Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_007_A16
(872 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P52209|6PGD_HUMAN 6-phosphogluconate dehydrogenase, deca... 337 3e-92
sp|P00349|6PGD_SHEEP 6-phosphogluconate dehydrogenase, deca... 336 4e-92
sp|Q9DCD0|6PGD_MOUSE 6-phosphogluconate dehydrogenase, deca... 333 4e-91
sp|P41570|6PGD_CERCA 6-phosphogluconate dehydrogenase, deca... 330 2e-90
sp|O60037|6PGD_CUNEL 6-phosphogluconate dehydrogenase, deca... 324 2e-88
sp|P41572|6PGD_DROME 6-phosphogluconate dehydrogenase, deca... 323 3e-88
sp|P41573|6PGD_DROSI 6-phosphogluconate dehydrogenase, deca... 322 1e-87
sp|Q17761|6PGD_CAEEL 6-phosphogluconate dehydrogenase, deca... 319 7e-87
sp|P38720|6PGD1_YEAST 6-phosphogluconate dehydrogenase, dec... 301 2e-81
sp|P14332|6PGD_PIG 6-phosphogluconate dehydrogenase, decarb... 300 3e-81
>sp|P52209|6PGD_HUMAN 6-phosphogluconate dehydrogenase, decarboxylating
Length = 483
Score = 337 bits (864), Expect = 3e-92
Identities = 163/276 (59%), Positives = 204/276 (73%)
Frame = -3
Query: 870 LLEMGNEEISNAFADWNNSELESFLIEITSSITKFKANDGTYLVEDIYDSAGQKGTGKWT 691
+L M +E++ AF DWN +EL+SFLIEIT++I KF+ DG +L+ I DSAGQKGTGKWT
Sbjct: 208 VLGMAQDEMAQAFEDWNKTELDSFLIEITANILKFQDTDGKHLLPKIRDSAGQKGTGKWT 267
Query: 690 AITALDFGVPVTLIAESVFARSLSALKSLRVEASKRFPSNNLLNFTGDKTKFLNQIKYAL 511
AI+AL++GVPVTLI E+VFAR LS+LK R++ASK+ F GDK FL I+ AL
Sbjct: 268 AISALEYGVPVTLIGEAVFARCLSSLKDERIQASKKLKGPQKFQFDGDKKSFLEDIRKAL 327
Query: 510 YASKIISYTQGFMMMKSASHEFKWNLDLGKIALMWRGGCIIRSRFLQNIKDAYEKNKNLS 331
YASKIISY QGFM+++ A+ EF W L+ G IALMWRGGCIIRS FL IKDA+++N L
Sbjct: 328 YASKIISYAQGFMLLRQAATEFGWTLNYGGIALMWRGGCIIRSVFLGKIKDAFDRNPELQ 387
Query: 330 ILLFDKFFQSEILKCQESWRHVVANAALHGIPTPAFSCALAFYDGLRTEKLPANLIQAQR 151
LL D FF+S + CQ+SWR V+ GIP P F+ AL+FYDG R E LPA+LIQAQR
Sbjct: 388 NLLLDDFFKSAVENCQDSWRRAVSTGVQAGIPMPCFTTALSFYDGYRHEMLPASLIQAQR 447
Query: 150 DLFGAHQYQLLDHPGTYEHTDWTGHGGNAAASTYQA 43
D FGAH Y+LL PG + HT+WTGHGG ++S+Y A
Sbjct: 448 DYFGAHTYELLAKPGQFIHTNWTGHGGTVSSSSYNA 483
>sp|P00349|6PGD_SHEEP 6-phosphogluconate dehydrogenase, decarboxylating
Length = 483
Score = 336 bits (862), Expect = 4e-92
