Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_007_D12
(727 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q99615|DNJC7_HUMAN DnaJ homolog subfamily C member 7 (Te... 151 2e-36
sp|Q9QYI3|DNJC7_MOUSE DnaJ homolog subfamily C member 7 (Te... 148 2e-35
sp|Q8RH03|DNAJ_FUSNN Chaperone protein dnaJ 84 4e-16
sp|Q70WY6|DNAJ_FUSNP Chaperone protein dnaJ 82 1e-15
sp|P47265|DNAJ_MYCGE Chaperone protein dnaJ 80 4e-15
sp|Q9R0T3|DNJC3_RAT DnaJ homolog subfamily C member 3 (Inte... 80 7e-15
sp|Q892R1|DNAJ_CLOTE Chaperone protein dnaJ 79 9e-15
sp|Q91YW3|DNJC3_MOUSE DnaJ homolog subfamily C member 3 (In... 77 5e-14
sp|Q13217|DNJC3_HUMAN DnaJ homolog subfamily C member 3 (In... 77 5e-14
sp|Q8EUM4|DNAJ_MYCPE Chaperone protein dnaJ 77 5e-14
>sp|Q99615|DNJC7_HUMAN DnaJ homolog subfamily C member 7 (Tetratricopeptide repeat protein
2) (TPR repeat protein 2)
Length = 494
Score = 151 bits (381), Expect = 2e-36
Identities = 81/179 (45%), Positives = 106/179 (59%)
Frame = +1
Query: 58 EAFNDCNRALELDPQYIKAMGRRINCLMGLDRYXXXXXXXXXLQKKHPSDENSKLYKQAK 237
+A DC A++LD YIKA RR C M ++Y + + + E+ +L K A+
Sbjct: 312 DAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQTEKTKEHKQLLKNAQ 371
Query: 238 LSLKRSKQLDPYTVLGVPKSASEAEIKKGYRKRALLHHPDRHSHADEATRHAEEQKFKEV 417
L LK+SK+ D Y +LGV K+ASE EIKK YRKRAL+HHPDRHS A + EE+KFKEV
Sbjct: 372 LELKKSKRKDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEVQKEEEKKFKEV 431
Query: 418 NTAYSVLSDPRKKQMYDSGADIDEVLXXXXXXXXXXXXXXDPMEVFQAFFSSGCGNAGF 594
A+++LSDP+KK YDSG D+DE DP +F+AFF G GF
Sbjct: 432 GEAFTILSDPKKKTRYDSGQDLDE--------EGMNMGDFDPNNIFKAFFG---GPGGF 479
>sp|Q9QYI3|DNJC7_MOUSE DnaJ homolog subfamily C member 7 (Tetratricopeptide repeat protein
2) (TPR repeat protein 2) (MDj11)
Length = 494
Score = 148 bits (373), Expect = 2e-35
Identities = 82/191 (42%), Positives = 111/191 (58%), Gaps = 4/191 (2%)
Frame = +1
Query: 55 QEAFNDCNRALELDPQYIKAMGRRINCLMGLDRYXXXXXXXXXLQKKHPSDENSKLYKQA 234
++A DC A++LD YIKA RR C M +++ + + + E+ +L K A
Sbjct: 311 EDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQFEEAVRDYEKVYQTEKTKEHKQLLKNA 370
Query: 235 KLSLKRSKQLDPYTVLGVPKSASEAEIKKGYRKRALLHHPDRHSHADEATRHAEEQKFKE 414
+L LK+SK+ D Y +LGV K+ASE EIKK YRKRAL+HHPDRHS A + EE+KFKE
Sbjct: 371 QLELKKSKRKDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEVQKEEEKKFKE 430
Query: 415 VNTAYSVLSDPRKKQMYDSGADIDEVLXXXXXXXXXXXXXXDPMEVFQAFFSSGCGNAGF 594
V A+++LSDP+KK YDSG D+DE D +F+AFF G G F
Sbjct: 431 VGEAFTILSDPKKKTRYDSGQDLDE--------EGMNMGDFDANNIFKAFF-GGPGGFSF 481
Query: 595 KM----NFHHQ 615
+ NF+ Q
Sbjct: 482 EASGPGNFYFQ 492
>sp|Q8RH03|DNAJ_FUSNN Chaperone protein dnaJ
Length = 392
Score = 84.0 bits (206), Expect = 4e-16
