Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_006_M09
(865 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q63009|ANM1_RAT Protein arginine N-methyltransferase 1 407 e-113
sp|Q9JIF0|ANM1_MOUSE Protein arginine N-methyltransferase 1 407 e-113
sp|Q99873|ANM1_HUMAN Protein arginine N-methyltransferase 1... 406 e-113
sp|Q6PAK3|ANM4_MOUSE Protein arginine N-methyltransferase 4... 394 e-109
sp|Q9NR22|ANM4_HUMAN Protein arginine N-methyltransferase 4... 394 e-109
sp|Q9URX7|ANM1_SCHPO Probable protein arginine N-methyltran... 304 2e-82
sp|P38074|HMT1_YEAST HNRNP arginine N-methyltransferase (OD... 271 2e-72
sp|O60678|ANM3_HUMAN Protein arginine N-methyltransferase 3... 263 4e-70
sp|O70467|ANM3_RAT Protein arginine N-methyltransferase 3 (... 258 2e-68
sp|Q922H1|ANM3_MOUSE Protein arginine N-methyltransferase 3... 251 2e-66
>sp|Q63009|ANM1_RAT Protein arginine N-methyltransferase 1
Length = 353
Score = 407 bits (1045), Expect = e-113
Identities = 191/271 (70%), Positives = 228/271 (84%)
Frame = +3
Query: 48 DASDMTSKDYYFDSYAHFGIHEEMLKDEVRTLTYRNALYHNKHXXXXXXXXXXGCGTGIL 227
+A DMTSKDYYFDSYAHFGIHEEMLKDEVRTLTYRN+++HN+H G GTGIL
Sbjct: 25 NAEDMTSKDYYFDSYAHFGIHEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGIL 84
Query: 228 CMFAVKAGAKKVIGIDCSNIIDYAKEIIKANKMEDKITLIKGKVEEVELPEDVLKVDIII 407
CMFA KAGA+KVIGI+CS+I DYA +I+KANK++ +T+IKGKVEEVELP V KVDIII
Sbjct: 85 CMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELP--VEKVDIII 142
Query: 408 SEWMGYCLFYESMLNTVLFARDKWLKTGGIIMPDKATLHLCAIEDRQYKDEKINWWENVY 587
SEWMGYCLFYESMLNTVL ARDKWL G+I PD+ATL++ AIEDRQYKD KI+WWENVY
Sbjct: 143 SEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPDRATLYVTAIEDRQYKDYKIHWWENVY 202
Query: 588 GFDMSCIRKVAVSEPLVDVVNPNQIVSNFCIVKEVNMYEIKVEDLSFSSPFTLAVRKNDY 767
GFDMSCI+ VA+ EPLVDVV+P Q+V+N C++KEV++Y +KVEDL+F+SPF L V++NDY
Sbjct: 203 GFDMSCIKDVAIKEPLVDVVDPKQLVTNACLIKEVDIYTVKVEDLTFTSPFCLQVKRNDY 262
Query: 768 IHALVAFFNIDFTSSHKHIGFSTGPKRSSRH 860
+HALVA+FNI+FT HK GFST P+ H
Sbjct: 263 VHALVAYFNIEFTRCHKRTGFSTSPESPYTH 293
>sp|Q9JIF0|ANM1_MOUSE Protein arginine N-methyltransferase 1
Length = 371
Score = 407 bits (1045), Expect = e-113
Identities = 191/271 (70%), Positives = 228/271 (84%)
Frame = +3
Query: 48 DASDMTSKDYYFDSYAHFGIHEEMLKDEVRTLTYRNALYHNKHXXXXXXXXXXGCGTGIL 227
+A DMTSKDYYFDSYAHFGIHEEMLKDEVRTLTYRN+++HN+H G GTGIL
Sbjct: 43 NAEDMTSKDYYFDSYAHFGIHEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGIL 102
