Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_007_G17
(822 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P79896|ADHX_SPAAU Alcohol dehydrogenase class III (S-(hy... 377 e-104
sp|P11766|ADHX_HUMAN Alcohol dehydrogenase class III chi ch... 373 e-103
sp|P80467|ADHX_UROHA Alcohol dehydrogenase class III (Gluta... 373 e-103
sp|P81600|ADHH_GADMO Alcohol dehydrogenase class III H chai... 371 e-102
sp|P19854|ADHX_HORSE Alcohol dehydrogenase class III chain ... 370 e-102
sp|O19053|ADHX_RABIT Alcohol dehydrogenase class III chain ... 367 e-101
sp|P81601|ADHL_GADMO Alcohol dehydrogenase class III L chai... 366 e-101
sp|P12711|ADHX_RAT Alcohol dehydrogenase class III (Alcohol... 362 e-100
sp|P81431|ADHX_OCTVU Alcohol dehydrogenase class III (Gluta... 360 2e-99
sp|P28474|ADHX_MOUSE Alcohol dehydrogenase class III (Alcoh... 360 3e-99
>sp|P79896|ADHX_SPAAU Alcohol dehydrogenase class III (S-(hydroxymethyl)glutathione
dehydrogenase) (Glutathione-dependent formaldehyde
dehydrogenase) (FDH) (FALDH)
Length = 376
Score = 377 bits (969), Expect = e-104
Identities = 180/272 (66%), Positives = 213/272 (78%)
Frame = +1
Query: 7 PGDHVIPLYTPQCRNCKFCKSEKTNLCSLIRTTQGAGLMPDGTSRFTCNGKTVFHYMGCS 186
PGD VIPLY PQC CKFCK+ KTNLC IR TQG GL+PD TSRFTC GK VFH+MG S
Sbjct: 87 PGDTVIPLYVPQCGECKFCKNPKTNLCQKIRITQGQGLLPDKTSRFTCKGKQVFHFMGTS 146
Query: 187 TFSEYTVVAEISLAKISKEAPLNRVCLLGCGITTGFGAAINTAKVEPGSICAVWGLGAVG 366
TFSEYTVVA+ISLAK++++AP+++VCLLGCGI+TG+GAA+NTAKVEPGS CAV+GLGAVG
Sbjct: 147 TFSEYTVVADISLAKVNEKAPMDKVCLLGCGISTGYGAALNTAKVEPGSTCAVFGLGAVG 206
Query: 367 LATIMGCKXXXXXXXXXXXXNTNKFPYAKQFGATECVNPLDYKDKPFQQVIIDMTDGGCD 546
LA IMGCK N KF AK+FGATE VNP D+ KP Q+V+++MTDGG D
Sbjct: 207 LAVIMGCKVAGATRIIGIDLNPAKFETAKEFGATEFVNPKDH-SKPIQEVLVEMTDGGVD 265
Query: 547 FTFECVGNVETMRCALEACHKXXXXXXXXXXXXXXKEISTRPFQLVTGRVWKGTAFGGFK 726
++FEC+GNV+ MR ALEACHK +EISTRPFQLVTGRVWKGTAFGG+K
Sbjct: 266 YSFECIGNVQIMRAALEACHKGWGESVIIGVAGAGQEISTRPFQLVTGRVWKGTAFGGWK 325
Query: 727 SRDSVPKLVNDYLDKKIKIDEFVTHEMPLKSI 822
S +SVPKLV DY+ KK+K+DEFVTH +P + I
Sbjct: 326 SVESVPKLVEDYMSKKLKVDEFVTHTLPFEKI 357
>sp|P11766|ADHX_HUMAN Alcohol dehydrogenase class III chi chain (Glutathione-dependent
formaldehyde dehydrogenase) (FDH)
Length = 374
