Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_006_O07
(931 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q27245|YH24_CAEEL Putative aminopeptidase W07G4.4 in chr... 185 1e-46
sp|O84049|AMPA_CHLTR Probable cytosol aminopeptidase (Leuci... 69 2e-11
sp|P38019|AMPA_CHLMU Probable cytosol aminopeptidase (Leuci... 67 5e-11
sp|P47707|AMPA_MYCSA Probable cytosol aminopeptidase (Leuci... 65 4e-10
sp|Q823J9|AMPA_CHLCV Probable cytosol aminopeptidase (Leuci... 64 5e-10
sp|Q9Z8F8|AMPA_CHLPN Probable cytosol aminopeptidase (Leuci... 62 3e-09
sp|Q9PP04|AMPA_CAMJE Probable cytosol aminopeptidase (Leuci... 60 1e-08
sp|Q9Y935|AMPA_AERPE Probable cytosol aminopeptidase (Leuci... 60 1e-08
sp|Q816E3|AMPA_BACCR Probable cytosol aminopeptidase (Leuci... 59 3e-08
sp|Q88P73|AMPA_PSEPK Probable cytosol aminopeptidase (Leuci... 59 3e-08
>sp|Q27245|YH24_CAEEL Putative aminopeptidase W07G4.4 in chromosome V
Length = 522
Score = 185 bits (470), Expect = 1e-46
Identities = 115/313 (36%), Positives = 185/313 (59%), Gaps = 16/313 (5%)
Frame = +2
Query: 41 VRSCINVKLV--ADINDNNYDCVVAVN--DSLSHFGAA--LKSVEDALSNFKQYHPKLES 202
++S ++ K+V I D +D VV V D++ FGA + ++ A++NF + H +
Sbjct: 3 LQSLLSTKIVRATSIADAAFDAVVLVGSQDNVQQFGAIQQVSAIAPAVNNFLKLHSGAFN 62
Query: 203 TLTLVPLNEHV--SKKLIFSPINSLNDDYDDSRRITEASNSGIKMAINLGLRNPLLVFGD 376
+ +LV ++ V S +LI S +++ DYDD RR A+ GI MA++ G+++PLL+
Sbjct: 63 STSLVQVDSSVVPSGRLILSGTGNVSRDYDDVRRYQAAARKGISMALSAGVKSPLLI--- 119
Query: 377 FQTLPEKRPQWGSKELIEINVILGALFAAYVPIEIREDIPKRASKIDKLGVFGVDNKSIN 556
TLP R + + EL+ LGAL Y P+ +RE+ K+ K+++LG+ + N +
Sbjct: 120 --TLPNSR--FPNAELV---AALGALTPVYTPLNVREEENKQ--KLNQLGLLAIGNSDTS 170
Query: 557 -----IAVALEESRRVTRDIGGSDPERMTAIKIAEFITKEFHGTDIKIEI---ESIDGTK 712
+ A + S V RD+G + PERM ++AE+I F +IK+ + +S+
Sbjct: 171 ARLEKLVEAYDASFTVCRDVGEAGPERMAPPRVAEYIQGAFANGNIKVTVVDDQSVILKD 230
Query: 713 YPLMAAVNRAASVIERHDGRVVKFEYDSKDQVEETIFLVGKGITYDTGGADVKAGGHMAG 892
+PLMAAVNRAA+ ++ H R+++ EY + + ++T F+VGKG+T DTGG D+K GGHM G
Sbjct: 231 FPLMAAVNRAANCVKEHQARLIRLEYVGEGETQDTFFVVGKGVTIDTGGCDLKTGGHMFG 290
Query: 893 MHRDKCGAAAVTG 931
M RDK G+A V G
Sbjct: 291 MCRDKYGSAVVGG 303
>sp|O84049|AMPA_CHLTR Probable cytosol aminopeptidase (Leucine aminopeptidase) (LAP)
(Leucyl aminopeptidase)
Length = 499
Score = 68.6 bits (166), Expect = 2e-11
