Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_006_N14
(844 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q02645|HTS_DROME Hu-li tai shao protein (Adducin-like pr... 86 2e-16
sp|Q9U9K0|ADD1_CAEEL Adducin-related protein 1 69 2e-11
sp|Q05764|ADDB_RAT Beta-adducin (Erythrocyte adducin beta s... 58 3e-08
sp|Q9QYB8|ADDB_MOUSE Beta-adducin (Erythrocyte adducin beta... 57 5e-08
sp|Q9QYC0|ADDA_MOUSE Alpha-adducin (Erythrocyte adducin alp... 56 1e-07
sp|Q63028|ADDA_RAT Alpha-adducin (Erythrocyte adducin alpha... 56 1e-07
sp|P35611|ADDA_HUMAN Alpha-adducin (Erythrocyte adducin alp... 55 2e-07
sp|P35612|ADDB_HUMAN Beta-adducin (Erythrocyte adducin beta... 52 2e-06
sp|Q9UUG8|TUP12_SCHPO Transcriptional repressor tup12 35 0.34
sp|Q95141|INAR2_BOVIN Interferon-alpha/beta receptor beta c... 34 0.58
>sp|Q02645|HTS_DROME Hu-li tai shao protein (Adducin-like protein)
Length = 1156
Score = 85.5 bits (210), Expect = 2e-16
Identities = 44/108 (40%), Positives = 65/108 (60%), Gaps = 2/108 (1%)
Frame = +1
Query: 16 PNQFAPQGHDKHELKHQQQKVKGKYFRDETSAGHQSRVLRNV--DQTSEVDGVPDEESVG 189
P QF P G + E K QQ +K D+ SAG QS +L V D+ S + ++
Sbjct: 490 PLQFVPAGTNpreFKRVQQLIKDNRRADKISAGPQSHILEGVTWDEASRLKDATVSQAGD 549
Query: 190 RVVLVGAVSRGIIDKRHRHDPSVYQSCFSPNPFDRVTDDDLKQYKRKV 333
VV++GA S+GII + +H+ +VY++ ++ NPFD VTDD+L +YKR V
Sbjct: 550 HVVMMGAASKGIIQRGFQHNATVYKAPYAKNPFDNVTDDELNEYKRTV 597
>sp|Q9U9K0|ADD1_CAEEL Adducin-related protein 1
Length = 732
Score = 68.6 bits (166), Expect = 2e-11
Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 8/112 (7%)
Frame = +1
Query: 10 TSPNQFAPQGHDKHELKHQQQKVKGKYFRDETSAGHQSRVLRNVDQTS-------EVDGV 168
+S +QF+P + E K +Q+ +K SAG QS++L +V + DG
Sbjct: 471 SSVHQFSPASSNPKEFKEKQKAIKENNRLGTLSAGPQSQILDSVTYEDIALLIKPDNDGT 530
Query: 169 PDEESVG-RVVLVGAVSRGIIDKRHRHDPSVYQSCFSPNPFDRVTDDDLKQY 321
+ S R +L+G S+GIID++ +H VY ++PNPF TD D+K+Y
Sbjct: 531 VGQSSTADRAILIGTASKGIIDRQFQHHAQVYHQIYAPNPFSVETDADIKKY 582
>sp|Q05764|ADDB_RAT Beta-adducin (Erythrocyte adducin beta subunit) (Adducin 63)
Length = 725
Score = 58.2 bits (139), Expect = 3e-08
Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 1/143 (0%)
Frame = +1
Query: 13 SPNQFAPQGHDKHELKHQQQKVKGKYFRDETSAGHQSRVLRNVDQTSEVDGVPDEESVGR 192
+PNQF P D E+ + K++ + +D SAG QS++L +V +E P ES
Sbjct: 481 NPNQFVPLYTDPQEVLDMRNKIREQNRQDIKSAGPQSQLLASV--IAEKSRSPSTES--- 535
Query: 193 VVLVGAVSRGIIDKRHRHDPSVYQSCFSPNPFDRVTDDDLKQYKRKVLGLPPDEIETSKQ 372
S+G D + + +V PNPF ++TD +L++YK++V ++ + ++
Sbjct: 536 ----QLASKGDADTKDELEETV------PNPFSQLTDQELEEYKKEVERKKLEQEQEGEK 585
Query: 373 EVSFTEP-SVTDTNISSPVDKPT 438
+ + EP S + +SPV PT