Score = 373 bits (958), Expect = e-103
Identities = 177/271 (65%), Positives = 209/271 (77%)
Frame = +1
Query: 10 GDHVIPLYTPQCRNCKFCKSEKTNLCSLIRTTQGAGLMPDGTSRFTCNGKTVFHYMGCST 189
GD VIPLY PQC CKFC + KTNLC IR TQG GLMPDGTSRFTC GKT+ HYMG ST
Sbjct: 86 GDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTST 145
Query: 190 FSEYTVVAEISLAKISKEAPLNRVCLLGCGITTGFGAAINTAKVEPGSICAVWGLGAVGL 369
FSEYTVVA+IS+AKI APL++VCLLGCGI+TG+GAA+NTAK+EPGS+CAV+GLG VGL
Sbjct: 146 FSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGL 205
Query: 370 ATIMGCKXXXXXXXXXXXXNTNKFPYAKQFGATECVNPLDYKDKPFQQVIIDMTDGGCDF 549
A IMGCK N +KF AK+FGATEC+NP D+ KP Q+V+I+MTDGG D+
Sbjct: 206 AVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDF-SKPIQEVLIEMTDGGVDY 264
Query: 550 TFECVGNVETMRCALEACHKXXXXXXXXXXXXXXKEISTRPFQLVTGRVWKGTAFGGFKS 729
+FEC+GNV+ MR ALEACHK +EI+TRPFQLVTGR WKGTAFGG+KS
Sbjct: 265 SFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKS 324
Query: 730 RDSVPKLVNDYLDKKIKIDEFVTHEMPLKSI 822
+SVPKLV++Y+ KKIK+DEFVTH + I
Sbjct: 325 VESVPKLVSEYMSKKIKVDEFVTHNLSFDEI 355
>sp|P80467|ADHX_UROHA Alcohol dehydrogenase class III (Glutathione-dependent formaldehyde
dehydrogenase) (FDH)
Length = 373
Score = 373 bits (957), Expect = e-103
Identities = 176/272 (64%), Positives = 210/272 (77%)
Frame = +1
Query: 7 PGDHVIPLYTPQCRNCKFCKSEKTNLCSLIRTTQGAGLMPDGTSRFTCNGKTVFHYMGCS 186
PGD VIPLY PQC CKFC + KTNLC IR TQG G+MPDGTSRFTC GK V H+MG S
Sbjct: 84 PGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGVMPDGTSRFTCKGKQVLHFMGTS 143
Query: 187 TFSEYTVVAEISLAKISKEAPLNRVCLLGCGITTGFGAAINTAKVEPGSICAVWGLGAVG 366
TFSEYTVVA+ISL KI+ APL++VCLLGCG++TG+GAA+NTAKVEPGS CAV+GLG VG
Sbjct: 144 TFSEYTVVADISLTKINASAPLDKVCLLGCGVSTGYGAALNTAKVEPGSTCAVFGLGGVG 203
Query: 367 LATIMGCKXXXXXXXXXXXXNTNKFPYAKQFGATECVNPLDYKDKPFQQVIIDMTDGGCD 546
LA IMGCK N +KF AK+FGATEC++P D+K KP Q+V+I+MTDGG D
Sbjct: 204 LAVIMGCKVAGASRIIGIDLNKDKFAKAKEFGATECISPADFK-KPIQEVLIEMTDGGVD 262
Query: 547 FTFECVGNVETMRCALEACHKXXXXXXXXXXXXXXKEISTRPFQLVTGRVWKGTAFGGFK 726
++FEC+GNV MR ALEACHK +EI+TRPFQLVTGR WKGTAFGG+K
Sbjct: 263 YSFECIGNVGVMRAALEACHKGWGVSVIVGVAAAGQEIATRPFQLVTGRTWKGTAFGGWK 322
Query: 727 SRDSVPKLVNDYLDKKIKIDEFVTHEMPLKSI 822
S +SVPKLV++Y+ KK+K+DEFVTH +P + I
Sbjct: 323 SVESVPKLVDEYMSKKMKVDEFVTHTLPFEQI 354