Identities = 162/276 (58%), Positives = 207/276 (75%)
Frame = -3
Query: 870 LLEMGNEEISNAFADWNNSELESFLIEITSSITKFKANDGTYLVEDIYDSAGQKGTGKWT 691
+L +G++E++ AF +WN +EL+SFLIEIT+SI KF+ DG +L+ I DSAGQKGTGKWT
Sbjct: 208 VLGLGHKEMAKAFEEWNKTELDSFLIEITASILKFQDADGKHLLPKIRDSAGQKGTGKWT 267
Query: 690 AITALDFGVPVTLIAESVFARSLSALKSLRVEASKRFPSNNLLNFTGDKTKFLNQIKYAL 511
AI+AL++GVPVTLI E+VFAR LS+LK R++ASK+ + F GDK FL I+ AL
Sbjct: 268 AISALEYGVPVTLIGEAVFARCLSSLKDERIQASKKLKGPQNIPFEGDKKSFLEDIRKAL 327
Query: 510 YASKIISYTQGFMMMKSASHEFKWNLDLGKIALMWRGGCIIRSRFLQNIKDAYEKNKNLS 331
YASKIISY QGFM+++ A+ EF W L+ G IALMWRGGCIIRS FL IKDA+++N L
Sbjct: 328 YASKIISYAQGFMLLRQAATEFGWTLNYGGIALMWRGGCIIRSVFLGKIKDAFDRNPGLQ 387
Query: 330 ILLFDKFFQSEILKCQESWRHVVANAALHGIPTPAFSCALAFYDGLRTEKLPANLIQAQR 151
LL D FF+S + CQ+SWR ++ GIP P F+ AL+FYDG R LPANLIQAQR
Sbjct: 388 NLLLDDFFKSAVENCQDSWRRAISTGVQAGIPMPCFTTALSFYDGYRHAMLPANLIQAQR 447
Query: 150 DLFGAHQYQLLDHPGTYEHTDWTGHGGNAAASTYQA 43
D FGAH Y+LL PG + HT+WTGHGG+ ++S+Y A
Sbjct: 448 DYFGAHTYELLAKPGQFIHTNWTGHGGSVSSSSYNA 483
>sp|Q9DCD0|6PGD_MOUSE 6-phosphogluconate dehydrogenase, decarboxylating
Length = 483
Score = 333 bits (854), Expect = 4e-91
Identities = 161/276 (58%), Positives = 206/276 (74%)
Frame = -3
Query: 870 LLEMGNEEISNAFADWNNSELESFLIEITSSITKFKANDGTYLVEDIYDSAGQKGTGKWT 691
+L M +EE++ AF +WN +EL+SFLIEIT++I K++ DG L+ I DSAGQKGTGKWT
Sbjct: 208 VLGMRHEEMAQAFEEWNKTELDSFLIEITANILKYRDTDGKELLPKIRDSAGQKGTGKWT 267
Query: 690 AITALDFGVPVTLIAESVFARSLSALKSLRVEASKRFPSNNLLNFTGDKTKFLNQIKYAL 511
AI+AL++G+PVTLI E+VFAR LS+LK RV+AS++ ++ G K FL I+ AL
Sbjct: 268 AISALEYGMPVTLIGEAVFARCLSSLKEERVQASQKLKGPKVVQLEGSKKSFLEDIRKAL 327
Query: 510 YASKIISYTQGFMMMKSASHEFKWNLDLGKIALMWRGGCIIRSRFLQNIKDAYEKNKNLS 331
YASKIISY QGFM+++ A+ EF W L+ G IALMWRGGCIIRS FL IKDA+E+N L
Sbjct: 328 YASKIISYAQGFMLLRQAATEFGWTLNYGGIALMWRGGCIIRSVFLGKIKDAFERNPELQ 387
Query: 330 ILLFDKFFQSEILKCQESWRHVVANAALHGIPTPAFSCALAFYDGLRTEKLPANLIQAQR 151
LL D FF+S + CQ+SWR V++ GIP P F+ AL+FYDG R E LPANLIQAQR
Sbjct: 388 NLLLDDFFKSAVDNCQDSWRRVISTGVQAGIPMPCFTTALSFYDGYRHEMLPANLIQAQR 447
Query: 150 DLFGAHQYQLLDHPGTYEHTDWTGHGGNAAASTYQA 43