Identities = 48/148 (32%), Positives = 81/148 (54%), Gaps = 8/148 (5%)
Frame = +2
Query: 512 IDKLGVFGVDNKSINIAVALEESR----RVTRDIGGSDPERMTAIK---IAEFITKEFHG 670
++K+ V G+ +K + EES +TRD+ ++ + +T K +A+ + EF
Sbjct: 152 LEKVTVMGIVSKVGDKIFRKEESLFEGVYLTRDLVNTNADEVTPEKLAAVAKDLAGEFAS 211
Query: 671 TDIKI-EIESIDGTKYPLMAAVNRAASVIERHDGRVVKFEYDSKDQVEETIFLVGKGITY 847
D+KI + ++I K L+AAV + A+V + R + +Y K + ++ L+GKG+T+
Sbjct: 212 LDVKILDRKAILKEKMGLLAAVAKGAAV----EPRFIVLDYQGKPKSKDRTVLIGKGVTF 267
Query: 848 DTGGADVKAGGHMAGMHRDKCGAAAVTG 931
D+GG D+K G M M D GAA V G
Sbjct: 268 DSGGLDLKPGKAMITMKEDMAGAATVLG 295
>sp|P38019|AMPA_CHLMU Probable cytosol aminopeptidase (Leucine aminopeptidase) (LAP)
(Leucyl aminopeptidase)
Length = 499
Score = 67.4 bits (163), Expect = 5e-11
Identities = 47/148 (31%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Frame = +2
Query: 512 IDKLGVFG----VDNKSINIAVALEESRRVTRDIGGSDPERMTAIK---IAEFITKEFHG 670
++K+ V G V +K +L E +TRD+ ++ + +T K +A+ + EF
Sbjct: 152 LEKVTVLGIVPKVGDKIFRKEESLFEGVYLTRDLVNTNADEVTPEKLAAVAKGLAGEFAS 211
Query: 671 TDIKI-EIESIDGTKYPLMAAVNRAASVIERHDGRVVKFEYDSKDQVEETIFLVGKGITY 847
D+KI + ++I K L+AAV + ++V + R + +Y K + ++ L+GKG+T+
Sbjct: 212 LDVKILDRKAILKEKMGLLAAVAKGSAV----EPRFIVLDYQGKPKSKDRTVLIGKGVTF 267
Query: 848 DTGGADVKAGGHMAGMHRDKCGAAAVTG 931
D+GG D+K G M M D GAA V G
Sbjct: 268 DSGGLDLKPGKAMITMKEDMAGAATVLG 295
>sp|P47707|AMPA_MYCSA Probable cytosol aminopeptidase (Leucine aminopeptidase) (LAP)
(Leucyl aminopeptidase)
Length = 520
Score = 64.7 bits (156), Expect = 4e-10
Identities = 41/126 (32%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Frame = +2
Query: 560 AVALEESRRVTRDIGGSDPERMTAIKIAEFITKEF---HGTDIKI-EIESIDGTKYPLMA 727
A+ L +++ R++G + P + + ++AE I K+F H +K+ E + I+ L+
Sbjct: 141 ALILVDAQNFARNLGVTPPNELNSEQLAEIIRKDFKKYHNLKVKVLERKQIELLGMDLLL 200
Query: 728 AVNRAASVIERHDGRVVKFEYDSKDQVEETIFLVGKGITYDTGGADVKAGGHMAGMHRDK 907
+VN+ + ++ RVV EY +E LVGKGIT+D+GG +K M GM D
Sbjct: 201 SVNKGSV----YEPRVVIIEYKGNPSSQEKTVLVGKGITFDSGGYSLKPPKFMLGMKYDM 256
Query: 908 CGAAAV 925
G+A V
Sbjct: 257 SGSAIV 262
>sp|Q823J9|AMPA_CHLCV Probable cytosol aminopeptidase (Leucine aminopeptidase) (LAP)
(Leucyl aminopeptidase)
Length = 499
Score = 64.3 bits (155), Expect = 5e-10
Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 8/148 (5%)