>sp|P81600|ADHH_GADMO Alcohol dehydrogenase class III H chain (Glutathione-dependent
formaldehyde dehydrogenase) (FDH)
Length = 375
Score = 371 bits (953), Expect = e-102
Identities = 177/271 (65%), Positives = 209/271 (77%)
Frame = +1
Query: 10 GDHVIPLYTPQCRNCKFCKSEKTNLCSLIRTTQGAGLMPDGTSRFTCNGKTVFHYMGCST 189
GD VIPLY PQC CKFCK+ KTNLC IR TQG GLMPD TSRFTC GK +FH+MG ST
Sbjct: 87 GDTVIPLYVPQCGECKFCKNPKTNLCQKIRVTQGRGLMPDNTSRFTCKGKQLFHFMGTST 146
Query: 190 FSEYTVVAEISLAKISKEAPLNRVCLLGCGITTGFGAAINTAKVEPGSICAVWGLGAVGL 369
FSEYTVVA+ISLA + +APL++VCLLGCGI+TG+GAA+NTAKVEPGS CAV+GLGAVGL
Sbjct: 147 FSEYTVVADISLANVDPKAPLDKVCLLGCGISTGYGAALNTAKVEPGSTCAVFGLGAVGL 206
Query: 370 ATIMGCKXXXXXXXXXXXXNTNKFPYAKQFGATECVNPLDYKDKPFQQVIIDMTDGGCDF 549
A IMGCK N KF A +FGATEC+NP D+ +P Q+V+++MTDGG D+
Sbjct: 207 AAIMGCKVAGATRIIGVDINPEKFGKAAEFGATECLNPKDHA-RPVQEVLVEMTDGGVDY 265
Query: 550 TFECVGNVETMRCALEACHKXXXXXXXXXXXXXXKEISTRPFQLVTGRVWKGTAFGGFKS 729
+FEC+GNVE MR ALEACHK +EI+TRPFQLVTGRVWK TAFGG+KS
Sbjct: 266 SFECIGNVEIMRSALEACHKGWGESVIIGVAGAGQEIATRPFQLVTGRVWKATAFGGWKS 325
Query: 730 RDSVPKLVNDYLDKKIKIDEFVTHEMPLKSI 822
+SVPKLV DY++KK+K+DEFVTH +P SI
Sbjct: 326 VESVPKLVEDYMNKKLKVDEFVTHTLPFDSI 356
>sp|P19854|ADHX_HORSE Alcohol dehydrogenase class III chain (Glutathione-dependent
formaldehyde dehydrogenase) (FDH) (FALDH)
Length = 373
Score = 370 bits (951), Expect = e-102
Identities = 174/271 (64%), Positives = 209/271 (77%)
Frame = +1
Query: 10 GDHVIPLYTPQCRNCKFCKSEKTNLCSLIRTTQGAGLMPDGTSRFTCNGKTVFHYMGCST 189
GD VIPLY PQC CKFC + +TNLC IRTTQG GLMPDGTSRFTC GKT+ HYMG ST
Sbjct: 85 GDTVIPLYIPQCGECKFCLNPQTNLCQKIRTTQGKGLMPDGTSRFTCKGKTILHYMGTST 144
Query: 190 FSEYTVVAEISLAKISKEAPLNRVCLLGCGITTGFGAAINTAKVEPGSICAVWGLGAVGL 369
FSEYTVVA+IS+AKI APL++VCLLGCG++TG+GAA+NTAKVEPGS CA++GLG VGL
Sbjct: 145 FSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYGAAVNTAKVEPGSTCAIFGLGGVGL 204
Query: 370 ATIMGCKXXXXXXXXXXXXNTNKFPYAKQFGATECVNPLDYKDKPFQQVIIDMTDGGCDF 549
A IMGCK N +KF AK+FGA+EC+NP D+ KP Q+V+I+MTDGG D+
Sbjct: 205 AVIMGCKVAGASRIIGVDINKDKFAKAKEFGASECINPQDF-SKPIQEVLIEMTDGGVDY 263
Query: 550 TFECVGNVETMRCALEACHKXXXXXXXXXXXXXXKEISTRPFQLVTGRVWKGTAFGGFKS 729
+FEC+GNV+ MR ALEACHK +EI+TRPFQLVTGR WKGTAFGG+KS
