HUMAN Cathepsin K precursor (Cathepsin O) (C... 290 4e-78
sp|P61277|CATK_MACMU Cathepsin K precursor >gi|47117667|sp|... 290 4e-78
sp|Q26636|CATL_SARPE Cathepsin L precursor [Contains: Cathe... 289 6e-78
>sp|P07154|CATL_RAT Cathepsin L precursor (Major excreted protein) (MEP) (Cyclic
protein 2) (CP-2) [Contains: Cathepsin L heavy chain;
Cathepsin L light chain]
Length = 334
Score = 303 bits (777), Expect = 3e-82
Identities = 161/302 (53%), Positives = 205/302 (67%), Gaps = 5/302 (1%)
Frame = +2
Query: 2 TSVLLLFTILLRSSAFKFQINEELNDEWNLYKTRYQKSYLSIVELTRRIIWEENLRYIQH 181
T +LLL + L ++ + ++ N +W+ +K+ +++ Y + E RR +WE+N+R IQ
Sbjct: 2 TPLLLLAVLCLGTALATPKFDQTFNAQWHQWKSTHRRLYGTNEEEWRRAVWEKNMRMIQL 61
Query: 182 HNLEYDLGKHSYYLGVNEYADLTHEEFKIKFLGLKPINRNYSRTIFMPPENMDNYPKSVD 361
HN EY GKH + + +N + D+T+EEF+ G + R +F P M PK+VD
Sbjct: 62 HNGEYSNGKHGFTMEMNAFGDMTNEEFRQIVNGYRHQKHKKGR-LFQEPL-MLQIPKTVD 119
Query: 362 WRKKGYVTPVKNQGQCGSCWSFSTTGALEGQHFRKRKQLVSLSEQQLVDCSKDYQNNGCN 541
WR+KG VTPVKNQGQCGSCW+FS +G LEGQ F K +L+SLSEQ LVDCS D N GCN
Sbjct: 120 WREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCN 179
Query: 542 GGLMDNAFQYIQKY-GLESEADYPYTAMDGPCKYDSTKVVAHCTGFVDIKKGNEKDLTKA 718
GGLMD AFQYI++ GL+SE YPY A DG CKY + VA+ TGFVDI + EK L KA
Sbjct: 180 GGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEYAVANDTGFVDIPQ-QEKALMKA 238
Query: 719 VATVGPISVAIDASRPSFQLYKGGIYNEVNCSSNNLDHGVLAVGYGAEG----KNHFWIV 886
VATVGPISVA+DAS PS Q Y GIY E NCSS +LDHGVL VGYG EG K+ +W+V
Sbjct: 239 VATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKDLDHGVLVVGYGYEGTDSNKDKYWLV 298
Query: 887 KN 892
KN
Sbjct: 299 KN 300
>sp|P06797|CATL_MOUSE Cathepsin L precursor (Major excreted protein) (MEP) (p39 cysteine
proteinase) [Contains: Cathepsin L heavy chain;
Cathepsin L light chain]
Length = 334
Score = 301 bits (772), Expect = 1e-81
Identities = 162/300 (54%), Positives = 203/300 (67%), Gaps = 5/300 (1%)
Frame = +2
Query: 8 VLLLFTILLRSSAFKFQINEELNDEWNLYKTRYQKSYLSIVELTRRIIWEENLRYIQHHN 187
+LLL + L ++ + ++ + EW+ +K+ +++ Y + E RR IWE+N+R IQ HN
Sbjct: 4 LLLLAVLCLGTALATPKFDQTFSAEWHQWKSTHRRLYGTNEEEWRRAIWEKNMRMIQLHN 63
Query: 188 LEYDLGKHSYYLGVNEYADLTHEEFKIKFLGLKPINRNYSRTIFMPPENMDNYPKSVDWR 367
EY G+H + + +N + D+T+EEF+ G + R +F P M PKSVDWR
Sbjct: 64 GEYSNGQHGFSMEMNAFGDMTNEEFRQVVNGYRHQKHKKGR-LFQEPL-MLKIPKSVDWR 121
Query: 368 KKGYVTPVKNQGQCGSCWSFSTTGALEGQHFRKRKQLVSLSEQQLVDCSKDYQNNGCNGG 547
+KG VTPVKNQGQCGSCW+FS +G LEGQ F K +L+SLSEQ LVDCS N GCNGG
Sbjct: 122 EKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGG 181
Query: 548 LMDNAFQYIQKY-GLESEADYPYTAMDGPCKYDSTKVVAHCTGFVDIKKGNEKDLTKAVA 724
LMD AFQYI++ GL+SE YPY A DG CKY + VA+ TGFVDI + EK L KAVA
