Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_007_C16
(269 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P04069|CBPB_ASTFL Carboxypeptidase B 47 1e-05
sp|Q96IY4|CBPB2_HUMAN Carboxypeptidase B2 precursor (Carbox... 40 0.002
sp|P00730|CBPA1_BOVIN Carboxypeptidase A1 precursor 39 0.005
sp|Q9JHH6|CBPB2_MOUSE Carboxypeptidase B2 precursor (Carbox... 38 0.006
sp|Q7TPZ8|CBPA1_MOUSE Carboxypeptidase A1 precursor 38 0.008
sp|P00731|CBPA1_RAT Carboxypeptidase A1 precursor 38 0.008
sp|Q6P8K8|CBPA4_MOUSE Carboxypeptidase A4 precursor 37 0.019
sp|Q9EQV9|CBPB2_RAT Carboxypeptidase B2 precursor (Carboxyp... 36 0.024
sp|P15085|CBPA1_HUMAN Carboxypeptidase A1 precursor 35 0.054
sp|O02350|CBPA_ANOGA Zinc carboxypeptidase A precursor 34 0.093
>sp|P04069|CBPB_ASTFL Carboxypeptidase B
Length = 303
Score = 47.4 bits (111), Expect = 1e-05
Identities = 29/67 (43%), Positives = 37/67 (55%)
Frame = +1
Query: 13 GGAYDWIKTKTKVKYAYTLELRPSREYTTGLAGFLAPISYISRSGEEVYAGLLATVQAMT 192
GG+ DW K + VKYAYT+ELR TG GFL P + I +GEE + G V+ +
Sbjct: 245 GGSDDWAKGEGGVKYAYTIELR-----DTGNYGFLLPENQIIPTGEETFEG----VKVVA 295
Query: 193 N*TKSKY 213
N K Y
Sbjct: 296 NFVKDTY 302
>sp|Q96IY4|CBPB2_HUMAN Carboxypeptidase B2 precursor (Carboxypeptidase U)
(Thrombin-activatable fibrinolysis inhibitor) (TAFI)
(Plasma carboxypeptidase B) (pCPB)
Length = 423
Score = 39.7 bits (91), Expect = 0.002
Identities = 23/55 (41%), Positives = 30/55 (54%)
Frame = +1
Query: 4 LLPGGAYDWIKTKTKVKYAYTLELRPSREYTTGLAGFLAPISYISRSGEEVYAGL 168
L PGG DWI +KY++T+ELR TG GFL P YI + E +A +
Sbjct: 364 LAPGGGDDWIYD-LGIKYSFTIELR-----DTGTYGFLLPERYIKPTCREAFAAV 412
>sp|P00730|CBPA1_BOVIN Carboxypeptidase A1 precursor
Length = 419
Score = 38.5 bits (88), Expect = 0.005
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1
Query: 13 GGAYDWIKTKTKVKYAYTLELRPSREYTTGLAGFLAPISYISRSGEEVYAGLLATVQAMT 192
GG+ DW + +KY++T ELR TG GFL P S I + +E + G+L ++
Sbjct: 362 GGSIDWSYNQG-IKYSFTFELR-----DTGRYGFLLPASQIIPTAQETWLGVLTIMEHTL 415
Query: 193 N 195
N
Sbjct: 416 N 416
>sp|Q9JHH6|CBPB2_MOUSE Carboxypeptidase B2 precursor (Carboxypeptidase U)
(Thrombin-activatable fibrinolysis inhibitor) (TAFI)
(Carboxypeptidase R) (CPR)
Length = 422
Score = 38.1 bits (87), Expect = 0.006
Identities = 23/55 (41%), Positives = 30/55 (54%)
Frame = +1
Query: 4 LLPGGAYDWIKTKTKVKYAYTLELRPSREYTTGLAGFLAPISYISRSGEEVYAGL 168
L PGG+ DWI +KY++T+ELR TG GFL P YI + E A +
Sbjct: 363 LAPGGSDDWIYD-LGIKYSFTIELR-----DTGRYGFLLPERYIKPTCAEALAAI 411
>sp|Q7TPZ8|CBPA1_MOUSE Carboxypeptidase A1 precursor
Length = 419