D FGAH Y+LL PG + HT+WTGHGG+ ++S+Y A
Sbjct: 448 DYFGAHTYELLTKPGEFIHTNWTGHGGSVSSSSYNA 483
>sp|P41570|6PGD_CERCA 6-phosphogluconate dehydrogenase, decarboxylating
Length = 481
Score = 330 bits (847), Expect = 2e-90
Identities = 171/275 (62%), Positives = 201/275 (73%)
Frame = -3
Query: 867 LEMGNEEISNAFADWNNSELESFLIEITSSITKFKANDGTYLVEDIYDSAGQKGTGKWTA 688
L + E++ F WN+ EL+SFLIEIT I ++ + G YL+E I D+AGQKGTGKWTA
Sbjct: 208 LGLSQAEMATEFEKWNSEELDSFLIEITRDILNYQDDRG-YLLERIRDTAGQKGTGKWTA 266
Query: 687 ITALDFGVPVTLIAESVFARSLSALKSLRVEASKRFPSNNLLNFTGDKTKFLNQIKYALY 508
I+AL +GVPVTLI E+VF+R LSALK RV ASK+ N+ D KFLN IK+ALY
Sbjct: 267 ISALQYGVPVTLIGEAVFSRCLSALKDERVAASKQLKGPNVNAKVEDLPKFLNHIKHALY 326
Query: 507 ASKIISYTQGFMMMKSASHEFKWNLDLGKIALMWRGGCIIRSRFLQNIKDAYEKNKNLSI 328
SKI+SY QGFM+M+ A+ E WNL+ G IALMWRGGCIIRS FL NIKDAY +N LS
Sbjct: 327 CSKIVSYAQGFMLMREAAKENNWNLNYGGIALMWRGGCIIRSVFLGNIKDAYTRNPQLSN 386
Query: 327 LLFDKFFQSEILKCQESWRHVVANAALHGIPTPAFSCALAFYDGLRTEKLPANLIQAQRD 148
LL D FF+ I Q SWR VVANA L GIP PA S AL+FYDG RTEKLPANL+QAQRD
Sbjct: 387 LLLDDFFKKAIEVGQNSWRQVVANAFLWGIPVPALSTALSFYDGYRTEKLPANLLQAQRD 446
Query: 147 LFGAHQYQLLDHPGTYEHTDWTGHGGNAAASTYQA 43
FGAH Y+LL G + HT+WTG GGN +ASTYQA
Sbjct: 447 YFGAHTYELLGAEGKFVHTNWTGTGGNVSASTYQA 481
>sp|O60037|6PGD_CUNEL 6-phosphogluconate dehydrogenase, decarboxylating
Length = 485
Score = 324 bits (831), Expect = 2e-88
Identities = 160/275 (58%), Positives = 200/275 (72%)
Frame = -3
Query: 867 LEMGNEEISNAFADWNNSELESFLIEITSSITKFKANDGTYLVEDIYDSAGQKGTGKWTA 688
L + ++E+++ F +WN +L+SFLIEIT I +FK DG LV I D+AGQKGTGKWTA
Sbjct: 211 LGLSHDEMADIFEEWNKGDLDSFLIEITRDILRFKDTDGQPLVTKIRDTAGQKGTGKWTA 270
Query: 687 ITALDFGVPVTLIAESVFARSLSALKSLRVEASKRFPSNNLLNFTGDKTKFLNQIKYALY 508
I +LD G+PVTLI E+V++R LS+LK RV ASK + FTGDK F+ Q+ ALY
Sbjct: 271 IDSLDRGIPVTLIGEAVYSRCLSSLKDERVRASKILQGPSSSKFTGDKKTFIAQLGQALY 330
Query: 507 ASKIISYTQGFMMMKSASHEFKWNLDLGKIALMWRGGCIIRSRFLQNIKDAYEKNKNLSI 328
A+KI+SY QG+M+M+ A+ +++W L+ IALMWRGGCIIRS FL I+DAY KN L
Sbjct: 331 AAKIVSYAQGYMLMRQAAKDYEWKLNNAGIALMWRGGCIIRSVFLGKIRDAYTKNPELEN 390
Query: 327 LLFDKFFQSEILKCQESWRHVVANAALHGIPTPAFSCALAFYDGLRTEKLPANLIQAQRD 148
