Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_006_O08
(805 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11833|TBB_PARLI Tubulin beta chain (Beta tubulin) 494 e-139
sp|P30883|TBB4_XENLA Tubulin beta-4 chain 494 e-139
sp|P68372|TBBX_MOUSE Tubulin beta-? chain >gi|55977480|sp|P... 493 e-139
sp|P02554|TBB_PIG Tubulin beta chain 492 e-139
sp|Q7JJU6|TBB2_PANTR Tubulin beta-2 chain >gi|56754798|sp|P... 491 e-139
sp|Q24560|TBB1_DROME Tubulin beta-1 chain (Beta-1 tubulin) 491 e-138
sp|Q91240|TBB_PSEAM Tubulin beta chain (Beta tubulin) 491 e-138
sp|P13602|TBB2_XENLA Tubulin beta-2 chain (Beta-2 tubulin) 490 e-138
sp|P04691|TBB1_RAT Tubulin beta chain (T beta-15) 490 e-138
sp|P32882|TBB2_CHICK Tubulin beta-2 chain (Beta-tubulin cla... 490 e-138
>sp|P11833|TBB_PARLI Tubulin beta chain (Beta tubulin)
Length = 447
Score = 494 bits (1271), Expect = e-139
Identities = 240/267 (89%), Positives = 248/267 (92%)
Frame = +3
Query: 3 PRAVLIDLEPGTMDSVRAGPFGQLYRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDIV 182
PRAVL+DLEPGTMDSVR+GPFGQ++RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD+V
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 183 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 362
RKEAESCDCLQGFQ KIREEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 363 EPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 542
EPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 543 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMM 722
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS+QYRALTVPELTQQMFDAKNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300
Query: 723 AACDPRHGRYLTVAALFRGRMSMKEVD 803
AACDPRHGRYLTVAA+FRGRMSMKEVD
Sbjct: 301 AACDPRHGRYLTVAAIFRGRMSMKEVD 327
>sp|P30883|TBB4_XENLA Tubulin beta-4 chain
Length = 445
Score = 494 bits (1271), Expect = e-139
Identities = 240/267 (89%), Positives = 248/267 (92%)
Frame = +3
Query: 3 PRAVLIDLEPGTMDSVRAGPFGQLYRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDIV 182
PRAVL+DLEPGTMDSVR+GPFGQ++RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD+V
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 183 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 362
RKEAESCDCLQGFQ KIREEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 363 EPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 542
EPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 543 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMM 722
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS+QYRALTVPELTQQMFDAKNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300
Query: 723 AACDPRHGRYLTVAALFRGRMSMKEVD 803
AACDPRHGRYLTVAA+FRGRMSMKEVD
Sbjct: 301 AACDPRHGRYLTVAAIFRGRMSMKEVD 327
>sp|P68372|TBBX_MOUSE Tubulin beta-? chain
sp|P68371|TBBX_HUMAN Tubulin beta-? chain (Tubulin beta-2 chain)
Length = 445
Score = 493 bits (1270), Expect = e-139
Identities = 240/267 (89%), Positives = 248/267 (92%)
Frame = +3
Query: 3 PRAVLIDLEPGTMDSVRAGPFGQLYRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDIV 182
PRAVL+DLEPGTMDSVR+GPFGQ++RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD+V
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 183 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 362
RKEAESCDCLQGFQ KIREEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 363 EPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 542
EPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 543 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMM 722
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS+QYRALTVPELTQQMFDAKNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300
Query: 723 AACDPRHGRYLTVAALFRGRMSMKEVD 803
AACDPRHGRYLTVAA+FRGRMSMKEVD
Sbjct: 301 AACDPRHGRYLTVAAVFRGRMSMKEVD 327
>sp|P02554|TBB_PIG Tubulin beta chain
Length = 445
Score = 492 bits (1266), Expect = e-139
Identities = 238/267 (89%), Positives = 248/267 (92%)
Frame = +3
Query: 3 PRAVLIDLEPGTMDSVRAGPFGQLYRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDIV 182
PRA+L+DLEPGTMDSVR+GPFGQ++RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD+V
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 183 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 362
RKE+ESCDCLQGFQ KIREEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121 RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 363 EPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 542
EPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 543 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMM 722
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS+QYRALTVPELTQQMFDAKNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300
Query: 723 AACDPRHGRYLTVAALFRGRMSMKEVD 803
AACDPRHGRYLTVAA+FRGRMSMKEVD
Sbjct: 301 AACDPRHGRYLTVAAVFRGRMSMKEVD 327
>sp|Q7JJU6|TBB2_PANTR Tubulin beta-2 chain
sp|P69895|TBB2_MACMU Tubulin beta-2 chain
sp|P07437|TBB2_HUMAN Tubulin beta-2 chain
sp|P09244|TBB7_CHICK Tubulin beta-7 chain (Tubulin beta 4')
sp|P99024|TBB5_MOUSE Tubulin beta-5 chain
sp|P69897|TBB5_RAT Tubulin beta-5 chain
sp|P69893|TBB1_CRIGR Tubulin beta-1 chain (Beta-tubulin isotype I) (Class I beta
tubulin)
Length = 444
Score = 491 bits (1265), Expect = e-139
Identities = 238/267 (89%), Positives = 248/267 (92%)
Frame = +3
Query: 3 PRAVLIDLEPGTMDSVRAGPFGQLYRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDIV 182
PRA+L+DLEPGTMDSVR+GPFGQ++RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD+V
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 183 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 362
RKEAESCDCLQGFQ KIREEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 363 EPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 542
EPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 543 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMM 722