Frame = +2
Query: 512 IDKLGVFGVDNKSINIAVALEESR----RVTRDIGGSDPERMTAIKIAEF---ITKEFHG 670
+ K+ V G+ K + EE+ +TRD+ + + +T K+A + KEF
Sbjct: 152 LTKVNVLGIVPKIADRIFRKEENIFEGVYLTRDLVNGNADEVTPQKLANIAKGMAKEFPS 211
Query: 671 TDIKI-EIESIDGTKYPLMAAVNRAASVIERHDGRVVKFEYDSKDQVEETIFLVGKGITY 847
D+KI ++I K L+AAV + ++V D + Y K + ++ L+GKG+T+
Sbjct: 212 MDVKILNKDAILKEKMGLLAAVAKGSAV----DPCFIVLTYQGKPKSKDHTVLIGKGVTF 267
Query: 848 DTGGADVKAGGHMAGMHRDKCGAAAVTG 931
D+GG D+K G M M D GAA V G
Sbjct: 268 DSGGLDLKPGKAMLTMKEDMAGAATVLG 295
>sp|Q9Z8F8|AMPA_CHLPN Probable cytosol aminopeptidase (Leucine aminopeptidase) (LAP)
(Leucyl aminopeptidase)
Length = 499
Score = 61.6 bits (148), Expect = 3e-09
Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 8/148 (5%)
Frame = +2
Query: 512 IDKLGVFGVDNKSINIA----VALEESRRVTRDIGGSDPERMTAIKIAEF---ITKEFHG 670
+ K+ V G+ K + A+ E +TRD+ + + +T K+AE + KEF
Sbjct: 152 LSKVTVIGIVPKMADAIFRKEAAIFEGVYLTRDLVNRNADEITPKKLAEVALNLGKEFPS 211
Query: 671 TDIKI-EIESIDGTKYPLMAAVNRAASVIERHDGRVVKFEYDSKDQVEETIFLVGKGITY 847
D K+ ++I K L+ AV++ + V D + Y + + ++ L+GKG+T+
Sbjct: 212 IDTKVLGKDAIAKEKMGLLLAVSKGSCV----DPHFIVVRYQGRPKSKDHTVLIGKGVTF 267
Query: 848 DTGGADVKAGGHMAGMHRDKCGAAAVTG 931
D+GG D+K G M M D G A V G
Sbjct: 268 DSGGLDLKPGKSMLTMKEDMAGGATVLG 295
>sp|Q9PP04|AMPA_CAMJE Probable cytosol aminopeptidase (Leucine aminopeptidase) (LAP)
(Leucyl aminopeptidase)
Length = 483
Score = 59.7 bits (143), Expect = 1e-08
Identities = 56/184 (30%), Positives = 80/184 (43%), Gaps = 18/184 (9%)
Frame = +2
Query: 434 NVILGALFAAYVPIEIREDIPKRASKIDKLGVFGVDNKSIN--------IAVALEESR-- 583
+++ G LF AY + D K K L F + N+ +N + LE
Sbjct: 103 SLVEGVLFGAY-----KFDKYKSEKKTSTLEKFIISNEELNGKKFNKDEAKIGLERGEIL 157
Query: 584 ----RVTRDIGGSDPERMTAIKIAEF---ITKEFHGTDIKIEIES-IDGTKYPLMAAVNR 739
T++I PE T +K+AE + KE KI E + K AVN
Sbjct: 158 ANATNFTKNIVNEIPEIYTPLKMAEDAQNLAKENKNIICKIYDEKFLAKEKMNAFLAVNH 217
Query: 740 AASVIERHDGRVVKFEYDSKDQVEETIFLVGKGITYDTGGADVKAGGHMAGMHRDKCGAA 919
A+ H R++ Y +K+ + +F VGKG+TYD+GG +K M M DK GAA
Sbjct: 218 ASV----HPPRLIHLSYKAKNAKKRVVF-VGKGLTYDSGGLSLKPADFMLTMKADKSGAA 272
Query: 920 AVTG 931
A G
Sbjct: 273 AAMG 276
>sp|Q9Y935|AMPA_AERPE Probable cytosol aminopeptidase (Leucine aminopeptidase) (LAP)
(Leucyl aminopeptidase)
Length = 524
Score = 59.7 bits (143), Expect = 1e-08