LLFD FF+ K Q++WR+V A A L GIPTPA S AL FYDGLR E LPANL+QAQRD
Sbjct: 391 LLFDDFFKDATAKAQDAWRNVTAQAVLMGIPTPALSTALNFYDGLRHEILPANLLQAQRD 450
Query: 147 LFGAHQYQLLDHPGTYEHTDWTGHGGNAAASTYQA 43
FGAH Y+LL PG + HT+WTG GGN +ASTY A
Sbjct: 451 YFGAHTYELLHTPGKWVHTNWTGRGGNVSASTYDA 485
>sp|P41572|6PGD_DROME 6-phosphogluconate dehydrogenase, decarboxylating
Length = 481
Score = 323 bits (829), Expect = 3e-88
Identities = 165/275 (60%), Positives = 200/275 (72%)
Frame = -3
Query: 867 LEMGNEEISNAFADWNNSELESFLIEITSSITKFKANDGTYLVEDIYDSAGQKGTGKWTA 688
L + +++++ F WN++EL+SFLIEIT I K+K G YL+E I D+AGQKGTGKWTA
Sbjct: 208 LGLSADQMADEFGKWNSAELDSFLIEITRDILKYKDGKG-YLLERIRDTAGQKGTGKWTA 266
Query: 687 ITALDFGVPVTLIAESVFARSLSALKSLRVEASKRFPSNNLLNFTGDKTKFLNQIKYALY 508
I AL +GVPVTLI E+VF+R LSALK RV+AS + + TKFL+ IK+ALY
Sbjct: 267 IAALQYGVPVTLIGEAVFSRCLSALKDERVQASSVLKGPSTKAQVANLTKFLDDIKHALY 326
Query: 507 ASKIISYTQGFMMMKSASHEFKWNLDLGKIALMWRGGCIIRSRFLQNIKDAYEKNKNLSI 328
+KI+SY QGFM+M+ A+ E KW L+ G IALMWRGGCIIRS FL NIKDAY LS
Sbjct: 327 CAKIVSYAQGFMLMREAARENKWRLNYGGIALMWRGGCIIRSVFLGNIKDAYTSQPELSN 386
Query: 327 LLFDKFFQSEILKCQESWRHVVANAALHGIPTPAFSCALAFYDGLRTEKLPANLIQAQRD 148
LL D FF+ I + Q+SWR VVANA GIP PA S AL+FYDG RT KLPANL+QAQRD
Sbjct: 387 LLLDDFFKKAIERGQDSWREVVANAFRWGIPVPALSTALSFYDGYRTAKLPANLLQAQRD 446
Query: 147 LFGAHQYQLLDHPGTYEHTDWTGHGGNAAASTYQA 43
FGAH Y+LL G + HT+WTG GGN +ASTYQA
Sbjct: 447 YFGAHTYELLGQEGQFHHTNWTGTGGNVSASTYQA 481
>sp|P41573|6PGD_DROSI 6-phosphogluconate dehydrogenase, decarboxylating
Length = 481
Score = 322 bits (824), Expect = 1e-87
Identities = 164/275 (59%), Positives = 200/275 (72%)
Frame = -3
Query: 867 LEMGNEEISNAFADWNNSELESFLIEITSSITKFKANDGTYLVEDIYDSAGQKGTGKWTA 688
L + +++++ F WN++EL+SFLIEIT I K+K G +L+E I D+AGQKGTGKWTA
Sbjct: 208 LGLSADQMADEFGKWNSAELDSFLIEITRDILKYKDGKG-HLLERIRDTAGQKGTGKWTA 266
Query: 687 ITALDFGVPVTLIAESVFARSLSALKSLRVEASKRFPSNNLLNFTGDKTKFLNQIKYALY 508
I AL +GVPVTLI E+VF+R LSALK RV+AS + + TKFL+ IK+ALY
Sbjct: 267 IAALQYGVPVTLIGEAVFSRCLSALKDERVQASSVLKGPSTKAEVANLTKFLDDIKHALY 326
Query: 507 ASKIISYTQGFMMMKSASHEFKWNLDLGKIALMWRGGCIIRSRFLQNIKDAYEKNKNLSI 328