Sbjct: 182 LMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEFAVANDTGFVDIPQ-QEKALMKAVA 240
Query: 725 TVGPISVAIDASRPSFQLYKGGIYNEVNCSSNNLDHGVLAVGYGAEG----KNHFWIVKN 892
TVGPISVA+DAS PS Q Y GIY E NCSS NLDHGVL VGYG EG KN +W+VKN
Sbjct: 241 TVGPISVAMDASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNKYWLVKN 300
>sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) (Cathepsin U)
Length = 334
Score = 300 bits (768), Expect = 4e-81
Identities = 159/300 (53%), Positives = 200/300 (66%), Gaps = 5/300 (1%)
Frame = +2
Query: 8 VLLLFTILLRSSAFKFQINEELNDEWNLYKTRYQKSYLSIVELTRRIIWEENLRYIQHHN 187
VL F + + S+ KF N L+ +W +K +++ Y + E RR +WE+N++ I+ HN
Sbjct: 6 VLAAFCLGIASAVPKFDQN--LDTKWYQWKATHRRLYGANEEGWRRAVWEKNMKMIELHN 63
Query: 188 LEYDLGKHSYYLGVNEYADLTHEEFKIKFLGLKPINRNYSRTIFMPPENMDNYPKSVDWR 367
EY GKH + + +N + D+T+EEF+ + +G + +F P +D PKSVDWR
Sbjct: 64 GEYSQGKHGFTMAMNAFGDMTNEEFR-QMMGCFRNQKFRKGKVFREPLFLD-LPKSVDWR 121
Query: 368 KKGYVTPVKNQGQCGSCWSFSTTGALEGQHFRKRKQLVSLSEQQLVDCSKDYQNNGCNGG 547
KKGYVTPVKNQ QCGSCW+FS TGALEGQ FRK +LVSLSEQ LVDCS+ N GCNGG
Sbjct: 122 KKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGG 181
Query: 548 LMDNAFQYIQKY-GLESEADYPYTAMDGPCKYDSTKVVAHCTGFVDIKKGNEKDLTKAVA 724
M AFQY+++ GL+SE YPY A+D CKY VA+ TGF + G EK L KAVA
Sbjct: 182 FMARAFQYVKENGGLDSEESYPYVAVDEICKYRPENSVANDTGFTVVAPGKEKALMKAVA 241
Query: 725 TVGPISVAIDASRPSFQLYKGGIYNEVNCSSNNLDHGVLAVGYGAEGKN----HFWIVKN 892
TVGPISVA+DA SFQ YK GIY E +CSS NLDHGVL VGYG EG N +W+VKN
Sbjct: 242 TVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEGANSNNSKYWLVKN 301
>sp|P43236|CATK_RABIT Cathepsin K precursor (OC-2 protein)
Length = 329
Score = 293 bits (750), Expect = 4e-79
Identities = 152/295 (51%), Positives = 196/295 (66%), Gaps = 3/295 (1%)
Frame = +2
Query: 17 LFTILLRSSAFKFQINEELNDEWNLYKTRYQKSYLSIV-ELTRRIIWEENLRYIQHHNLE 193
L +LL +F E L+ +W L+K Y K Y S V E++RR+IWE+NL++I HNLE
Sbjct: 4 LKVLLLPVVSFALHPEEILDTQWELWKKTYSKQYNSKVDEISRRLIWEKNLKHISIHNLE 63
Query: 194 YDLGKHSYYLGVNEYADLTHEEFKIKFLGLK-PINRNYSRTIFMPPENMDNYPKSVDWRK 370
LG H+Y L +N D+T EE K GLK P +R++S P+ P S+D+RK
Sbjct: 64 ASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSRSHSNDTLYIPDWEGRTPDSIDYRK 123
Query: 371 KGYVTPVKNQGQCGSCWSFSTTGALEGQHFRKRKQLVSLSEQQLVDCSKDYQNNGCNGGL 550
KGYVTPVKNQGQCGSCW+FS+ GALEGQ +K +L++LS Q LVDC + N GC GG
Sbjct: 124 KGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NYGCGGGY 181
Query: 551 MDNAFQYIQKY-GLESEADYPYTAMDGPCKYDSTKVVAHCTGFVDIKKGNEKDLTKAVAT 727
M NAFQY+Q+ G++SE YPY D C Y+ T A C G+ +I +GNEK L +AVA
Sbjct: 182 MTNAFQYVQRNRGIDSEDAYPYVGQDESCMYNPTGKAAKCRGYREIPEGNEKALKRAVAR 241
