Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_007_G03
(910 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-t... 582 e-166
sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1... 581 e-165
sp|Q8T6A5|TBA1_APLCA Tubulin alpha-1 chain 581 e-165
sp|P06603|TBA1_DROME Tubulin alpha-1 chain 580 e-165
sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain 580 e-165
sp|P18258|TBA1_PARLI Tubulin alpha-1 chain 579 e-165
sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific 578 e-165
sp|P52273|TBA_BOMMO Tubulin alpha chain 578 e-165
sp|P68373|TBA6_MOUSE Tubulin alpha-6 chain (Alpha-tubulin 6... 577 e-164
sp|Q9BQE3|TBA6_HUMAN Tubulin alpha-6 chain (Alpha-tubulin 6) 577 e-164
>sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin
isotype M-alpha-3/7)
sp|Q68FR8|TBA3_RAT Tubulin alpha-3 chain (Alpha-tubulin 3)
sp|Q13748|TBA2_HUMAN Tubulin alpha-2 chain (Alpha-tubulin 2)
Length = 450
Score = 582 bits (1500), Expect = e-166
Identities = 283/301 (94%), Positives = 289/301 (96%)
Frame = +1
Query: 1 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSVYPAPQISTAVVEPYNSIL 180
TGLQGFLIFH LLMERLSVDYGKKSKLEF++YPAPQ+STAVVEPYNSIL
Sbjct: 130 TGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 189
Query: 181 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLVGQIVSSITASLRFDGALN 360
TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRL+GQIVSSITASLRFDGALN
Sbjct: 190 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 249
Query: 361 VDLTEFQTNLVPYPRIHFPLATFAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH 540
VDLTEFQTNLVPYPRIHFPLAT+APVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH
Sbjct: 250 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH 309
Query: 541 GKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA 720
GKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA
Sbjct: 310 GKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA 369
Query: 721 KVQRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALE 900
KVQRAVCMLSNTTAIAEAWARLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE
Sbjct: 370 KVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE 429
Query: 901 K 903
K
Sbjct: 430 K 430
>sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin isotype
M-alpha-1)
sp|P68362|TBA2_CRIGR Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin II)
sp|Q71U36|TBA3_HUMAN Tubulin alpha-3 chain (Alpha-tubulin 3) (Tubulin B-alpha-1)
sp|P68370|TBA1_RAT Tubulin alpha-1 chain (Alpha-tubulin 1)
Length = 451
Score = 581 bits (1497), Expect = e-165
Identities = 281/301 (93%), Positives = 289/301 (96%)
Frame = +1
Query: 1 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSVYPAPQISTAVVEPYNSIL 180
TGLQGFL+FH LLMERLSVDYGKKSKLEFS+YPAPQ+STAVVEPYNSIL
Sbjct: 130 TGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSIL 189
Query: 181 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLVGQIVSSITASLRFDGALN 360
TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRL+GQIVSSITASLRFDGALN
Sbjct: 190 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 249
Query: 361 VDLTEFQTNLVPYPRIHFPLATFAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH 540
VDLTEFQTNLVPYPRIHFPLAT+APVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH
Sbjct: 250 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH 309
Query: 541 GKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA 720
GKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA
Sbjct: 310 GKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA 369
Query: 721 KVQRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALE 900
KVQRAVCMLSNTTAIAEAWARLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEARED+AALE
Sbjct: 370 KVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALE 429
Query: 901 K 903
K
Sbjct: 430 K 430
>sp|Q8T6A5|TBA1_APLCA Tubulin alpha-1 chain
Length = 451
Score = 581 bits (1497), Expect = e-165
Identities = 283/301 (94%), Positives = 289/301 (96%)
Frame = +1
Query: 1 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSVYPAPQISTAVVEPYNSIL 180
TGLQGFLIFH LLMERLSVDYGKKSKLEFSVYPAPQ+STAVVEPYNSIL
Sbjct: 130 TGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSVYPAPQVSTAVVEPYNSIL 189
Query: 181 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLVGQIVSSITASLRFDGALN 360
TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERP+YTNLNRL+GQIVSSITASLRFDGALN
Sbjct: 190 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALN 249
Query: 361 VDLTEFQTNLVPYPRIHFPLATFAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH 540
VDLTEFQTNLVPYPRIHFPLAT+APVISAEKAYHEQLSVAEITNACFEPANQ+VKCDPRH
Sbjct: 250 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQLVKCDPRH 309
Query: 541 GKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA 720
GKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA
Sbjct: 310 GKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA 369
Query: 721 KVQRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALE 900
KVQRAVCMLSNTTAIAEAWARLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE