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS+QYRALTVPELTQQ+FDAKNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM 300
Query: 723 AACDPRHGRYLTVAALFRGRMSMKEVD 803
AACDPRHGRYLTVAA+FRGRMSMKEVD
Sbjct: 301 AACDPRHGRYLTVAAVFRGRMSMKEVD 327
>sp|Q24560|TBB1_DROME Tubulin beta-1 chain (Beta-1 tubulin)
Length = 447
Score = 491 bits (1263), Expect = e-138
Identities = 238/267 (89%), Positives = 247/267 (92%)
Frame = +3
Query: 3 PRAVLIDLEPGTMDSVRAGPFGQLYRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDIV 182
PRAVL+DLEPGTMDSVR+GPFGQ++RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD+V
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 183 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 362
RKEAESCDCLQGFQ KIREEYPDRIMNT+SVVPSPKVSDTVV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVV 180
Query: 363 EPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 542
EPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVS TMSGVTTCL
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGVTTCL 240
Query: 543 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMM 722
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS+QYRALTVPELTQQMFDAKNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300
Query: 723 AACDPRHGRYLTVAALFRGRMSMKEVD 803
AACDPRHGRYLTVAA+FRGRMSMKEVD
Sbjct: 301 AACDPRHGRYLTVAAIFRGRMSMKEVD 327
>sp|Q91240|TBB_PSEAM Tubulin beta chain (Beta tubulin)
Length = 445
Score = 491 bits (1263), Expect = e-138
Identities = 239/267 (89%), Positives = 247/267 (92%)
Frame = +3
Query: 3 PRAVLIDLEPGTMDSVRAGPFGQLYRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDIV 182
PRAVL+DLEPGTMDSVR+G FGQ++RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD+V
Sbjct: 61 PRAVLVDLEPGTMDSVRSGAFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 183 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 362
RKEAESCDCLQGFQ KIREEYPDRIMNTFSVVPSPKVSDTVV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 363 EPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 542
EPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 543 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMM 722
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS+QYRALTVPELTQQMFDAKNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300
Query: 723 AACDPRHGRYLTVAALFRGRMSMKEVD 803
AACDPRHGRYLTVAA+FRGRMSMKEVD
Sbjct: 301 AACDPRHGRYLTVAAIFRGRMSMKEVD 327
>sp|P13602|TBB2_XENLA Tubulin beta-2 chain (Beta-2 tubulin)
Length = 443
Score = 490 bits (1261), Expect = e-138
Identities = 236/267 (88%), Positives = 248/267 (92%)
Frame = +3
Query: 3 PRAVLIDLEPGTMDSVRAGPFGQLYRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDIV 182
PRA+L+DLEPGTMDSVR+GPFGQ++RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD+V
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 183 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 362
RKE+ESCDCLQGFQ KIREEYPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121 RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180
Query: 363 EPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 542
EPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 543 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMM 722
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS+QYRALTVPELTQQMFD+KNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300
Query: 723 AACDPRHGRYLTVAALFRGRMSMKEVD 803
AACDPRHGRYLTVAA+FRGRMSMKEVD
Sbjct: 301 AACDPRHGRYLTVAAIFRGRMSMKEVD 327
>sp|P04691|TBB1_RAT Tubulin beta chain (T beta-15)
Length = 445
Score = 490 bits (1261), Expect = e-138
Identities = 236/267 (88%), Positives = 248/267 (92%)
Frame = +3
Query: 3 PRAVLIDLEPGTMDSVRAGPFGQLYRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDIV 182
PRA+L+DLEPGTMDSVR+GPFGQ++RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD+V
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 183 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 362
RKE+ESCDCLQGFQ KIREEYPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121 RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180
Query: 363 EPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 542
EPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 543 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMM 722
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS+QYRALTVPELTQQMFD+KNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300
Query: 723 AACDPRHGRYLTVAALFRGRMSMKEVD 803
AACDPRHGRYLTVAA+FRGRMSMKEVD
Sbjct: 301 AACDPRHGRYLTVAAIFRGRMSMKEVD 327
>sp|P32882|TBB2_CHICK Tubulin beta-2 chain (Beta-tubulin class-II)
Length = 445
Score = 490 bits (1261), Expect = e-138
Identities = 236/267 (88%), Positives = 248/267 (92%)
Frame = +3
Query: 3 PRAVLIDLEPGTMDSVRAGPFGQLYRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDIV 182
PRA+L+DLEPGTMDSVR+GPFGQ++RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD+V
Sbjct: 61 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 183 RKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTFSVVPSPKVSDTVV 362
RKE+ESCDCLQGFQ KIREEYPDRIMNTFSV+PSPKVSDTVV
Sbjct: 121 RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMPSPKVSDTVV 180
Query: 363 EPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 542
EPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 543 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSRQYRALTVPELTQQMFDAKNMM 722
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGS+QYRALTVPELTQQMFD+KNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM 300
Query: 723 AACDPRHGRYLTVAALFRGRMSMKEVD 803
AACDPRHGRYLTVAA+FRGRMSMKEVD
Sbjct: 301 AACDPRHGRYLTVAAIFRGRMSMKEVD 327
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,964,041
Number of Sequences: 369166
Number of extensions: 1779030
Number of successful extensions: 5330
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4899
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7618580670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)