Sbjct: 586 DAATEEPGSPVKSTPASPVQSPT 608
>sp|Q9QYB8|ADDB_MOUSE Beta-adducin (Erythrocyte adducin beta subunit) (Add97)
Length = 725
Score = 57.4 bits (137), Expect = 5e-08
Identities = 40/143 (27%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
Frame = +1
Query: 13 SPNQFAPQGHDKHELKHQQQKVKGKYFRDETSAGHQSRVLRNVDQTSEVDGVPDEESVGR 192
+PNQF P D E+ + K++ + +D SAG QS++L +V +E P ES
Sbjct: 481 NPNQFVPLYTDPQEVLDMRNKIREQNRQDIKSAGPQSQLLASV--IAEKSRSPSTES--- 535
Query: 193 VVLVGAVSRGIIDKRHRHDPSVYQSCFSPNPFDRVTDDDLKQYKRKVLGLPPDEIETSKQ 372
+S+G D + + +V PNPF ++TD +L++YK++V ++ + ++
Sbjct: 536 ----QLMSKGDADTKDESEETV------PNPFSQLTDQELEEYKKEVERKKLEQEQEGEK 585
Query: 373 EVSFTEP-SVTDTNISSPVDKPT 438
+++ +P S + +SPV P+
Sbjct: 586 DIATEKPGSPVKSTPASPVQSPS 608
>sp|Q9QYC0|ADDA_MOUSE Alpha-adducin (Erythrocyte adducin alpha subunit)
Length = 735
Score = 56.2 bits (134), Expect = 1e-07
Identities = 45/147 (30%), Positives = 75/147 (51%), Gaps = 6/147 (4%)
Frame = +1
Query: 4 TCTSPNQFAPQGHDKHELKHQQQKVKGKYFRDETSAGHQSRVLRNVDQTSEVDGVPDEES 183
T PN F P + E++ + K++ + +D +AG QS+VL GV + S
Sbjct: 482 TSAVPNLFVPLNTNPKEVQEMRNKIREQNLQDIKTAGPQSQVLC---------GVMMDRS 532
Query: 184 VGRVVLVGAVSRGIIDKRHRHDPSVYQSCFSPNPFDRVTDDDLKQYKRKVLGLPP----- 348
+ + LV A S+ II+K ++ P V S PNPF+ +TD +L++Y+R+V
Sbjct: 533 LVQGELVTA-SKAIIEKEYQ--PHVIVSTTGPNPFNTLTDRELEEYRREVERKQKGSEEN 589
Query: 349 -DEIETSKQEVSFTEPSVTDTNISSPV 426
DE K++ + +V +T S+PV
Sbjct: 590 LDETREQKEKSPPDQSAVPNTPPSTPV 616
>sp|Q63028|ADDA_RAT Alpha-adducin (Erythrocyte adducin alpha subunit)
Length = 735
Score = 56.2 bits (134), Expect = 1e-07
Identities = 45/147 (30%), Positives = 75/147 (51%), Gaps = 6/147 (4%)
Frame = +1
Query: 4 TCTSPNQFAPQGHDKHELKHQQQKVKGKYFRDETSAGHQSRVLRNVDQTSEVDGVPDEES 183
T PN F P + E++ + K++ + +D +AG QS+VL GV + S
Sbjct: 482 TSAVPNLFVPLNTNPKEVQEMRNKIREQNLQDIKTAGPQSQVLC---------GVMMDRS 532
Query: 184 VGRVVLVGAVSRGIIDKRHRHDPSVYQSCFSPNPFDRVTDDDLKQYKRKVLGLPP----- 348
+ + LV A S+ II+K ++ P V S PNPF+ +TD +L++Y+R+V
Sbjct: 533 LVQGELVTA-SKAIIEKEYQ--PHVIVSTTGPNPFNTLTDRELEEYRREVERKQKGSEEN 589
Query: 349 -DEIETSKQEVSFTEPSVTDTNISSPV 426
DE K++ + +V +T S+PV
Sbjct: 590 LDETREQKEKSPPDQSAVPNTPPSTPV 616
>sp|P35611|ADDA_HUMAN Alpha-adducin (Erythrocyte adducin alpha subunit)
Length = 737
Score = 55.1 bits (131), Expect = 2e-07
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 6/147 (4%)
Frame = +1
Query: 4 TCTSPNQFAPQGHDKHELKHQQQKVKGKYFRDETSAGHQSRVLRNVDQTSEVDGVPDEES 183
T PN F P + E++ + K++ + +D +AG QS+VL GV + S
Sbjct: 482 TSAVPNLFVPLNTNPKEVQEMRNKIREQNLQDIKTAGPQSQVLC---------GVVMDRS 532