Sbjct: 264 SFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKS 323
Query: 730 RDSVPKLVNDYLDKKIKIDEFVTHEMPLKSI 822
+S+PKLV++Y+ KKIK+DEFVTH + I
Sbjct: 324 VESIPKLVSEYMSKKIKVDEFVTHSLSFDQI 354
>sp|O19053|ADHX_RABIT Alcohol dehydrogenase class III chain (S-(hydroxymethyl)glutathione
dehydrogenase) (Glutathione-dependent formaldehyde
dehydrogenase) (FDH) (FALDH)
Length = 374
Score = 367 bits (942), Expect = e-101
Identities = 175/271 (64%), Positives = 206/271 (76%)
Frame = +1
Query: 10 GDHVIPLYTPQCRNCKFCKSEKTNLCSLIRTTQGAGLMPDGTSRFTCNGKTVFHYMGCST 189
GD VIPLY PQC CKFC + KTNLC IR TQG GLMPDGTSRFTC GKT+ HYMG ST
Sbjct: 86 GDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTST 145
Query: 190 FSEYTVVAEISLAKISKEAPLNRVCLLGCGITTGFGAAINTAKVEPGSICAVWGLGAVGL 369
FSEYTVVA+IS+AKI APL++VCLLGCGI+TG+GAA+NTAKVEPGS CAV+GLG VGL
Sbjct: 146 FSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAALNTAKVEPGSTCAVFGLGGVGL 205
Query: 370 ATIMGCKXXXXXXXXXXXXNTNKFPYAKQFGATECVNPLDYKDKPFQQVIIDMTDGGCDF 549
A IMGCK N +KF AK+FGATEC+NP D+ KP Q+V+++ TDGG D+
Sbjct: 206 AAIMGCKAAGASRIIAVDINKDKFARAKEFGATECINPQDF-SKPIQEVLVEKTDGGVDY 264
Query: 550 TFECVGNVETMRCALEACHKXXXXXXXXXXXXXXKEISTRPFQLVTGRVWKGTAFGGFKS 729
+FEC+GNV+ MR ALEACHK +EISTRPFQLVTGR WKGTAFGG+KS
Sbjct: 265 SFECIGNVKVMRAALEACHKGWGVSVVVGVAGAGEEISTRPFQLVTGRTWKGTAFGGWKS 324
Query: 730 RDSVPKLVNDYLDKKIKIDEFVTHEMPLKSI 822
+SVPKLV++Y+ KKI +DEFVT+ + I
Sbjct: 325 VESVPKLVSEYMSKKINVDEFVTNTLSFDQI 355
>sp|P81601|ADHL_GADMO Alcohol dehydrogenase class III L chain (Glutathione-dependent
formaldehyde dehydrogenase) (FDH)
Length = 375
Score = 366 bits (940), Expect = e-101
Identities = 173/271 (63%), Positives = 211/271 (77%)
Frame = +1
Query: 10 GDHVIPLYTPQCRNCKFCKSEKTNLCSLIRTTQGAGLMPDGTSRFTCNGKTVFHYMGCST 189
GD VIPLY PQC CKFCK+ KTNLC IR TQG GLMP+GTSRF+CNG+ +FH+MG ST
Sbjct: 87 GDAVIPLYVPQCGECKFCKNPKTNLCQKIRLTQGKGLMPNGTSRFSCNGQVLFHFMGSST 146
Query: 190 FSEYTVVAEISLAKISKEAPLNRVCLLGCGITTGFGAAINTAKVEPGSICAVWGLGAVGL 369
FSEYTVVAEISLAK+ ++APL++VCLLGC I+TG+GAA+NTAKVE GS CAV+GLGA+GL
Sbjct: 147 FSEYTVVAEISLAKVHEKAPLDKVCLLGCAISTGYGAALNTAKVEAGSTCAVFGLGALGL 206
Query: 370 ATIMGCKXXXXXXXXXXXXNTNKFPYAKQFGATECVNPLDYKDKPFQQVIIDMTDGGCDF 549
A IMGC+ N +KF AK+FGAT+ VNP D+ KP +QV+++MTDGG D+