Query: 728 VGPISVAIDASRPSFQLYKGGIYNEVNCSSNNLDHGVLAVGYGAEGKNHFWIVKN 892
VGP+SVAIDAS SFQ Y G+Y + NCSS+N++H VLAVGYG + N WI+KN
Sbjct: 242 VGPVSVAIDASLTSFQFYSKGVYYDENCSSDNVNHAVLAVGYGIQKGNKHWIIKN 296
>sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 333
Score = 292 bits (748), Expect = 8e-79
Identities = 155/292 (53%), Positives = 195/292 (66%), Gaps = 5/292 (1%)
Frame = +2
Query: 32 LRSSAFKFQINEELNDEWNLYKTRYQKSYLSIVELTRRIIWEENLRYIQHHNLEYDLGKH 211
+ S+A KF ++ LN +W +K +++ Y E RR +WE+N++ I+ HN EY GKH
Sbjct: 14 IASAAPKF--DQSLNAQWYQWKATHRRLYGMNEEGWRRAVWEKNMKMIELHNREYSQGKH 71
Query: 212 SYYLGVNEYADLTHEEFKIKFLGLKPINRNYSRTIFMPPENMDNYPKSVDWRKKGYVTPV 391
+ + +N + D+T+EEF+ G + N+ + + PKSVDWR+KGYVTPV
Sbjct: 72 GFTMAMNAFGDMTNEEFRQVMNGFQ--NQKHKKGKMFQEPLFAEIPKSVDWREKGYVTPV 129
Query: 392 KNQGQCGSCWSFSTTGALEGQHFRKRKQLVSLSEQQLVDCSKDYQNNGCNGGLMDNAFQY 571
KNQGQCGSCW+FS TGALEGQ FRK +LVSLSEQ LVDCS+ N GCNGGLMDNAF+Y
Sbjct: 130 KNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNEGCNGGLMDNAFRY 189
Query: 572 IQ-KYGLESEADYPYTAMD-GPCKYDSTKVVAHCTGFVDIKKGNEKDLTKAVATVGPISV 745
++ GL+SE YPY D C Y A+ TGFVD+ + EK L KAVAT+GPISV
Sbjct: 190 VKDNGGLDSEESYPYLGRDTETCNYKPECSAANDTGFVDLPQ-REKALMKAVATLGPISV 248
Query: 746 AIDASRPSFQLYKGGIYNEVNCSSNNLDHGVLAVGYGAEG---KNHFWIVKN 892
AIDA SFQ YK GIY + +CSS +LDHGVL VGYG EG N FWIVKN
Sbjct: 249 AIDAGHQSFQFYKSGIYFDPDCSSKDLDHGVLVVGYGFEGTDSNNKFWIVKN 300
>sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted protein) (MEP) [Contains:
Cathepsin L heavy chain; Cathepsin L light chain]
Length = 333
Score = 291 bits (746), Expect = 1e-78
Identities = 157/302 (51%), Positives = 194/302 (64%), Gaps = 5/302 (1%)
Frame = +2
Query: 2 TSVLLLFTILLRSSAFKFQINEELNDEWNLYKTRYQKSYLSIVELTRRIIWEENLRYIQH 181
T +L F + + S+ F + L +W +K + + Y E RR +WE+N++ I+
Sbjct: 4 TLILAAFCLGIASATLTF--DHSLEAQWTKWKAMHNRLYGMNEEGWRRAVWEKNMKMIEL 61
Query: 182 HNLEYDLGKHSYYLGVNEYADLTHEEFKIKFLGLKPINRNYSRTIFMPPENMDNYPKSVD 361
HN EY GKHS+ + +N + D+T EEF+ G + NR + P+SVD
Sbjct: 62 HNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQ--NRKPRKGKVFQEPLFYEAPRSVD 119
Query: 362 WRKKGYVTPVKNQGQCGSCWSFSTTGALEGQHFRKRKQLVSLSEQQLVDCSKDYQNNGCN 541
WR+KGYVTPVKNQGQCGSCW+FS TGALEGQ FRK +L+SLSEQ LVDCS N GCN
Sbjct: 120 WREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCN 179
Query: 542 GGLMDNAFQYIQ-KYGLESEADYPYTAMDGPCKYDSTKVVAHCTGFVDIKKGNEKDLTKA 718
GGLMD AFQY+Q GL+SE YPY A + CKY+ VA+ TGFVDI K EK L KA
Sbjct: 180 GGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPK-QEKALMKA 238
Query: 719 VATVGPISVAIDASRPSFQLYKGGIYNEVNCSSNNLDHGVLAVGYGAEG----KNHFWIV 886
VATVGPISVAIDA SF YK GIY E +CSS ++DHGVL VGYG E N +W+V