+KI+SY QGFM+M+ A+ E KW L+ G IALMWRGGCIIRS FL NIKDAY LS
Sbjct: 327 CAKIVSYAQGFMLMREAARENKWRLNYGGIALMWRGGCIIRSVFLGNIKDAYTSQPQLSN 386
Query: 327 LLFDKFFQSEILKCQESWRHVVANAALHGIPTPAFSCALAFYDGLRTEKLPANLIQAQRD 148
LL D FF+ I + Q+SWR VVANA GIP PA S AL+FYDG RT KLPANL+QAQRD
Sbjct: 387 LLLDDFFKKAIERGQDSWREVVANAFRWGIPVPALSTALSFYDGYRTAKLPANLLQAQRD 446
Query: 147 LFGAHQYQLLDHPGTYEHTDWTGHGGNAAASTYQA 43
FGAH Y+LL G + HT+WTG GGN +ASTYQA
Sbjct: 447 YFGAHTYELLGQEGQFHHTNWTGTGGNVSASTYQA 481
>sp|Q17761|6PGD_CAEEL 6-phosphogluconate dehydrogenase, decarboxylating
Length = 484
Score = 319 bits (817), Expect = 7e-87
Identities = 160/277 (57%), Positives = 198/277 (71%), Gaps = 2/277 (0%)
Frame = -3
Query: 867 LEMGNEEISNAFADWNNSELESFLIEITSSITKFKANDGTYLVEDIYDSAGQKGTGKWTA 688
+E+ +++++ DWN ELESFLIEIT++I K++ G +V I DSAGQKGTGKWT
Sbjct: 208 VELNHDQMAEVLDDWNKGELESFLIEITANILKYRDEQGEPIVPKIRDSAGQKGTGKWTC 267
Query: 687 ITALDFGVPVTLIAESVFARSLSALKSLRVEASKRFPSNNLLNFT--GDKTKFLNQIKYA 514
AL++G+PVTLI E+VFAR LSALK RV ASK+ P + T DK F+ QI A
Sbjct: 268 FAALEYGLPVTLIGEAVFARCLSALKDERVRASKQLPRPQVSPDTVVQDKRVFIKQISKA 327
Query: 513 LYASKIISYTQGFMMMKSASHEFKWNLDLGKIALMWRGGCIIRSRFLQNIKDAYEKNKNL 334
LYASKI+SY QGFM++ AS +F WNL+ G IALMWRGGCIIRSRFL +I+ A++KNK L
Sbjct: 328 LYASKIVSYAQGFMLLAEASKQFNWNLNFGAIALMWRGGCIIRSRFLGDIEHAFQKNKQL 387
Query: 333 SILLFDKFFQSEILKCQESWRHVVANAALHGIPTPAFSCALAFYDGLRTEKLPANLIQAQ 154
S LL D FF I + Q+SWR VV A GIP PAFS ALAFYDG +E +PANL+QAQ
Sbjct: 388 SNLLLDDFFTKAITEAQDSWRVVVCAAVRLGIPVPAFSSALAFYDGYTSEVVPANLLQAQ 447
Query: 153 RDLFGAHQYQLLDHPGTYEHTDWTGHGGNAAASTYQA 43
RD FGAH Y+LL PGT+ HT+WTG GG ++ Y A
Sbjct: 448 RDYFGAHTYELLAKPGTWVHTNWTGTGGRVTSNAYNA 484
>sp|P38720|6PGD1_YEAST 6-phosphogluconate dehydrogenase, decarboxylating 1
Length = 489
Score = 301 bits (771), Expect = 2e-81
Identities = 155/279 (55%), Positives = 196/279 (70%), Gaps = 8/279 (2%)
Frame = -3
Query: 855 NEEISNAFADWNNSELESFLIEITSSITKFKANDGTYLVEDIYDSAGQKGTGKWTAITAL 676
++EIS+ FA WNN L+SFL+EIT I KF DG LVE I D+AGQKGTGKWTAI AL
Sbjct: 211 DKEISDVFAKWNNGVLDSFLVEITRDILKFDDVDGKPLVEKIMDTAGQKGTGKWTAINAL 270
Query: 675 DFGVPVTLIAESVFARSLSALKSLRVEASKRFPSNNL-LNFTGDKTKFLNQIKYALYASK 499
