Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_007_G19
(924 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P00919|CAH2_RABIT Carbonic anhydrase 2 (Carbonic anhydra... 65 4e-10
sp|Q9D6N1|CAH13_MOUSE Carbonic anhydrase 13 (Carbonic anhyd... 60 9e-09
sp|P00918|CAH2_HUMAN Carbonic anhydrase II (Carbonate dehyd... 59 1e-08
sp|Q8UWA5|CAH2_TRIHK Carbonic anhydrase 2 (Carbonic anhydra... 59 3e-08
sp|P27139|CAH2_RAT Carbonic anhydrase II (Carbonate dehydra... 58 3e-08
sp|P43166|CAH7_HUMAN Carbonic anhydrase VII (Carbonate dehy... 58 4e-08
sp|Q92051|CAHZ_BRARE Carbonic anhydrase (Carbonate dehydrat... 58 4e-08
sp|Q9ERQ8|CAH7_MOUSE Carbonic anhydrase 7 (Carbonic anhydra... 57 6e-08
sp|P00920|CAH2_MOUSE Carbonic anhydrase 2 (Carbonic anhydra... 57 7e-08
sp|Q8N1Q1|CAH13_HUMAN Carbonic anhydrase XIII (Carbonate de... 56 1e-07
>sp|P00919|CAH2_RABIT Carbonic anhydrase 2 (Carbonic anhydrase II) (Carbonate dehydratase
II) (CA-II)
Length = 259
Score = 64.7 bits (156), Expect = 4e-10
Identities = 30/74 (40%), Positives = 45/74 (60%)
Frame = +1
Query: 646 WGYGADDGPHTWHASFPSAGGCRQSPINIELDKLKYDITLNIRPLTVAFEPERQLSQTLV 825
WGYG +GP WH FP A G RQSPI+I+ + K+D +L +PL V + E +S+ ++
Sbjct: 4 WGYGKHNGPEHWHKDFPIANGERQSPIDIDTNAAKHDPSL--KPLRVCY--EHPISRRII 59
Query: 826 YTGHNFRIDVAGDH 867
GH+F ++ H
Sbjct: 60 NNGHSFNVEFDDSH 73
>sp|Q9D6N1|CAH13_MOUSE Carbonic anhydrase 13 (Carbonic anhydrase XIII) (Carbonate
dehydratase XIII) (CA-XIII)
Length = 262
Score = 60.1 bits (144), Expect = 9e-09
Identities = 31/74 (41%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Frame = +1
Query: 637 MAR--WGYGADDGPHTWHASFPSAGGCRQSPINIELDKLKYDITLNIRPLTVAFEPERQL 810
MAR WGYG +GP W+ FP A G +QSPI I+ ++KYD +L RPL++ ++P
Sbjct: 1 MARLSWGYGEHNGPIHWNELFPIADGDQQSPIEIKTKEVKYDSSL--RPLSIKYDPAS-- 56
Query: 811 SQTLVYTGHNFRID 852
++ + +GH+F +D
Sbjct: 57 AKIISNSGHSFNVD 70
>sp|P00918|CAH2_HUMAN Carbonic anhydrase II (Carbonate dehydratase II) (CA-II) (Carbonic
anhydrase C)
Length = 260
Score = 59.3 bits (142), Expect = 1e-08
Identities = 28/69 (40%), Positives = 43/69 (62%)
Frame = +1
Query: 646 WGYGADDGPHTWHASFPSAGGCRQSPINIELDKLKYDITLNIRPLTVAFEPERQLSQTLV 825
WGYG +GP WH FP A G RQSP++I+ KYD +L +PL+V++ ++ S ++
Sbjct: 5 WGYGKHNGPEHWHKDFPIAKGERQSPVDIDTHTAKYDPSL--KPLSVSY--DQATSLRIL 60
Query: 826 YTGHNFRID 852
GH F ++
Sbjct: 61 NNGHAFNVE 69
>sp|Q8UWA5|CAH2_TRIHK Carbonic anhydrase 2 (Carbonic anhydrase II) (Carbonate dehydratase
II) (CA-II)
Length = 260
Score = 58.5 bits (140), Expect = 3e-08
Identities = 29/74 (39%), Positives = 43/74 (58%)
Frame = +1
Query: 646 WGYGADDGPHTWHASFPSAGGCRQSPINIELDKLKYDITLNIRPLTVAFEPERQLSQTLV 825
WGY +GP W +FP A G RQSPI+I+ YD TL +PL + ++P L ++
Sbjct: 5 WGYADHNGPQKWCENFPIANGPRQSPIDIQTKGASYDDTL--KPLKLKYDPTTSLD--IL 60
Query: 826 YTGHNFRIDVAGDH 867
GH+F++ A D+
Sbjct: 61 NNGHSFQVTFADDN 74
>sp|P27139|CAH2_RAT Carbonic anhydrase II (Carbonate dehydratase II) (CA-II)
Length = 260
Score = 58.2 bits (139), Expect = 3e-08