Sbjct: 239 VATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLV 298
Query: 887 KN 892
KN
Sbjct: 299 KN 300
>sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 291 bits (745), Expect = 2e-78
Identities = 154/285 (54%), Positives = 190/285 (66%), Gaps = 6/285 (2%)
Frame = +2
Query: 56 QINEELNDEWNLYKTRYQKSYLSIVELTRRIIWEENLRYIQHHNLEYDLGKHSYYLGVNE 235
+++ L+ W+ +K +++ Y E RR +WE+N + I HN EY GKH++ + +N
Sbjct: 20 KLDPNLDAHWHQWKATHRRLYGMNEEEWRRAVWEKNKKIIDLHNQEYSEGKHAFRMAMNA 79
Query: 236 YADLTHEEFKIKFLGLKPINRNYSRTIFMPPENMDNYPKSVDWRKKGYVTPVKNQGQCGS 415
+ D+T+EEF+ G + N+ + + + + PKSVDW KKGYVTPVKNQGQCGS
Sbjct: 80 FGDMTNEEFRQVMNGFQ--NQKHKKGKLFHEPLLVDVPKSVDWTKKGYVTPVKNQGQCGS 137
Query: 416 CWSFSTTGALEGQHFRKRKQLVSLSEQQLVDCSKDYQNNGCNGGLMDNAFQYIQ-KYGLE 592
CW+FS TGALEGQ FRK +LVSLSEQ LVDCS+ N GCNGGLMDNAFQYI+ GL+
Sbjct: 138 CWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYIKDNGGLD 197
Query: 593 SEADYPYTAMD-GPCKYDSTKVVAHCTGFVDIKKGNEKDLTKAVATVGPISVAIDASRPS 769
SE YPY A D C Y A+ TGFVDI + EK L KAVATVGPISVAIDA S
Sbjct: 198 SEESYPYLATDTNSCNYKPECSAANDTGFVDIPQ-REKALMKAVATVGPISVAIDAGHTS 256
Query: 770 FQLYKGGIYNEVNCSSNNLDHGVLAVGYGAEG----KNHFWIVKN 892
FQ YK GIY + +CS +LDHGVL VGYG EG N FWIVKN
Sbjct: 257 FQFYKSGIYYDPDCSCKDLDHGVLVVGYGFEGTDSNNNKFWIVKN 301
>sp|P43235|CATK_HUMAN Cathepsin K precursor (Cathepsin O) (Cathepsin X) (Cathepsin O2)
Length = 329
Score = 290 bits (742), Expect = 4e-78
Identities = 151/295 (51%), Positives = 196/295 (66%), Gaps = 3/295 (1%)
Frame = +2
Query: 17 LFTILLRSSAFKFQINEELNDEWNLYKTRYQKSYLSIV-ELTRRIIWEENLRYIQHHNLE 193
L +LL +F E L+ W L+K ++K Y + V E++RR+IWE+NL+YI HNLE
Sbjct: 4 LKVLLLPVVSFALYPEEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLE 63
Query: 194 YDLGKHSYYLGVNEYADLTHEEFKIKFLGLK-PINRNYSRTIFMPPENMDNYPKSVDWRK 370
LG H+Y L +N D+T EE K GLK P++ + S PE P SVD+RK
Sbjct: 64 ASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLSHSRSNDTLYIPEWEGRAPDSVDYRK 123
Query: 371 KGYVTPVKNQGQCGSCWSFSTTGALEGQHFRKRKQLVSLSEQQLVDCSKDYQNNGCNGGL 550
KGYVTPVKNQGQCGSCW+FS+ GALEGQ +K +L++LS Q LVDC + N+GC GG
Sbjct: 124 KGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDGCGGGY 181
Query: 551 MDNAFQYIQKY-GLESEADYPYTAMDGPCKYDSTKVVAHCTGFVDIKKGNEKDLTKAVAT 727
M NAFQY+QK G++SE YPY + C Y+ T A C G+ +I +GNEK L +AVA
Sbjct: 182 MTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVAR 241
Query: 728 VGPISVAIDASRPSFQLYKGGIYNEVNCSSNNLDHGVLAVGYGAEGKNHFWIVKN 892
VGP+SVAIDAS SFQ Y G+Y + +C+S+NL+H VLAVGYG + N WI+KN
Sbjct: 242 VGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKN 296
>sp|P61277|CATK_MACMU Cathepsin K precursor
sp|P61276|CATK_MACFA Cathepsin K precursor
Length = 329
Score = 290 bits (742), Expect = 4e-78