Sbjct: 207 AVIMGCQAAGASRIIAIDVNPDKFRIAKEFGATDLVNPKDH-SKPVEQVLVEMTDGGVDY 265
Query: 550 TFECVGNVETMRCALEACHKXXXXXXXXXXXXXXKEISTRPFQLVTGRVWKGTAFGGFKS 729
+FECVGN+ MR ALEACHK +EISTRPFQLVTGR WKGTAFGG+KS
Sbjct: 266 SFECVGNIAVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRTWKGTAFGGYKS 325
Query: 730 RDSVPKLVNDYLDKKIKIDEFVTHEMPLKSI 822
+SVPKLV +Y++KK+K+DEFVTH +P + I
Sbjct: 326 VESVPKLVEEYMNKKVKVDEFVTHTLPFEKI 356
>sp|P12711|ADHX_RAT Alcohol dehydrogenase class III (Alcohol dehydrogenase 2)
(Glutathione-dependent formaldehyde dehydrogenase) (FDH)
(FALDH) (Alcohol dehydrogenase-B2)
Length = 373
Score = 362 bits (928), Expect = e-100
Identities = 175/271 (64%), Positives = 204/271 (75%)
Frame = +1
Query: 10 GDHVIPLYTPQCRNCKFCKSEKTNLCSLIRTTQGAGLMPDGTSRFTCNGKTVFHYMGCST 189
GD VIPLY PQC CKFC + KTNLC IR TQG GLMPDGTSRFTC GK + H+MG ST
Sbjct: 85 GDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKPILHFMGTST 144
Query: 190 FSEYTVVAEISLAKISKEAPLNRVCLLGCGITTGFGAAINTAKVEPGSICAVWGLGAVGL 369
FSEYTVVA+IS+AKI APL++VCLLGCGI+TG+GAA+NTAKVEPGS CAV+GLG VGL
Sbjct: 145 FSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAAVNTAKVEPGSTCAVFGLGGVGL 204
Query: 370 ATIMGCKXXXXXXXXXXXXNTNKFPYAKQFGATECVNPLDYKDKPFQQVIIDMTDGGCDF 549
A IMGCK N +KF AK+FGATEC+NP D+ K Q+V+I+MTDGG DF
Sbjct: 205 AVIMGCKVAGASRIIGIDINKDKFAKAKEFGATECINPQDF-SKSIQEVLIEMTDGGVDF 263
Query: 550 TFECVGNVETMRCALEACHKXXXXXXXXXXXXXXKEISTRPFQLVTGRVWKGTAFGGFKS 729
+FEC+GNV+ MR ALEA HK +EISTRPFQLVTGR WKGTAFGG+KS
Sbjct: 264 SFECIGNVKVMRSALEAAHKGWGVSVVVGVAASGEEISTRPFQLVTGRTWKGTAFGGWKS 323
Query: 730 RDSVPKLVNDYLDKKIKIDEFVTHEMPLKSI 822
+SVPKLV++Y+ KKIK+DEFVT + I
Sbjct: 324 VESVPKLVSEYMSKKIKVDEFVTGNLSFDQI 354
>sp|P81431|ADHX_OCTVU Alcohol dehydrogenase class III (Glutathione-dependent formaldehyde
dehydrogenase) (FDH)
Length = 378
Score = 360 bits (925), Expect = 2e-99
Identities = 175/274 (63%), Positives = 206/274 (75%)
Frame = +1
Query: 1 VSPGDHVIPLYTPQCRNCKFCKSEKTNLCSLIRTTQGAGLMPDGTSRFTCNGKTVFHYMG 180
V PGD VIPLY PQC CKFC + KTNLC IR TQG G+MPDGT+RFTC GK VFH+MG
Sbjct: 85 VKPGDTVIPLYVPQCYECKFCLNPKTNLCQKIRVTQGKGVMPDGTTRFTCKGKEVFHFMG 144
Query: 181 CSTFSEYTVVAEISLAKISKEAPLNRVCLLGCGITTGFGAAINTAKVEPGSICAVWGLGA 360
CSTFSE+TVVAEIS+AK++ +A L++VCLLGCGI+TG+GAA+NTA VE GS CAVWGLGA
