Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_007_E04
(225 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P34058|HS90B_RAT Heat shock protein HSP 90-beta (HSP 84) 149 3e-36
sp|Q04619|HS90B_CHICK Heat shock cognate protein HSP 90-beta 149 3e-36
sp|Q9GKX8|HS90B_HORSE Heat shock protein HSP 90-beta (HSP 84) 149 3e-36
sp|P08238|HS90B_HUMAN Heat shock protein HSP 90-beta (HSP 8... 149 3e-36
sp|P11501|HS90A_CHICK Heat shock protein HSP 90-alpha 148 4e-36
sp|O57521|HS90B_BRARE Heat shock protein HSP 90-beta 148 4e-36
sp|P11499|HS90B_MOUSE Heat shock protein HSP 90-beta (HSP 8... 147 7e-36
sp|P07900|HS90A_HUMAN Heat shock protein HSP 90-alpha (HSP 86) 147 1e-35
sp|O02705|HS90A_PIG Heat shock protein HSP 90-alpha (HSP 86) 147 1e-35
sp|Q9GKX7|HS90A_HORSE Heat shock protein HSP 90-alpha (HSP 86) 147 1e-35
>sp|P34058|HS90B_RAT Heat shock protein HSP 90-beta (HSP 84)
Length = 724
Score = 149 bits (375), Expect = 3e-36
Identities = 67/74 (90%), Positives = 72/74 (97%)
Frame = +3
Query: 3 KIKEKYIDEEELNKTKPIWTRNPDDVSQEDYAEFYKSLTNDWEDHLAVKHFSVEGQLEFR 182
KIKEKYID+EELNKTKPIWTRNPDD++QE+Y EFYKSLTNDWEDHLAVKHFSVEGQLEFR
Sbjct: 271 KIKEKYIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFR 330
Query: 183 ALLFCPKRAPFDLF 224
ALLF P+RAPFDLF
Sbjct: 331 ALLFIPRRAPFDLF 344
>sp|Q04619|HS90B_CHICK Heat shock cognate protein HSP 90-beta
Length = 725
Score = 149 bits (375), Expect = 3e-36
Identities = 67/74 (90%), Positives = 72/74 (97%)
Frame = +3
Query: 3 KIKEKYIDEEELNKTKPIWTRNPDDVSQEDYAEFYKSLTNDWEDHLAVKHFSVEGQLEFR 182
KIKEKYID+EELNKTKPIWTRNPDD++QE+Y EFYKSLTNDWEDHLAVKHFSVEGQLEFR
Sbjct: 272 KIKEKYIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFR 331
Query: 183 ALLFCPKRAPFDLF 224
ALLF P+RAPFDLF
Sbjct: 332 ALLFIPRRAPFDLF 345
>sp|Q9GKX8|HS90B_HORSE Heat shock protein HSP 90-beta (HSP 84)
Length = 724
Score = 149 bits (375), Expect = 3e-36
Identities = 67/74 (90%), Positives = 72/74 (97%)
Frame = +3
Query: 3 KIKEKYIDEEELNKTKPIWTRNPDDVSQEDYAEFYKSLTNDWEDHLAVKHFSVEGQLEFR 182
KIKEKYID+EELNKTKPIWTRNPDD++QE+Y EFYKSLTNDWEDHLAVKHFSVEGQLEFR
Sbjct: 271 KIKEKYIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFR 330
Query: 183 ALLFCPKRAPFDLF 224
ALLF P+RAPFDLF
Sbjct: 331 ALLFIPRRAPFDLF 344
>sp|P08238|HS90B_HUMAN Heat shock protein HSP 90-beta (HSP 84) (HSP 90)
Length = 724
Score = 149 bits (375), Expect = 3e-36
Identities = 67/74 (90%), Positives = 72/74 (97%)
Frame = +3
Query: 3 KIKEKYIDEEELNKTKPIWTRNPDDVSQEDYAEFYKSLTNDWEDHLAVKHFSVEGQLEFR 182
KIKEKYID+EELNKTKPIWTRNPDD++QE+Y EFYKSLTNDWEDHLAVKHFSVEGQLEFR
Sbjct: 271 KIKEKYIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFR 330
Query: 183 ALLFCPKRAPFDLF 224
ALLF P+RAPFDLF
Sbjct: 331 ALLFIPRRAPFDLF 344
>sp|P11501|HS90A_CHICK Heat shock protein HSP 90-alpha
Length = 728
Score = 148 bits (373), Expect = 4e-36
Identities = 67/74 (90%), Positives = 71/74 (95%)
Frame = +3
Query: 3 KIKEKYIDEEELNKTKPIWTRNPDDVSQEDYAEFYKSLTNDWEDHLAVKHFSVEGQLEFR 182
KIKEKYIDEEELNKTKPIWTRNPDD++ E+Y EFYKSLTNDWEDHLAVKHFSVEGQLEFR