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 1/165 (0%)
Frame = +2
Query: 440 ILGALFAAYVPIEIREDIPKRASKIDKLGVFGVDNKSINIAVALEESRRVTRDIGGSDPE 619
++GAL AY + E R K+ +L V+G + + ++ A A+ E + RDI + P
Sbjct: 155 VIGALLGAY---RLEEFKNTRKRKLQQLWVYGGEPR-LDYAQAVAEGVYLARDIANAPPH 210
Query: 620 RMTAIKIAEFITKEFHGTD-IKIEIESIDGTKYPLMAAVNRAASVIERHDGRVVKFEYDS 796
R+ K+A + F D + +E+ S D + E R++ +Y
Sbjct: 211 RLPPAKLAAAVEDLFSKFDNVDVEVFSYDRLLEEGFGGIVSVGMGSEEKP-RLIIIKY-- 267
Query: 797 KDQVEETIFLVGKGITYDTGGADVKAGGHMAGMHRDKCGAAAVTG 931
+ E I LVGK + +D+GG ++K M M DK G AAV G
Sbjct: 268 RGGAGEPIALVGKAVVFDSGGINLKPSQGMTLMRADKAGGAAVVG 312
>sp|Q816E3|AMPA_BACCR Probable cytosol aminopeptidase (Leucine aminopeptidase) (LAP)
(Leucyl aminopeptidase)
Length = 494
Score = 58.5 bits (140), Expect = 3e-08
Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Frame = +2
Query: 593 RDIGGSDPERMTAIKIAEFITK--EFHGTDIKI-EIESIDGTKYPLMAAVNRAASVIERH 763
R + P +TA K+AE+ + E + D K+ E E ++ + AVN+ +
Sbjct: 181 RTLVNMPPNVLTATKLAEYAVELAEKYDMDYKVLEKEEMEDLGMGALLAVNQGSV----E 236
Query: 764 DGRVVKFEYDSKDQVEETIFLVGKGITYDTGGADVKAGGHMAGMHRDKCGAAAVTG 931
+++ Y K++ ++ I VGKGITYDTGG +K M GM D GAAAV G
Sbjct: 237 PPKMIALIYKGKEEWKDVIGFVGKGITYDTGGYSLKpreGMVGMKGDMGGAAAVLG 292
>sp|Q88P73|AMPA_PSEPK Probable cytosol aminopeptidase (Leucine aminopeptidase) (LAP)
(Leucyl aminopeptidase)
Length = 497
Score = 58.5 bits (140), Expect = 3e-08
Identities = 44/140 (31%), Positives = 63/140 (45%), Gaps = 1/140 (0%)
Frame = +2
Query: 515 DKLGVFGVDNKSINIAVALEESRRVTRDIGGSDPERMTAIKIAEFITKEFHGTDIKIEIE 694
DK G V+ +++ A A+ TRD+G P +AE KE +++E
Sbjct: 162 DKAGQAEVE-RAVKHASAIASGMAFTRDLGNLPPNLCHPSYLAEQ-AKELGKAHKALKVE 219
Query: 695 SIDGTKYP-LMAAVNRAASVIERHDGRVVKFEYDSKDQVEETIFLVGKGITYDTGGADVK 871
+D K L A R++ Y + ++ LVGKGIT+DTGG +K
Sbjct: 220 VLDEKKIKDLGMGAFYAVGQGSDQPPRLIVLNYQGGKKADKPFVLVGKGITFDTGGISLK 279
Query: 872 AGGHMAGMHRDKCGAAAVTG 931
G M M D CGAA+V G
Sbjct: 280 PGAGMDEMKYDMCGAASVFG 299
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,798,030
Number of Sequences: 369166
Number of extensions: 2107425
Number of successful extensions: 5498
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5482
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9558791870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)