Sbjct: 145 CSTFSEFTVVAEISIAKVNPKAALDKVCLLGCGISTGYGAALNTAAVEKGSNCAVWGLGA 204
Query: 361 VGLATIMGCKXXXXXXXXXXXXNTNKFPYAKQFGATECVNPLDYKDKPFQQVIIDMTDGG 540
VGLA MGCK N +KF K+FG TE VNP + K Q+V+ +MTD G
Sbjct: 205 VGLAVAMGCKAAGAARIIGIDINESKFEIGKKFGITEFVNPKKF-CKSVQKVLGEMTDVG 263
Query: 541 CDFTFECVGNVETMRCALEACHKXXXXXXXXXXXXXXKEISTRPFQLVTGRVWKGTAFGG 720
DFTFEC+GNV MR ALE+CHK +EISTRPFQLVTGRVWKGTAFGG
Sbjct: 264 VDFTFECIGNVGVMRAALESCHKGWGTSVIVGVAAHGEEISTRPFQLVTGRVWKGTAFGG 323
Query: 721 FKSRDSVPKLVNDYLDKKIKIDEFVTHEMPLKSI 822
FKSRDSVPKLV+DY++KK+ +DEFV+H++ K I
Sbjct: 324 FKSRDSVPKLVDDYMNKKLLLDEFVSHKLSFKKI 357
>sp|P28474|ADHX_MOUSE Alcohol dehydrogenase class III (Alcohol dehydrogenase 2)
(Glutathione-dependent formaldehyde dehydrogenase) (FDH)
(FALDH) (Alcohol dehydrogenase-B2) (ADH-B2)
Length = 374
Score = 360 bits (924), Expect = 3e-99
Identities = 173/271 (63%), Positives = 206/271 (76%)
Frame = +1
Query: 10 GDHVIPLYTPQCRNCKFCKSEKTNLCSLIRTTQGAGLMPDGTSRFTCNGKTVFHYMGCST 189
GD VIPLY PQC CKFC + KTNLC IR TQG GLMPDGTSRFTC GK+VFH+MG ST
Sbjct: 86 GDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKSVFHFMGTST 145
Query: 190 FSEYTVVAEISLAKISKEAPLNRVCLLGCGITTGFGAAINTAKVEPGSICAVWGLGAVGL 369
FSEYTVVA+IS+AKI APL++VCLLGCGI+TG+GAA+NTAKVEPGS CAV+GLG VGL
Sbjct: 146 FSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAAVNTAKVEPGSTCAVFGLGGVGL 205
Query: 370 ATIMGCKXXXXXXXXXXXXNTNKFPYAKQFGATECVNPLDYKDKPFQQVIIDMTDGGCDF 549
A IMGCK N +KF AK+FGA+EC++P D+ K Q+V+++MTDGG D+
Sbjct: 206 AVIMGCKVAGASRIIGIDINKDKFAKAKEFGASECISPQDF-SKSIQEVLVEMTDGGVDY 264
Query: 550 TFECVGNVETMRCALEACHKXXXXXXXXXXXXXXKEISTRPFQLVTGRVWKGTAFGGFKS 729
+FEC+GNV+ MR ALEA HK +EISTRPFQLVTGR WKGTAFGG+KS
Sbjct: 265 SFECIGNVKVMRSALEAAHKGWGVSVVVGVAASGEEISTRPFQLVTGRTWKGTAFGGWKS 324
Query: 730 RDSVPKLVNDYLDKKIKIDEFVTHEMPLKSI 822
+SVPKLV++Y+ KKIK+DEFVT + I
Sbjct: 325 VESVPKLVSEYMSKKIKVDEFVTGNLSFDQI 355
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,760,389
Number of Sequences: 369166
Number of extensions: 1875912
Number of successful extensions: 4910
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4719
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7907893860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)