Query: 184 VGRVVLVGAVSRGIIDKRHRHDPSVYQSCFSPNPFDRVTDDDLKQYKRKVLGLPP----- 348
+ + LV A S+ II+K ++ P V S PNPF +TD +L++Y+R+V
Sbjct: 533 LVQGELVTA-SKAIIEKEYQ--PHVIVSTTGPNPFTTLTDRELEEYRREVERKQKGSEEN 589
Query: 349 -DEIETSKQEVSFTEPSVTDTNISSPV 426
DE K++ +P+V S+P+
Sbjct: 590 LDEAREQKEKSPPDQPAVPHPPPSTPI 616
>sp|P35612|ADDB_HUMAN Beta-adducin (Erythrocyte adducin beta subunit)
Length = 726
Score = 52.4 bits (124), Expect = 2e-06
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 4/141 (2%)
Frame = +1
Query: 13 SPNQFAPQGHDKHELKHQQQKVKGKYFRDETSAGHQSRVLRNVDQTSEVDGVPDEESVGR 192
+PNQF P D E+ + K++ + +D SAG QS++L +V +E P ES
Sbjct: 481 NPNQFVPLYTDPQEVLEMRNKIREQNRQDVKSAGPQSQLLASV--IAEKSRSPSTES--- 535
Query: 193 VVLVGAVSRGIIDKRHRHDPSVYQSCFSPNPFDRVTDDDLKQYK----RKVLGLPPDEIE 360
+S+G D + + +V PNPF ++TD +L++YK RK L L E E
Sbjct: 536 ----QLMSKGDEDTKDDSEETV------PNPFSQLTDQELEEYKKEVERKKLEL-DGEKE 584
Query: 361 TSKQEVSFTEPSVTDTNISSP 423
T+ +E S + + SP
Sbjct: 585 TAPEEPGSPAKSAPASPVQSP 605
>sp|Q9UUG8|TUP12_SCHPO Transcriptional repressor tup12
Length = 586
Score = 34.7 bits (78), Expect = 0.34
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Frame = +1
Query: 100 ETSAGHQSRVLRNVDQTSEVDGVPDEE-----SVGRVVLVGAVSRGIIDKRHRHDPSVYQ 264
+ AG Q +L D + V PD + S+ +V+ + S ++++ H H+ SVY
Sbjct: 404 DVEAGEQKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWTSSGTLVEQLHGHEESVYS 463
Query: 265 SCFSPN 282
FSP+
Sbjct: 464 VAFSPD 469
>sp|Q95141|INAR2_BOVIN Interferon-alpha/beta receptor beta chain precursor (IFN-alpha-REC)
(Type I interferon receptor) (IFN-R) (Interferon
alpha/beta receptor-2)
Length = 530
Score = 33.9 bits (76), Expect = 0.58
Identities = 40/151 (26%), Positives = 59/151 (39%), Gaps = 5/151 (3%)
Frame = +1
Query: 1 ETCTSPNQFAPQ-GHDKHELKHQQQKVKGKYFRDETSAGHQSRVLRNVDQTSEVDGVPDE 177
E C+ P+ P K + + G + + TS G+Q+R D TSE D E
Sbjct: 365 EDCSEPSAEEPYLPEPKGDAETPMAPGPGLWQSEGTSGGYQTRGTLWQDPTSEEDSDSTE 424
Query: 178 ESVGRVV----LVGAVSRGIIDKRHRHDPSVYQSCFSPNPFDRVTDDDLKQYKRKVLGLP 345
S GR+V L R + D + + SC P + V +DL + + VL
Sbjct: 425 GSEGRIVFNVNLNSVCVRALEDDKDSEVTLMSPSC----PEETVELEDLNETESSVL--- 477
Query: 346 PDEIETSKQEVSFTEPSVTDTNISSPVDKPT 438
++ FT PS T P D P+
Sbjct: 478 --VASEEGTQLPFTNPS---TECPRPQDAPS 503
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.315 0.131 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,220,037
Number of Sequences: 369166
Number of extensions: 1208969
Number of successful extensions: 3476
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3468
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8245425915
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)