Score = 37.7 bits (86), Expect = 0.008
Identities = 22/53 (41%), Positives = 29/53 (54%)
Frame = +1
Query: 13 GGAYDWIKTKTKVKYAYTLELRPSREYTTGLAGFLAPISYISRSGEEVYAGLL 171
G DW ++ +KY++T ELR TGL GFL P S I + EE + LL
Sbjct: 362 GSTIDWTYSQG-IKYSFTFELRD-----TGLRGFLLPASQIIPTAEETWLALL 408
>sp|P00731|CBPA1_RAT Carboxypeptidase A1 precursor
Length = 419
Score = 37.7 bits (86), Expect = 0.008
Identities = 22/53 (41%), Positives = 29/53 (54%)
Frame = +1
Query: 13 GGAYDWIKTKTKVKYAYTLELRPSREYTTGLAGFLAPISYISRSGEEVYAGLL 171
G DW ++ +KY++T ELR TGL GFL P S I + EE + LL
Sbjct: 362 GSTIDWTYSQG-IKYSFTFELRD-----TGLRGFLLPASQIIPTAEETWLALL 408
>sp|Q6P8K8|CBPA4_MOUSE Carboxypeptidase A4 precursor
Length = 420
Score = 36.6 bits (83), Expect = 0.019
Identities = 22/52 (42%), Positives = 27/52 (51%)
Frame = +1
Query: 13 GGAYDWIKTKTKVKYAYTLELRPSREYTTGLAGFLAPISYISRSGEEVYAGL 168
G + DW +KYA+T ELR TG GFL P S I + EE + GL
Sbjct: 363 GSSVDWAYDNG-IKYAFTFELR-----DTGYYGFLLPASQIIPTAEETWLGL 408
>sp|Q9EQV9|CBPB2_RAT Carboxypeptidase B2 precursor (Carboxypeptidase U)
(Thrombin-activatable fibrinolysis inhibitor) (TAFI)
(Carboxypeptidase R) (CPR)
Length = 422
Score = 36.2 bits (82), Expect = 0.024
Identities = 22/55 (40%), Positives = 30/55 (54%)
Frame = +1
Query: 4 LLPGGAYDWIKTKTKVKYAYTLELRPSREYTTGLAGFLAPISYISRSGEEVYAGL 168
L PGG+ DWI +KY++T+ELR TG GFL P +I + E A +
Sbjct: 363 LAPGGSDDWIYD-LGIKYSFTIELR-----DTGRYGFLLPERFIKPTCAEALAAV 411
>sp|P15085|CBPA1_HUMAN Carboxypeptidase A1 precursor
Length = 419
Score = 35.0 bits (79), Expect = 0.054
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +1
Query: 13 GGAYDWIKTKTKVKYAYTLELRPSREYTTGLAGFLAPISYISRSGEEVYAGLLATVQAMT 192
G DW ++ +KY++T ELR TG GFL P S I + +E + LL ++
Sbjct: 362 GSTIDWTYSQG-IKYSFTFELR-----DTGRYGFLLPASQIIPTAKETWLALLTIMEHTL 415
Query: 193 N 195
N
Sbjct: 416 N 416
>sp|O02350|CBPA_ANOGA Zinc carboxypeptidase A precursor
Length = 433
Score = 34.3 bits (77), Expect = 0.093
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +1
Query: 13 GGAYDWIKTKTKVKYAYTLELRPSREYTTGLAGFLAPISYISRSGEEVYAGLLATVQ 183
G + DW VK AYT ELRP + GF+ P + I +GEE L+ ++
Sbjct: 368 GSSVDWSYGAQDVKIAYTYELRPDGD---AWNGFVLPPNEIVPTGEETLDSLITLLE 421
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,670,379
Number of Sequences: 369166
Number of extensions: 441380
Number of successful extensions: 990
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 987
length of database: 68,354,980
effective HSP length: 59
effective length of database: 57,455,615
effective search space used: 1723668450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)