Sbjct: 370 KVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE 429
Query: 901 K 903
K
Sbjct: 430 K 430
>sp|P06603|TBA1_DROME Tubulin alpha-1 chain
Length = 450
Score = 580 bits (1496), Expect = e-165
Identities = 282/301 (93%), Positives = 288/301 (95%)
Frame = +1
Query: 1 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSVYPAPQISTAVVEPYNSIL 180
TGLQGFLIFH LLMERLSVDYGKKSKLEF++YPAPQ+STAVVEPYNSIL
Sbjct: 130 TGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 189
Query: 181 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLVGQIVSSITASLRFDGALN 360
TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRL+GQIVSSITASLRFDGALN
Sbjct: 190 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 249
Query: 361 VDLTEFQTNLVPYPRIHFPLATFAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH 540
VDLTEFQTNLVPYPRIHFPL T+APVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH
Sbjct: 250 VDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH 309
Query: 541 GKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA 720
GKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA
Sbjct: 310 GKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA 369
Query: 721 KVQRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALE 900
KVQRAVCMLSNTTAIAEAWARLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE
Sbjct: 370 KVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE 429
Query: 901 K 903
K
Sbjct: 430 K 430
>sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain
Length = 452
Score = 580 bits (1495), Expect = e-165
Identities = 282/301 (93%), Positives = 289/301 (96%)
Frame = +1
Query: 1 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSVYPAPQISTAVVEPYNSIL 180
TGLQGFLIFH LLMERLSVDYGKKSKLEF++YPAPQISTAVVEPYNSIL
Sbjct: 130 TGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSIL 189
Query: 181 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLVGQIVSSITASLRFDGALN 360
TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRL+GQIVSSITASLRFDGALN
Sbjct: 190 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 249
Query: 361 VDLTEFQTNLVPYPRIHFPLATFAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH 540
VDLTEFQTNLVPYPRIHFPLAT+APVISAEKAYHEQL+VAEITNACFEPANQMVKCDPRH
Sbjct: 250 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRH 309
Query: 541 GKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA 720
GKYM+CCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA
Sbjct: 310 GKYMSCCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA 369
Query: 721 KVQRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALE 900
KVQRAVCMLSNTTAIAEAWARLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE
Sbjct: 370 KVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE 429
Query: 901 K 903
K
Sbjct: 430 K 430
>sp|P18258|TBA1_PARLI Tubulin alpha-1 chain
Length = 452
Score = 579 bits (1493), Expect = e-165
Identities = 282/301 (93%), Positives = 289/301 (96%)
Frame = +1
Query: 1 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSVYPAPQISTAVVEPYNSIL 180
TGLQGFLIFH LLMERLSVDYGKKSKLEF+VYPAPQISTAVVEPYNSIL
Sbjct: 130 TGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSIL 189
Query: 181 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLVGQIVSSITASLRFDGALN 360
TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRL+GQIVSSITASLRFDGALN
Sbjct: 190 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 249
Query: 361 VDLTEFQTNLVPYPRIHFPLATFAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH 540
VDLTEFQTNLVPYPRIHFPLAT+APVISAEKAYHEQL+V+EITNACFEPANQMVKCDPRH
Sbjct: 250 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEITNACFEPANQMVKCDPRH 309
Query: 541 GKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA 720
GKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA
Sbjct: 310 GKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA 369
Query: 721 KVQRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALE 900
KVQRAVCMLSNTTAIAEAWARLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE
Sbjct: 370 KVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE 429
Query: 901 K 903
K
Sbjct: 430 K 430
>sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific
Length = 450
Score = 578 bits (1491), Expect = e-165
Identities = 281/301 (93%), Positives = 287/301 (95%)
Frame = +1
Query: 1 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSVYPAPQISTAVVEPYNSIL 180
TGLQGFLIFH LLMERLSVDYGKKSKLEF++YPAPQ+STAVVEPYNSIL
Sbjct: 130 TGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 189
Query: 181 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLVGQIVSSITASLRFDGALN 360
TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRL+GQIVSSITASLRFDGALN
Sbjct: 190 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALN 249
Query: 361 VDLTEFQTNLVPYPRIHFPLATFAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH 540
VDLTEFQTNLVPYPRIHFPL T+APVISAEKAYHE LSVAEITNACFEPANQMVKCDPRH
Sbjct: 250 VDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEMLSVAEITNACFEPANQMVKCDPRH 309
