Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_007_F16
(370 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P35479|CPI1_PIG Leukocyte cysteine proteinase inhibitor ... 73 2e-13
sp|P01040|CYTA_HUMAN Cystatin A (Stefin A) (Cystatin AS) 70 1e-12
sp|Q28988|CYTA1_PIG Cystatin A1 (Stefin A1) 67 2e-11
sp|Q28986|CYTA5_PIG Cystatin A5 (Stefin A5) 65 4e-11
sp|Q28987|CYTA8_PIG Cystatin A8 (Stefin A8) 65 5e-11
sp|Q8I030|CYTB_PANTR Cystatin B (Stefin B) 65 6e-11
sp|P80416|CYTA_BOVIN Cystatin A (Stefin A) (Cystatin AS) 64 8e-11
sp|P60576|CYTB_PONPY Cystatin B (Stefin B) >gi|45476793|sp|... 64 1e-10
sp|Q862Z5|CYTB_MACFU Cystatin B (Stefin B) 64 1e-10
sp|P01041|CYTB_RAT Cystatin B (Liver thiol proteinase inhib... 64 1e-10
>sp|P35479|CPI1_PIG Leukocyte cysteine proteinase inhibitor 1 (PLCPI) (Stefin D1)
Length = 103
Score = 72.8 bits (177), Expect = 2e-13
Identities = 41/89 (46%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Frame = +2
Query: 14 RTPSEEEKTILLTVKPQIEDQIGHSCSAFDILQLRSQVVAGTNYFAKVHIGDGKHIHIRV 193
R + E + I VKPQ+E++ + F+ + RSQVVAGTNY+ KVH+G ++HIRV
Sbjct: 15 RPATPEIQEIANKVKPQLEEKTNKTYEKFEAIIYRSQVVAGTNYYIKVHVGGNNYVHIRV 74
Query: 194 YQPLPGQGD-LALHGLQ-EKLKEDVLEYF 274
+Q LP Q D L L G Q +K K+D L F
Sbjct: 75 FQSLPHQEDPLKLIGYQVDKTKDDELTGF 103
>sp|P01040|CYTA_HUMAN Cystatin A (Stefin A) (Cystatin AS)
Length = 98
Score = 70.5 bits (171), Expect = 1e-12
Identities = 39/88 (44%), Positives = 58/88 (65%), Gaps = 2/88 (2%)
Frame = +2
Query: 17 TPSEEEKTILLTVKPQIEDQIGHSCSAFDILQLRSQVVAGTNYFAKVHIGDGKHIHIRVY 196
TP +E I+ VKPQ+E++ + + +Q ++QVVAGTNY+ KV GD K++H++V+
Sbjct: 13 TPEIQE--IVDKVKPQLEEKTNETYGKLEAVQYKTQVVAGTNYYIKVRAGDNKYMHLKVF 70
Query: 197 QPLPGQG-DLALHGLQ-EKLKEDVLEYF 274
+ LPGQ DL L G Q +K K+D L F
Sbjct: 71 KSLPGQNEDLVLTGYQVDKNKDDELTGF 98
>sp|Q28988|CYTA1_PIG Cystatin A1 (Stefin A1)
Length = 103
Score = 66.6 bits (161), Expect = 2e-11
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Frame = +2
Query: 14 RTPSEEEKTILLTVKPQIEDQIGHSCSAFDILQLRSQVVAGTNYFAKVHIGDGKHIHIRV 193
R + E + I TVK Q+E++ + F+ ++ +SQVVAG NY+ KVH+G ++HI+V
Sbjct: 15 RPATPEIQEIATTVKSQLEEKTNKTYEKFEAVEYKSQVVAGINYYIKVHVGGNSYVHIKV 74
Query: 194 YQPLPGQG-DLALHGLQ-EKLKEDVLEYF 274
++ LP Q L L G Q +K K+D L F
Sbjct: 75 FKSLPYQNKPLELSGYQVDKTKDDELTGF 103
>sp|Q28986|CYTA5_PIG Cystatin A5 (Stefin A5)
Length = 103
Score = 65.5 bits (158), Expect = 4e-11
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Frame = +2
Query: 14 RTPSEEEKTILLTVKPQIEDQIGHSCSAFDILQLRSQVVAGTNYFAKVHIGDGKHIHIRV 193
R + E + I VKPQ+E++ + F+ + RSQVVAGTNY+ KVH+G ++HI V
Sbjct: 15 RPATPEIQEIANKVKPQLEEKTKKTYEKFEAIIYRSQVVAGTNYYIKVHVGGNSYVHIIV 74
Query: 194 YQPLPGQGD-LALHGLQ-EKLKEDVLEYF 274
+Q LP + L L G Q +K K+D L F
Sbjct: 75 FQNLPQLNEPLKLIGYQVDKTKDDELTSF 103
>sp|Q28987|CYTA8_PIG Cystatin A8 (Stefin A8)
Length = 103
Score = 65.1 bits (157), Expect = 5e-11
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Frame = +2
Query: 14 RTPSEEEKTILLTVKPQIEDQIGHSCSAFDILQLRSQVVAGTNYFAKVHIGDGKHIHIRV 193
R + E + I VKPQ+E++ + F+ + RSQVVAGTNY+ KVH+G ++HI V
Sbjct: 15 RPATPEIQEIANKVKPQLEEKTKKTYEKFEAIIYRSQVVAGTNYYIKVHVGGNSYVHIIV 74
