Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_007_A22
(677 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 224 1e-58
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 224 1e-58
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 224 1e-58
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 221 1e-57
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 218 9e-57
sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein 218 9e-57
sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (... 218 2e-56
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 217 2e-56
sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein 217 3e-56
sp|P14659|HSP72_RAT Heat shock-related 70 kDa protein 2 (He... 216 3e-56
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 224 bits (572), Expect = 1e-58
Identities = 113/190 (59%), Positives = 132/190 (69%)
Frame = +1
Query: 25 GNLNYVGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIE 204
G GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKGRLSK+DIE
Sbjct: 457 GKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIE 516
Query: 205 RMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQE 384
RMV ++++KNSLESYA+ MKATVEDEKL+ KI++ D++ I+DKC E
Sbjct: 517 RMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNE 576
Query: 385 AIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXX 564
I WLDKNQ A K+EF++ KELEKVCNPI+TK+YQ
Sbjct: 577 IINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGA 636
Query: 565 KQGPTVEEVD 594
GPT+EEVD
Sbjct: 637 SSGPTIEEVD 646
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 224 bits (572), Expect = 1e-58
Identities = 113/190 (59%), Positives = 132/190 (69%)
Frame = +1
Query: 25 GNLNYVGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIE 204
G GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKGRLSK+DIE
Sbjct: 457 GKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIE 516
Query: 205 RMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQE 384
RMV ++++KNSLESYA+ MKATVEDEKL+ KI++ D++ I+DKC E
Sbjct: 517 RMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNE 576
Query: 385 AIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXX 564
I WLDKNQ A K+EF++ KELEKVCNPI+TK+YQ
Sbjct: 577 IISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGA 636
Query: 565 KQGPTVEEVD 594
GPT+EEVD
Sbjct: 637 SSGPTIEEVD 646
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 224 bits (572), Expect = 1e-58
Identities = 113/190 (59%), Positives = 132/190 (69%)
Frame = +1
Query: 25 GNLNYVGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIE 204
G GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKGRLSK+DIE
Sbjct: 457 GKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIE 516
Query: 205 RMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQE 384
RMV ++++KNSLESYA+ MKATVEDEKL+ KI++ D++ I+DKC E
Sbjct: 517 RMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNE 576
Query: 385 AIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXX 564
I WLDKNQ A K+EF++ KELEKVCNPI+TK+YQ
Sbjct: 577 IISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGA 636
Query: 565 KQGPTVEEVD 594
GPT+EEVD
Sbjct: 637 SSGPTIEEVD 646
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 221 bits (563), Expect = 1e-57
Identities = 113/193 (58%), Positives = 132/193 (68%), Gaps = 3/193 (1%)
Frame = +1
Query: 25 GNLNYVGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIE 204
G GIPPAPRGVPQIEVTFDIDANGI+NVSAV+K TGKENKITITNDKGRLSK+DIE
Sbjct: 457 GKFELTGIPPAPRGVPQIEVTFDIDANGIMNVSAVDKSTGKENKITITNDKGRLSKEDIE 516
Query: 205 RMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQE 384
RMV +++AKN LESYA+ MK+TVEDEKLK KIS+ D++ I+DKC E
Sbjct: 517 RMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKLKGKISDEDKQKILDKCNE 576
Query: 385 AIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQ---XXXXXXXXXXXXXXXXXXXXX 555
IGWLDKNQ A ++EF++ KELEKVCNPI+TK+YQ
Sbjct: 577 VIGWLDKNQTAEREEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPEGMPGGFPGAGAAP 636
Query: 556 XXXKQGPTVEEVD 594
GPT+EEVD
Sbjct: 637 GGGSSGPTIEEVD 649
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 218 bits (556), Expect = 9e-57
Identities = 111/195 (56%), Positives = 132/195 (67%), Gaps = 5/195 (2%)
Frame = +1
Query: 25 GNLNYVGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIE 204
G GIPPAPRGVPQIEVTFDIDANGI+NVSA +K TGKENKITITNDKGRLSK+DIE
Sbjct: 457 GKFELTGIPPAPRGVPQIEVTFDIDANGIMNVSAADKSTGKENKITITNDKGRLSKEDIE 516
Query: 205 RMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQE 384
RMV ++++KNSLESYA+ MK+TVEDEKL+ KIS+ D+ I++KC E
Sbjct: 517 RMVQEAEKYKCEDDVQRDKVSSKNSLESYAFNMKSTVEDEKLQGKISDEDKTKILEKCNE 576
Query: 385 AIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQ-----XXXXXXXXXXXXXXXXXXX 549
IGWLDKNQ A K+E+++H KELEKVCNPI+TK+YQ
Sbjct: 577 VIGWLDKNQTAEKEEYEHHQKELEKVCNPIITKLYQGAGGMPGGMPEGMAGGFPGAGGAA 636
Query: 550 XXXXXKQGPTVEEVD 594