Query: 228 CMFAVKAGAKKVIGIDCSNIIDYAKEIIKANKMEDKITLIKGKVEEVELPEDVLKVDIII 407
CMFA KAGA+KVIGI+CS+I DYA +I+KANK++ +T+IKGKVEEVELP V KVDIII
Sbjct: 103 CMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELP--VEKVDIII 160
Query: 408 SEWMGYCLFYESMLNTVLFARDKWLKTGGIIMPDKATLHLCAIEDRQYKDEKINWWENVY 587
SEWMGYCLFYESMLNTVL ARDKWL G+I PD+ATL++ AIEDRQYKD KI+WWENVY
Sbjct: 161 SEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPDRATLYVTAIEDRQYKDYKIHWWENVY 220
Query: 588 GFDMSCIRKVAVSEPLVDVVNPNQIVSNFCIVKEVNMYEIKVEDLSFSSPFTLAVRKNDY 767
GFDMSCI+ VA+ EPLVDVV+P Q+V+N C++KEV++Y +KVEDL+F+SPF L V++NDY
Sbjct: 221 GFDMSCIKDVAIKEPLVDVVDPKQLVTNACLIKEVDIYTVKVEDLTFTSPFCLQVKRNDY 280
Query: 768 IHALVAFFNIDFTSSHKHIGFSTGPKRSSRH 860
+HALVA+FNI+FT HK GFST P+ H
Sbjct: 281 VHALVAYFNIEFTRCHKRTGFSTSPESPYTH 311
>sp|Q99873|ANM1_HUMAN Protein arginine N-methyltransferase 1 (Interferon receptor 1-bound
protein 4)
Length = 361
Score = 406 bits (1044), Expect = e-113
Identities = 191/271 (70%), Positives = 228/271 (84%)
Frame = +3
Query: 48 DASDMTSKDYYFDSYAHFGIHEEMLKDEVRTLTYRNALYHNKHXXXXXXXXXXGCGTGIL 227
+A DMTSKDYYFDSYAHFGIHEEMLKDEVRTLTYRN+++HN+H G GTGIL
Sbjct: 33 NAEDMTSKDYYFDSYAHFGIHEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGIL 92
Query: 228 CMFAVKAGAKKVIGIDCSNIIDYAKEIIKANKMEDKITLIKGKVEEVELPEDVLKVDIII 407
CMFA KAGA+KVIGI CS+I DYA +I+KANK++ +T+IKGKVEEVELP V KVDIII
Sbjct: 93 CMFAAKAGARKVIGIVCSSISDYAVKIVKANKLDHVVTIIKGKVEEVELP--VEKVDIII 150
Query: 408 SEWMGYCLFYESMLNTVLFARDKWLKTGGIIMPDKATLHLCAIEDRQYKDEKINWWENVY 587
SEWMGYCLFYESMLNTVL+ARDKWL G+I PD+ATL++ AIEDRQYKD KI+WWENVY
Sbjct: 151 SEWMGYCLFYESMLNTVLYARDKWLAPDGLIFPDRATLYVTAIEDRQYKDYKIHWWENVY 210
Query: 588 GFDMSCIRKVAVSEPLVDVVNPNQIVSNFCIVKEVNMYEIKVEDLSFSSPFTLAVRKNDY 767
GFDMSCI+ VA+ EPLVDVV+P Q+V+N C++KEV++Y +KVEDL+F+SPF L V++NDY
Sbjct: 211 GFDMSCIKDVAIKEPLVDVVDPKQLVTNACLIKEVDIYTVKVEDLTFTSPFCLQVKRNDY 270
Query: 768 IHALVAFFNIDFTSSHKHIGFSTGPKRSSRH 860
+HALVA+FNI+FT HK GFST P+ H
Sbjct: 271 VHALVAYFNIEFTRCHKRTGFSTSPESPYTH 301
>sp|Q6PAK3|ANM4_MOUSE Protein arginine N-methyltransferase 4 (Heterogeneous nuclear
ribonucleoprotein methyltransferase-like protein 4)
Length = 394
Score = 394 bits (1013), Expect = e-109
Identities = 183/272 (67%), Positives = 225/272 (82%)
Frame = +3
Query: 45 IDASDMTSKDYYFDSYAHFGIHEEMLKDEVRTLTYRNALYHNKHXXXXXXXXXXGCGTGI 224
++ +MTS+DYYFDSYAHFGIHEEMLKDEVRTLTYRN++YHNKH G GTGI