Identities = 151/295 (51%), Positives = 196/295 (66%), Gaps = 3/295 (1%)
Frame = +2
Query: 17 LFTILLRSSAFKFQINEELNDEWNLYKTRYQKSYLSIV-ELTRRIIWEENLRYIQHHNLE 193
L +LL +F E L+ W L+K ++K Y S V E++RR+IWE+NL+YI HNLE
Sbjct: 4 LKVLLLPVMSFALYPEEILDTHWELWKKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLE 63
Query: 194 YDLGKHSYYLGVNEYADLTHEEFKIKFLGLK-PINRNYSRTIFMPPENMDNYPKSVDWRK 370
LG H+Y L +N D+T+EE K GLK P + + S P+ P SVD+RK
Sbjct: 64 ASLGVHTYELAMNHLGDMTNEEVVQKMTGLKVPASHSRSNDTLYIPDWEGRAPDSVDYRK 123
Query: 371 KGYVTPVKNQGQCGSCWSFSTTGALEGQHFRKRKQLVSLSEQQLVDCSKDYQNNGCNGGL 550
KGYVTPVKNQGQCGSCW+FS+ GALEGQ +K +L++LS Q LVDC + N+GC GG
Sbjct: 124 KGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDGCGGGY 181
Query: 551 MDNAFQYIQKY-GLESEADYPYTAMDGPCKYDSTKVVAHCTGFVDIKKGNEKDLTKAVAT 727
M NAFQY+QK G++SE YPY + C Y+ T A C G+ +I +GNEK L +AVA
Sbjct: 182 MTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVAR 241
Query: 728 VGPISVAIDASRPSFQLYKGGIYNEVNCSSNNLDHGVLAVGYGAEGKNHFWIVKN 892
VGP+SVAIDAS SFQ Y G+Y + +C+S+NL+H VLAVGYG + N WI+KN
Sbjct: 242 VGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKN 296
>sp|Q26636|CATL_SARPE Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 339
Score = 289 bits (740), Expect = 6e-78
Identities = 150/284 (52%), Positives = 190/284 (66%), Gaps = 10/284 (3%)
Frame = +2
Query: 71 LNDEWNLYKTRYQKSYLSIVELTRRI-IWEENLRYIQHHNLEYDLGKHSYYLGVNEYADL 247
+ +EW+ YK +++K+Y + VE R+ I+ EN I HN + GK SY LG+N+YAD+
Sbjct: 24 IKEEWHTYKLQHRKNYANEVEERFRMKIFNENRHKIAKHNQLFAQGKVSYKLGLNKYADM 83
Query: 248 THEEFKIKFLGLKPINRNYSR-------TIFMPPENMDNYPKSVDWRKKGYVTPVKNQGQ 406
H EFK G R R ++PP ++ PKSVDWR+ G VT VK+QG
Sbjct: 84 LHHEFKETMNGYNHTLRQLMRERTGLVGATYIPPAHV-TVPKSVDWREHGAVTGVKDQGH 142
Query: 407 CGSCWSFSTTGALEGQHFRKRKQLVSLSEQQLVDCSKDYQNNGCNGGLMDNAFQYIQ-KY 583
CGSCW+FS+TGALEGQHFRK LVSLSEQ LVDCS Y NNGCNGGLMDNAF+YI+
Sbjct: 143 CGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNG 202
Query: 584 GLESEADYPYTAMDGPCKYDSTKVVAHCTGFVDIKKGNEKDLTKAVATVGPISVAIDASR 763
G+++E YPY +D C ++ + A TGFVDI +G+E+ + KAVAT+GP+SVAIDAS
Sbjct: 203 GIDTEKSYPYEGIDDSCHFNKATIGATDTGFVDIPEGDEEKMKKAVATMGPVSVAIDASH 262
Query: 764 PSFQLYKGGIYNEVNCSSNNLDHGVLAVGYGA-EGKNHFWIVKN 892
SFQLY G+YNE C NLDHGVL VGYG E +W+VKN
Sbjct: 263 ESFQLYSEGVYNEPECDEQNLDHGVLVVGYGTDESGMDYWLVKN 306
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,571,263
Number of Sequences: 369166
Number of extensions: 2084893
Number of successful extensions: 6366
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5796
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8982382310
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)