D G+PVTLI E+VFAR LSALK+ R+ ASK P + + D+ +F++ ++ ALYASK
Sbjct: 271 DLGMPVTLIGEAVFARCLSALKNERIRASKVLPGPEVPKDAVKDREQFVDDLEQALYASK 330
Query: 498 IISYTQGFMMMKSASHEFKWNLDLGKIALMWRGGCIIRSRFLQNIKDAYEKNKNLSILLF 319
IISY QGFM+++ A+ + W L+ IALMWRGGCIIRS FL I AY + +L LLF
Sbjct: 331 IISYAQGFMLIREAAATYGWKLNNPAIALMWRGGCIIRSVFLGQITKAYREEPDLENLLF 390
Query: 318 DKFFQSEILKCQESWRHVVANAALHGIPTPAFSCALAFYDGLRTEKLPANLIQAQRDLFG 139
+KFF + K Q WR +A A +GIPTPAFS AL+FYDG R+E+LPANL+QAQRD FG
Sbjct: 391 NKFFADAVTKAQSGWRKSIALATTYGIPTPAFSTALSFYDGYRSERLPANLLQAQRDYFG 450
Query: 138 AHQYQLLDHPGTYE-------HTDWTGHGGNAAASTYQA 43
AH +++L + H +WTGHGGN ++STYQA
Sbjct: 451 AHTFRVLPECASDNLPVDKDIHINWTGHGGNVSSSTYQA 489
>sp|P14332|6PGD_PIG 6-phosphogluconate dehydrogenase, decarboxylating
Length = 250
Score = 300 bits (769), Expect = 3e-81
Identities = 149/251 (59%), Positives = 186/251 (74%)
Frame = -3
Query: 795 IEITSSITKFKANDGTYLVEDIYDSAGQKGTGKWTAITALDFGVPVTLIAESVFARSLSA 616
IEIT++I KF+ DG +L+ I DSAGQKGTGKWTAI+AL++GVPVTLI E+VFAR LS+
Sbjct: 1 IEITANILKFQDADGKHLLPKIRDSAGQKGTGKWTAISALEYGVPVTLIGEAVFARCLSS 60
Query: 615 LKSLRVEASKRFPSNNLLNFTGDKTKFLNQIKYALYASKIISYTQGFMMMKSASHEFKWN 436
LK RV+ASK+ + F+GDK FL I+ ALYASKIISYTQGFM+++ A+ EF W+
Sbjct: 61 LKDERVQASKKLKGPQKIQFSGDKKSFLEDIRKALYASKIISYTQGFMLLRQAAAEFGWS 120
Query: 435 LDLGKIALMWRGGCIIRSRFLQNIKDAYEKNKNLSILLFDKFFQSEILKCQESWRHVVAN 256
+ LMWRGGCIIRS FL IKDA+++N L LL D FF+S + CQ+SWR V+
Sbjct: 121 -STTEHRLMWRGGCIIRSVFLGKIKDAFDRNPGLQNLLLDDFFKSAVEDCQDSWRRAVST 179
Query: 255 AALHGIPTPAFSCALAFYDGLRTEKLPANLIQAQRDLFGAHQYQLLDHPGTYEHTDWTGH 76
GIP P F+ AL+FYDG R E LPANLIQAQRD FGAH Y+LL PG + HT+WTGH
Sbjct: 180 GVQTGIPMPCFTTALSFYDGYRHEMLPANLIQAQRDYFGAHTYELLAKPGHFVHTNWTGH 239
Query: 75 GGNAAASTYQA 43
GG+ ++S+Y A
Sbjct: 240 GGSVSSSSYNA 250
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,092,369
Number of Sequences: 369166
Number of extensions: 2210126
Number of successful extensions: 5726
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5654
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8646143400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)