Identities = 38/68 (55%), Positives = 51/68 (75%)
Frame = +1
Query: 265 DPYTVLGVPKSASEAEIKKGYRKRALLHHPDRHSHADEATRHAEEQKFKEVNTAYSVLSD 444
D Y VLG+ KSASE +IKK YRK A+ +HPD+ ++A +A + E+KFKE+N AY +LSD
Sbjct: 5 DYYEVLGIDKSASENDIKKAYRKAAMKYHPDKFANASDAEKKDAEEKFKEINEAYQILSD 64
Query: 445 PRKKQMYD 468
+KKQ YD
Sbjct: 65 SQKKQQYD 72
>sp|Q70WY6|DNAJ_FUSNP Chaperone protein dnaJ
Length = 394
Score = 82.4 bits (202), Expect = 1e-15
Identities = 39/68 (57%), Positives = 50/68 (73%)
Frame = +1
Query: 265 DPYTVLGVPKSASEAEIKKGYRKRALLHHPDRHSHADEATRHAEEQKFKEVNTAYSVLSD 444
D Y VLGV K+ASE +IKK YRK A+ +HPD+ ++A +A + E+KFKE+N AY VLSD
Sbjct: 5 DYYEVLGVDKNASENDIKKAYRKAAMKYHPDKFANATDAEKKDAEEKFKEINEAYQVLSD 64
Query: 445 PRKKQMYD 468
KKQ YD
Sbjct: 65 NEKKQQYD 72
>sp|P47265|DNAJ_MYCGE Chaperone protein dnaJ
Length = 389
Score = 80.5 bits (197), Expect = 4e-15
Identities = 36/68 (52%), Positives = 49/68 (72%)
Frame = +1
Query: 265 DPYTVLGVPKSASEAEIKKGYRKRALLHHPDRHSHADEATRHAEEQKFKEVNTAYSVLSD 444
D Y VLG+ K+AS +IK+ +RK A+ +HPDRH +E T+ E+KFKEVN AY VLSD
Sbjct: 7 DYYEVLGISKNASSQDIKRAFRKLAMQYHPDRHKAENETTQKQNEEKFKEVNEAYEVLSD 66
Query: 445 PRKKQMYD 468
K+++YD
Sbjct: 67 EEKRKLYD 74
>sp|Q9R0T3|DNJC3_RAT DnaJ homolog subfamily C member 3 (Interferon-induced,
double-stranded RNA-activated protein kinase inhibitor)
(Protein kinase inhibitor p58) (Protein kinase inhibitor
of 58 kDa)
Length = 504
Score = 79.7 bits (195), Expect = 7e-15
Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 1/189 (0%)
Frame = +1
Query: 46 ERWQEAFNDCNRALELDPQYIKAMGRRINCLMGLDRYXXXXXXXXXLQKKHPSDENSKL- 222
E+ EA C+ L+L+P + A+ R + + Y Q+++ +D+ +
Sbjct: 320 EKPVEAIKICSEVLQLEPDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEQNENDQQIREG 379
Query: 223 YKQAKLSLKRSKQLDPYTVLGVPKSASEAEIKKGYRKRALLHHPDRHSHADEATRHAEEQ 402
++A+ LK+S++ D Y +LGV ++A + EI K YRK AL HPD +E + E+
Sbjct: 380 LEKAQRLLKQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQSEEE--KKKAEK 437
Query: 403 KFKEVNTAYSVLSDPRKKQMYDSGADIDEVLXXXXXXXXXXXXXXDPMEVFQAFFSSGCG 582
KF ++ A VLSDP ++ +D G D + D + F F S G
Sbjct: 438 KFIDIAAAKEVLSDPEMRRKFDDGEDPLDAETQQGGGSNPFHRSWDSWQGFNPFSSGG-- 495
Query: 583 NAGFKMNFH 609
F+ FH
Sbjct: 496 --PFRFKFH 502
>sp|Q892R1|DNAJ_CLOTE Chaperone protein dnaJ
Length = 375
Score = 79.3 bits (194), Expect = 9e-15
Identities = 45/109 (41%), Positives = 61/109 (55%)
Frame = +1
Query: 265 DPYTVLGVPKSASEAEIKKGYRKRALLHHPDRHSHADEATRHAEEQKFKEVNTAYSVLSD 444
D Y VLGV K A++AEIKK +RK AL +HPD+++ EA E++FKE+N AY VLSD
Sbjct: 5 DFYEVLGVEKGANDAEIKKAFRKLALKYHPDKNAGNKEA-----EERFKEINEAYQVLSD 59
Query: 445 PRKKQMYDSGADIDEVLXXXXXXXXXXXXXXDPMEVFQAFFSSGCGNAG 591
P+K+ YD D D ++F++FF G G G
Sbjct: 60 PQKRAQYDQFGTAD---FNGGGAGFSGFEDFDLGDIFESFFGGGFGGFG 105