Query: 194 YQPLPGQGD-LALHGLQ-EKLKEDVLEYF 274
+Q LP + L L G Q +K K+D L F
Sbjct: 75 FQNLPQLNEPLKLIGYQVDKTKDDELTGF 103
>sp|Q8I030|CYTB_PANTR Cystatin B (Stefin B)
Length = 98
Score = 64.7 bits (156), Expect = 6e-11
Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Frame = +2
Query: 29 EEKTILLTVKPQIEDQIGHSCSAFDILQLRSQVVAGTNYFAKVHIGDGKHIHIRVYQPLP 208
E + I V+ Q+E++ F + +SQVVAGTNYF KVH+GD + +H+RV+Q LP
Sbjct: 15 ETQHIADQVRSQLEEKENKKFPVFKAVSFKSQVVAGTNYFIKVHVGDEEFVHLRVFQSLP 74
Query: 209 GQG-DLALHGLQ-EKLKEDVLEYF 274
+ L L Q K K D L YF
Sbjct: 75 HENKPLTLSNYQTNKAKHDELTYF 98
>sp|P80416|CYTA_BOVIN Cystatin A (Stefin A) (Cystatin AS)
Length = 98
Score = 64.3 bits (155), Expect = 8e-11
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Frame = +2
Query: 29 EEKTILLTVKPQIEDQIGHSCSAFDILQLRSQVVAGTNYFAKVHIGDGKHIHIRVYQPLP 208
E + I VKPQ+E++ + F ++ +SQVVAG NY+ K+ GD ++IHI+V++ LP
Sbjct: 15 EIQEIANMVKPQLEEKTNETYEEFTAIEYKSQVVAGINYYIKIQTGDNRYIHIKVFKSLP 74
Query: 209 GQG-DLALHGLQ-EKLKEDVLEYF 274
Q L L G Q +K K+D L F
Sbjct: 75 QQSHSLILTGYQVDKTKDDELAGF 98
>sp|P60576|CYTB_PONPY Cystatin B (Stefin B)
sp|P60575|CYTB_PANPA Cystatin B (Stefin B)
sp|Q76LA0|CYTB_GORGO Cystatin B (Stefin B)
sp|P04080|CYTB_HUMAN Cystatin B (Liver thiol proteinase inhibitor) (CPI-B) (Stefin B)
Length = 98
Score = 63.9 bits (154), Expect = 1e-10
Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Frame = +2
Query: 29 EEKTILLTVKPQIEDQIGHSCSAFDILQLRSQVVAGTNYFAKVHIGDGKHIHIRVYQPLP 208
E + I V+ Q+E++ F + +SQVVAGTNYF KVH+GD +H+RV+Q LP
Sbjct: 15 ETQHIADQVRSQLEEKENKKFPVFKAVSFKSQVVAGTNYFIKVHVGDEDFVHLRVFQSLP 74
Query: 209 GQG-DLALHGLQ-EKLKEDVLEYF 274
+ L L Q K K D L YF
Sbjct: 75 HENKPLTLSNYQTNKAKHDELTYF 98
>sp|Q862Z5|CYTB_MACFU Cystatin B (Stefin B)
Length = 98
Score = 63.9 bits (154), Expect = 1e-10
Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Frame = +2
Query: 11 VRTPSEEEKTILLTVKPQIEDQIGHSCSAFDILQLRSQVVAGTNYFAKVHIGDGKHIHIR 190
V+ + E + I V+ Q+E++ F + +SQVVAGTNYF KVH+GD +H+R
Sbjct: 9 VQPATAETQDIADQVRSQLEEKENKKFPVFKAVSFKSQVVAGTNYFIKVHVGDEDFVHLR 68
Query: 191 VYQPLPGQG-DLALHGLQ-EKLKEDVLEYF 274
V++ LP + L L Q K K D L YF
Sbjct: 69 VFKSLPHENKPLTLSDYQTNKAKHDELSYF 98
>sp|P01041|CYTB_RAT Cystatin B (Liver thiol proteinase inhibitor) (Stefin B) (Cystatin
beta)
Length = 98
Score = 63.5 bits (153), Expect = 1e-10
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Frame = +2
Query: 29 EEKTILLTVKPQIEDQIGHSCSAFDILQLRSQVVAGTNYFAKVHIGDGKHIHIRVYQPLP 208
E + I VK Q+E++ F + R QVVAGTN+F KV +G+ K +H+RV++PLP
Sbjct: 15 ETQEIADKVKSQLEEKANQKFDVFKAISFRRQVVAGTNFFIKVDVGEEKCVHLRVFEPLP 74
Query: 209 GQG-DLALHGLQ-EKLKEDVLEYF 274
+ L L Q +K K D L YF
Sbjct: 75 HENKPLTLSSYQTDKEKHDELTYF 98
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,396,448
Number of Sequences: 369166
Number of extensions: 752687
Number of successful extensions: 1852
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1849
length of database: 68,354,980
effective HSP length: 89
effective length of database: 51,913,565
effective search space used: 1713147645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)