Query: 541 GKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA 720
GKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA
Sbjct: 310 GKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA 369
Query: 721 KVQRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALE 900
KVQRAVCMLSNTTAIAEAWARLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE
Sbjct: 370 KVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE 429
Query: 901 K 903
K
Sbjct: 430 K 430
>sp|P52273|TBA_BOMMO Tubulin alpha chain
Length = 450
Score = 578 bits (1489), Expect = e-165
Identities = 281/301 (93%), Positives = 287/301 (95%)
Frame = +1
Query: 1 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSVYPAPQISTAVVEPYNSIL 180
TGLQGFLIFH LLMERLSVDYGKKSKLEF++YPAPQ+STAVVEPYNSIL
Sbjct: 130 TGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSIL 189
Query: 181 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLVGQIVSSITASLRFDGALN 360
TTHTTLEHSDCAFMVDNEAIYDICRRNLDIE PTYTNLNRL+GQIVSSITASLRFDGALN
Sbjct: 190 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIEPPTYTNLNRLIGQIVSSITASLRFDGALN 249
Query: 361 VDLTEFQTNLVPYPRIHFPLATFAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH 540
VDLTEFQTNLVPYPRIHFPL T+APVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH
Sbjct: 250 VDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH 309
Query: 541 GKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA 720
GKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA
Sbjct: 310 GKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA 369
Query: 721 KVQRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALE 900
KVQRAVCMLSNTTAIAEAWARLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALE
Sbjct: 370 KVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALE 429
Query: 901 K 903
K
Sbjct: 430 K 430
>sp|P68373|TBA6_MOUSE Tubulin alpha-6 chain (Alpha-tubulin 6) (Alpha-tubulin isotype
M-alpha-6)
sp|P68365|TBA3_CRIGR Tubulin alpha-3 chain (Alpha-tubulin 3) (Alpha-tubulin III)
Length = 449
Score = 577 bits (1488), Expect = e-164
Identities = 279/301 (92%), Positives = 288/301 (95%)
Frame = +1
Query: 1 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSVYPAPQISTAVVEPYNSIL 180
TGLQGFL+FH LLMERLSVDYGKKSKLEFS+YPAPQ+STAVVEPYNSIL
Sbjct: 130 TGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSIL 189
Query: 181 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLVGQIVSSITASLRFDGALN 360
TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRL+ QIVSSITASLRFDGALN
Sbjct: 190 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALN 249
Query: 361 VDLTEFQTNLVPYPRIHFPLATFAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH 540
VDLTEFQTNLVPYPRIHFPLAT+APVISAEKAYHEQL+VAEITNACFEPANQMVKCDPRH
Sbjct: 250 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRH 309
Query: 541 GKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA 720
GKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA
Sbjct: 310 GKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA 369
Query: 721 KVQRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALE 900
KVQRAVCMLSNTTAIAEAWARLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEARED+AALE
Sbjct: 370 KVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALE 429
Query: 901 K 903
K
Sbjct: 430 K 430
>sp|Q9BQE3|TBA6_HUMAN Tubulin alpha-6 chain (Alpha-tubulin 6)
Length = 449
Score = 577 bits (1487), Expect = e-164
Identities = 278/301 (92%), Positives = 288/301 (95%)
Frame = +1
Query: 1 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFSVYPAPQISTAVVEPYNSIL 180
TGLQGFL+FH LLMERLSVDYGKKSKLEFS+YPAPQ+STAVVEPYNSIL
Sbjct: 130 TGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSIL 189
Query: 181 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLVGQIVSSITASLRFDGALN 360
TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRL+ QIVSSITASLRFDGALN
Sbjct: 190 TTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALN 249
Query: 361 VDLTEFQTNLVPYPRIHFPLATFAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRH 540
VDLTEFQTNLVPYPRIHFPLAT+APVISAEKAYHEQL+VAEITNACFEPANQMVKCDPRH
Sbjct: 250 VDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRH 309
Query: 541 GKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA 720
GKYMACC+LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA
Sbjct: 310 GKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLA 369
Query: 721 KVQRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALE 900
KVQRAVCMLSNTTA+AEAWARLDHKFDLMY+KRAFVHWYVGEGMEEGEFSEARED+AALE
Sbjct: 370 KVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALE 429
Query: 901 K 903
K
Sbjct: 430 K 430
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,207,910
Number of Sequences: 369166
Number of extensions: 1905934
Number of successful extensions: 5308
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5031
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9222552960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)