GPT+EEVD
Sbjct: 637 PGGGGSSGPTIEEVD 651
>sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein
Length = 649
Score = 218 bits (556), Expect = 9e-57
Identities = 112/193 (58%), Positives = 130/193 (67%), Gaps = 3/193 (1%)
Frame = +1
Query: 25 GNLNYVGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIE 204
G GIPPAPRGVPQIEVTFDIDANGI+NVSAV+K TGKENKITITNDKGRLSK+DIE
Sbjct: 457 GKFELTGIPPAPRGVPQIEVTFDIDANGIMNVSAVDKSTGKENKITITNDKGRLSKEDIE 516
Query: 205 RMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQE 384
RMV +++AKN LESYA+ MK+TVEDEKLK KIS+ D+ I+DKC E
Sbjct: 517 RMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKLKGKISDEDKHKILDKCNE 576
Query: 385 AIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQ---XXXXXXXXXXXXXXXXXXXXX 555
I WLDKNQ A KDE+++ K+LEKVCNPI+TK+YQ
Sbjct: 577 VISWLDKNQTAEKDEYEHQQKDLEKVCNPIITKLYQSDGGMPGGMPDGMPGGFQELGAAP 636
Query: 556 XXXKQGPTVEEVD 594
GPT+EEVD
Sbjct: 637 GGGSSGPTIEEVD 649
>sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (Heat shock 70 kDa protein 2)
Length = 639
Score = 218 bits (554), Expect = 2e-56
Identities = 111/190 (58%), Positives = 130/190 (68%)
Frame = +1
Query: 25 GNLNYVGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIE 204
G + GIPPAPRGVPQIEVTFDIDANGILNV+A +K TGKENKITITNDKGRLSKDDI+
Sbjct: 460 GKFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAADKSTGKENKITITNDKGRLSKDDID 519
Query: 205 RMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQE 384
RMV R+AAKN+LESY Y +K TVEDEKL+ KISE D+ I+DKCQE
Sbjct: 520 RMVQEAERYKSEDEANRDRVAAKNALESYTYNIKQTVEDEKLRGKISEQDKNKILDKCQE 579
Query: 385 AIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXX 564
I WLD+NQ A KDE+++ KELE+VCNPI++K+YQ
Sbjct: 580 VINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ----------GGPGGGSGGGGSGA 629
Query: 565 KQGPTVEEVD 594
GPT+EEVD
Sbjct: 630 SGGPTIEEVD 639
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 217 bits (553), Expect = 2e-56
Identities = 112/194 (57%), Positives = 132/194 (68%), Gaps = 4/194 (2%)
Frame = +1
Query: 25 GNLNYVGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIE 204
G GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKGRLSK+DIE
Sbjct: 457 GKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIE 516
Query: 205 RMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQE 384
RMV ++++KNSL+SYA+ MKATVEDEKL+ KI++ D++ I+DKC E
Sbjct: 517 RMVQEAEKYKAEDEKQRDKVSSKNSLKSYAFNMKATVEDEKLQGKINDEDKQKILDKCNE 576
Query: 385 AIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQ----XXXXXXXXXXXXXXXXXXXX 552
I WLDKNQ A K+EF++ KELEKVCNPI+TK+YQ
Sbjct: 577 IINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGMPGGFPGGGAPP 636
Query: 553 XXXXKQGPTVEEVD 594
GPT+EEVD
Sbjct: 637 SGGASSGPTIEEVD 650
>sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein
Length = 644
Score = 217 bits (552), Expect = 3e-56
Identities = 114/190 (60%), Positives = 128/190 (67%)
Frame = +1
Query: 25 GNLNYVGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIE 204
G GIPPAPRGVPQIEVTFDIDANGILNVSA +K TGK+NKITITNDKGRLSKD+IE
Sbjct: 456 GKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAQDKSTGKQNKITITNDKGRLSKDEIE 515
Query: 205 RMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQE 384
RMV RIAAKN+LESYA+ MK T+EDEKLKDKISE D+K I +KC E
Sbjct: 516 RMVQEAEKYKADDEAQKDRIAAKNALESYAFNMKQTIEDEKLKDKISEEDKKKIQEKCDE 575
Query: 385 AIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXX 564
+ WLD NQ A KDEF++ KELE VCNPI+TK+YQ
Sbjct: 576 TVRWLDGNQTAEKDEFEHRQKELESVCNPIITKLYQSAGGMPGGMPGGMPGGAPGAGSTG 635
Query: 565 KQGPTVEEVD 594
GPT+EEVD
Sbjct: 636 -GGPTIEEVD 644
>sp|P14659|HSP72_RAT Heat shock-related 70 kDa protein 2 (Heat shock protein 70.2)
(Testis-specific heat shock protein-related) (HST)
Length = 633
Score = 216 bits (551), Expect = 3e-56
Identities = 110/190 (57%), Positives = 130/190 (68%)
Frame = +1
Query: 25 GNLNYVGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIE 204
G + GIPPAPRGVPQIEVTFDIDANGILNV+A +K TGKENKITITNDKGRLSKDDI+
Sbjct: 460 GKFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAADKSTGKENKITITNDKGRLSKDDID 519
Query: 205 RMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQE 384
RMV R+AAKN++ESY Y +K TVEDEKL+ KISE D+ I+DKCQE
Sbjct: 520 RMVQEADGYKSEDEANRDRVAAKNAVESYTYNIKQTVEDEKLRGKISEQDKNKILDKCQE 579
Query: 385 AIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXX 564
I WLD+NQ A KDE+++ KELE+VCNPI++K+YQ
Sbjct: 580 VINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ----------------GGPGGGGS 623
Query: 565 KQGPTVEEVD 594
GPT+EEVD
Sbjct: 624 SGGPTIEEVD 633
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,755,541
Number of Sequences: 369166
Number of extensions: 722455
Number of successful extensions: 3192
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3006
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 5733423530
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)