>sp|Q91YW3|DNJC3_MOUSE DnaJ homolog subfamily C member 3 (Interferon-induced,
double-stranded RNA-activated protein kinase inhibitor)
(Protein kinase inhibitor p58) (Protein kinase inhibitor
of 58 kDa)
Length = 504
Score = 77.0 bits (188), Expect = 5e-14
Identities = 45/146 (30%), Positives = 78/146 (53%), Gaps = 1/146 (0%)
Frame = +1
Query: 46 ERWQEAFNDCNRALELDPQYIKAMGRRINCLMGLDRYXXXXXXXXXLQKKHPSDENSKL- 222
E+ EA C+ L+++P + A+ R + + Y Q+ + +D+ +
Sbjct: 320 EKPVEAIRICSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNENDQQIREG 379
Query: 223 YKQAKLSLKRSKQLDPYTVLGVPKSASEAEIKKGYRKRALLHHPDRHSHADEATRHAEEQ 402
++A+ LK+S++ D Y +LGV ++A + EI K YRK AL HPD + +E + E+
Sbjct: 380 LEKAQRLLKQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEE--KKKAEK 437
Query: 403 KFKEVNTAYSVLSDPRKKQMYDSGAD 480
KF ++ A VLSDP ++ +D G D
Sbjct: 438 KFIDIAAAKEVLSDPEMRKKFDDGED 463
>sp|Q13217|DNJC3_HUMAN DnaJ homolog subfamily C member 3 (Interferon-induced,
double-stranded RNA-activated protein kinase inhibitor)
(Protein kinase inhibitor p58) (Protein kinase inhibitor
of 58 kDa)
Length = 504
Score = 77.0 bits (188), Expect = 5e-14
Identities = 45/146 (30%), Positives = 78/146 (53%), Gaps = 1/146 (0%)
Frame = +1
Query: 46 ERWQEAFNDCNRALELDPQYIKAMGRRINCLMGLDRYXXXXXXXXXLQKKHPSDENSKL- 222
E+ EA C+ L+++P + A+ R + + Y Q+ + +D+ +
Sbjct: 320 EKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREG 379
Query: 223 YKQAKLSLKRSKQLDPYTVLGVPKSASEAEIKKGYRKRALLHHPDRHSHADEATRHAEEQ 402
++A+ LK+S++ D Y +LGV ++A + EI K YRK AL HPD + +E + E+
Sbjct: 380 LEKAQRLLKQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEE--KKKAEK 437
Query: 403 KFKEVNTAYSVLSDPRKKQMYDSGAD 480
KF ++ A VLSDP ++ +D G D
Sbjct: 438 KFIDIAAAKEVLSDPEMRKKFDDGED 463
>sp|Q8EUM4|DNAJ_MYCPE Chaperone protein dnaJ
Length = 388
Score = 77.0 bits (188), Expect = 5e-14
Identities = 48/123 (39%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Frame = +1
Query: 253 SKQLDPYTVLGVPKSASEAEIKKGYRKRALLHHPDRHSHADEATRHAEEQKFKEVNTAYS 432
S + D Y VLGV K A++ +IK +RK+A+ +HPDR+ D E+KFKEVN AY
Sbjct: 2 SSKRDYYEVLGVSKDATDDQIKSAFRKKAMQYHPDRNKEPD------AEEKFKEVNQAYE 55
Query: 433 VLSDPRKKQMYD----SGADIDEVLXXXXXXXXXXXXXXDPMEVFQAFFSSG-CGNAGFK 597
VLSDP K+ YD G D DP ++F FF G G A F+
Sbjct: 56 VLSDPDKRANYDRFGHEGVD----------GQFGGGAGFDPFDIFNQFFGGGRGGGAHFE 105
Query: 598 MNF 606
+F
Sbjct: 106 QSF 108
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,387,363
Number of Sequences: 369166
Number of extensions: 1245939
Number of successful extensions: 4643
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4303
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 6510836890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)