Sbjct: 275 KIKEKYIDEEELNKTKPIWTRNPDDITNEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFR 334
Query: 183 ALLFCPKRAPFDLF 224
ALLF P+RAPFDLF
Sbjct: 335 ALLFVPRRAPFDLF 348
>sp|O57521|HS90B_BRARE Heat shock protein HSP 90-beta
Length = 725
Score = 148 bits (373), Expect = 4e-36
Identities = 67/74 (90%), Positives = 71/74 (95%)
Frame = +3
Query: 3 KIKEKYIDEEELNKTKPIWTRNPDDVSQEDYAEFYKSLTNDWEDHLAVKHFSVEGQLEFR 182
KIKEKYID+EELNKTKPIWTRNPDD+S E+Y EFYKSLTNDWEDHLAVKHFSVEGQLEFR
Sbjct: 270 KIKEKYIDQEELNKTKPIWTRNPDDISNEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFR 329
Query: 183 ALLFCPKRAPFDLF 224
ALLF P+RAPFDLF
Sbjct: 330 ALLFIPRRAPFDLF 343
>sp|P11499|HS90B_MOUSE Heat shock protein HSP 90-beta (HSP 84) (Tumor-specific
transplantation 84 kDa antigen) (TSTA)
Length = 724
Score = 147 bits (371), Expect = 7e-36
Identities = 66/74 (89%), Positives = 71/74 (95%)
Frame = +3
Query: 3 KIKEKYIDEEELNKTKPIWTRNPDDVSQEDYAEFYKSLTNDWEDHLAVKHFSVEGQLEFR 182
KIKEKYID+EELNKTKPIWTRNPDD++QE+Y EFYKSLTNDWEDHLAVKHFSVEGQLEFR
Sbjct: 271 KIKEKYIDQEELNKTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFR 330
Query: 183 ALLFCPKRAPFDLF 224
A LF P+RAPFDLF
Sbjct: 331 AFLFIPRRAPFDLF 344
>sp|P07900|HS90A_HUMAN Heat shock protein HSP 90-alpha (HSP 86)
Length = 732
Score = 147 bits (370), Expect = 1e-35
Identities = 66/74 (89%), Positives = 71/74 (95%)
Frame = +3
Query: 3 KIKEKYIDEEELNKTKPIWTRNPDDVSQEDYAEFYKSLTNDWEDHLAVKHFSVEGQLEFR 182
KIKEKYID+EELNKTKPIWTRNPDD++ E+Y EFYKSLTNDWEDHLAVKHFSVEGQLEFR
Sbjct: 279 KIKEKYIDQEELNKTKPIWTRNPDDITNEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFR 338
Query: 183 ALLFCPKRAPFDLF 224
ALLF P+RAPFDLF
Sbjct: 339 ALLFVPRRAPFDLF 352
>sp|O02705|HS90A_PIG Heat shock protein HSP 90-alpha (HSP 86)
Length = 733
Score = 147 bits (370), Expect = 1e-35
Identities = 66/74 (89%), Positives = 71/74 (95%)
Frame = +3
Query: 3 KIKEKYIDEEELNKTKPIWTRNPDDVSQEDYAEFYKSLTNDWEDHLAVKHFSVEGQLEFR 182
KIKEKYID+EELNKTKPIWTRNPDD++ E+Y EFYKSLTNDWEDHLAVKHFSVEGQLEFR
Sbjct: 280 KIKEKYIDQEELNKTKPIWTRNPDDITNEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFR 339
Query: 183 ALLFCPKRAPFDLF 224
ALLF P+RAPFDLF
Sbjct: 340 ALLFVPRRAPFDLF 353
>sp|Q9GKX7|HS90A_HORSE Heat shock protein HSP 90-alpha (HSP 86)
Length = 719
Score = 147 bits (370), Expect = 1e-35
Identities = 66/74 (89%), Positives = 71/74 (95%)
Frame = +3
Query: 3 KIKEKYIDEEELNKTKPIWTRNPDDVSQEDYAEFYKSLTNDWEDHLAVKHFSVEGQLEFR 182
KIKEKYID+EELNKTKPIWTRNPDD++ E+Y EFYKSLTNDWEDHLAVKHFSVEGQLEFR
Sbjct: 269 KIKEKYIDQEELNKTKPIWTRNPDDITNEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFR 328
Query: 183 ALLFCPKRAPFDLF 224
ALLF P+RAPFDLF
Sbjct: 329 ALLFVPRRAPFDLF 342
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,830,333
Number of Sequences: 369166
Number of extensions: 305822
Number of successful extensions: 1184
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1181
length of database: 68,354,980
effective HSP length: 46
effective length of database: 59,857,170
effective search space used: 1676000760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)