Identities = 25/69 (36%), Positives = 43/69 (62%)
Frame = +1
Query: 646 WGYGADDGPHTWHASFPSAGGCRQSPINIELDKLKYDITLNIRPLTVAFEPERQLSQTLV 825
WGY +GP WH FP A G RQSP++I+ ++D +L +PL + + ++ S+++V
Sbjct: 5 WGYSKSNGPENWHKEFPIANGDRQSPVDIDTGTAQHDPSL--QPLLICY--DKVASKSIV 60
Query: 826 YTGHNFRID 852
GH+F ++
Sbjct: 61 NNGHSFNVE 69
>sp|P43166|CAH7_HUMAN Carbonic anhydrase VII (Carbonate dehydratase VII) (CA-VII)
Length = 264
Score = 57.8 bits (138), Expect = 4e-08
Identities = 30/69 (43%), Positives = 41/69 (59%)
Frame = +1
Query: 646 WGYGADDGPHTWHASFPSAGGCRQSPINIELDKLKYDITLNIRPLTVAFEPERQLSQTLV 825
WGYG DDGP WH +P A G RQSPINI + Y +L +PL +++E LS +
Sbjct: 7 WGYGQDDGPSHWHKLYPIAQGDRQSPINIISSQAVYSPSL--QPLELSYEACMSLS--IT 62
Query: 826 YTGHNFRID 852
GH+ ++D
Sbjct: 63 NNGHSVQVD 71
>sp|Q92051|CAHZ_BRARE Carbonic anhydrase (Carbonate dehydratase)
Length = 260
Score = 57.8 bits (138), Expect = 4e-08
Identities = 28/73 (38%), Positives = 46/73 (63%)
Frame = +1
Query: 646 WGYGADDGPHTWHASFPSAGGCRQSPINIELDKLKYDITLNIRPLTVAFEPERQLSQTLV 825
WGYG DGP +W SFP A G RQSPI+I + ++D +L + L + ++P +++++
Sbjct: 5 WGYGPADGPESWAESFPIANGPRQSPIDIVPTQAQHDPSL--KHLKLKYDP--ATTKSIL 60
Query: 826 YTGHNFRIDVAGD 864
GH+F++D D
Sbjct: 61 NNGHSFQVDFVDD 73
>sp|Q9ERQ8|CAH7_MOUSE Carbonic anhydrase 7 (Carbonic anhydrase VII) (Carbonate
dehydratase VII) (CA-VII)
Length = 264
Score = 57.4 bits (137), Expect = 6e-08
Identities = 30/69 (43%), Positives = 40/69 (57%)
Frame = +1
Query: 646 WGYGADDGPHTWHASFPSAGGCRQSPINIELDKLKYDITLNIRPLTVAFEPERQLSQTLV 825
WGYG DDGP WH +P A G RQSPINI + Y +L +PL + +E LS +
Sbjct: 7 WGYGQDDGPSNWHKLYPIAQGDRQSPINIISSQAVYSPSL--QPLELFYEACMSLS--IT 62
Query: 826 YTGHNFRID 852
GH+ ++D
Sbjct: 63 NNGHSVQVD 71
>sp|P00920|CAH2_MOUSE Carbonic anhydrase 2 (Carbonic anhydrase II) (Carbonate dehydratase
II) (CA-II)
Length = 260
Score = 57.0 bits (136), Expect = 7e-08
Identities = 25/69 (36%), Positives = 42/69 (60%)
Frame = +1
Query: 646 WGYGADDGPHTWHASFPSAGGCRQSPINIELDKLKYDITLNIRPLTVAFEPERQLSQTLV 825
WGY +GP WH FP A G RQSP++I+ +D L +PL +++ ++ S+++V
Sbjct: 5 WGYSKHNGPENWHKDFPIANGDRQSPVDIDTATAHHDPAL--QPLLISY--DKAASKSIV 60
Query: 826 YTGHNFRID 852
GH+F ++
Sbjct: 61 NNGHSFNVE 69
>sp|Q8N1Q1|CAH13_HUMAN Carbonic anhydrase XIII (Carbonate dehydratase XIII) (CA-XIII)
Length = 262
Score = 56.2 bits (134), Expect = 1e-07
Identities = 27/69 (39%), Positives = 43/69 (62%)
Frame = +1
Query: 646 WGYGADDGPHTWHASFPSAGGCRQSPINIELDKLKYDITLNIRPLTVAFEPERQLSQTLV 825
WGY +GP W FP A G +QSPI I+ ++KYD +L RPL++ ++P ++ +
Sbjct: 6 WGYREHNGPIHWKEFFPIADGDQQSPIEIKTKEVKYDSSL--RPLSIKYDPSS--AKIIS 61
Query: 826 YTGHNFRID 852
+GH+F +D
Sbjct: 62 NSGHSFNVD 70
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,133,452
Number of Sequences: 369166
Number of extensions: 2010150
Number of successful extensions: 5418
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5416
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9462723610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)