Sbjct: 65 LNPEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYRNSMYHNKHVFKDKVVLDVGSGTGI 124
Query: 225 LCMFAVKAGAKKVIGIDCSNIIDYAKEIIKANKMEDKITLIKGKVEEVELPEDVLKVDII 404
L MFA KAGAKKV GI+CS+I DY+++IIKAN +++ IT+ KGKVEEVELP V KVDII
Sbjct: 125 LSMFAAKAGAKKVFGIECSSISDYSEKIIKANHLDNVITIFKGKVEEVELP--VEKVDII 182
Query: 405 ISEWMGYCLFYESMLNTVLFARDKWLKTGGIIMPDKATLHLCAIEDRQYKDEKINWWENV 584
ISEWMGYCLFYESMLNTV+FARDKWLK GG++ PD+A L++ AIEDRQYKD KI+WWENV
Sbjct: 183 ISEWMGYCLFYESMLNTVIFARDKWLKPGGLMFPDRAALYVVAIEDRQYKDFKIHWWENV 242
Query: 585 YGFDMSCIRKVAVSEPLVDVVNPNQIVSNFCIVKEVNMYEIKVEDLSFSSPFTLAVRKND 764
YGFDM+CIR VA+ EPLVD+V+P Q+V+N C++KEV++Y +K E+LSF+S F L +++ND
Sbjct: 243 YGFDMTCIRDVAMKEPLVDIVDPKQVVTNACLIKEVDIYTVKTEELSFTSAFCLQIQRND 302
Query: 765 YIHALVAFFNIDFTSSHKHIGFSTGPKRSSRH 860
Y+HALV +FNI+FT HK +GFST P H
Sbjct: 303 YVHALVTYFNIEFTKCHKKMGFSTAPDAPYTH 334
>sp|Q9NR22|ANM4_HUMAN Protein arginine N-methyltransferase 4 (Heterogeneous nuclear
ribonucleoprotein methyltransferase-like protein 4)
Length = 334
Score = 394 bits (1012), Expect = e-109
Identities = 183/272 (67%), Positives = 225/272 (82%)
Frame = +3
Query: 45 IDASDMTSKDYYFDSYAHFGIHEEMLKDEVRTLTYRNALYHNKHXXXXXXXXXXGCGTGI 224
++ +MTS+DYYFDSYAHFGIHEEMLKDEVRTLTYRN++YHNKH G GTGI
Sbjct: 5 LNPEEMTSRDYYFDSYAHFGIHEEMLKDEVRTLTYRNSMYHNKHVFKDKVVLDVGSGTGI 64
Query: 225 LCMFAVKAGAKKVIGIDCSNIIDYAKEIIKANKMEDKITLIKGKVEEVELPEDVLKVDII 404
L MFA KAGAKKV GI+CS+I DY+++IIKAN +++ IT+ KGKVEEVELP V KVDII
Sbjct: 65 LSMFAAKAGAKKVFGIECSSISDYSEKIIKANHLDNIITIFKGKVEEVELP--VEKVDII 122
Query: 405 ISEWMGYCLFYESMLNTVLFARDKWLKTGGIIMPDKATLHLCAIEDRQYKDEKINWWENV 584
ISEWMGYCLFYESMLNTV+FARDKWLK GG++ PD+A L++ AIEDRQYKD KI+WWENV
Sbjct: 123 ISEWMGYCLFYESMLNTVIFARDKWLKPGGLMFPDRAALYVVAIEDRQYKDFKIHWWENV 182
Query: 585 YGFDMSCIRKVAVSEPLVDVVNPNQIVSNFCIVKEVNMYEIKVEDLSFSSPFTLAVRKND 764
YGFDM+CIR VA+ EPLVD+V+P Q+V+N C++KEV++Y +K E+LSF+S F L +++ND
Sbjct: 183 YGFDMTCIRDVAMKEPLVDIVDPKQVVTNACLIKEVDIYTVKTEELSFTSAFCLQIQRND 242
Query: 765 YIHALVAFFNIDFTSSHKHIGFSTGPKRSSRH 860
Y+HALV +FNI+FT HK +GFST P H
Sbjct: 243 YVHALVTYFNIEFTKCHKKMGFSTAPDAPYTH 274
>sp|Q9URX7|ANM1_SCHPO Probable protein arginine N-methyltransferase
Length = 339
Score = 304 bits (778), Expect = 2e-82
Identities = 144/263 (54%), Positives = 196/263 (74%)
Frame = +3
Query: 54 SDMTSKDYYFDSYAHFGIHEEMLKDEVRTLTYRNALYHNKHXXXXXXXXXXGCGTGILCM 233
S +T+KDYYFDSY+H+GIHEEMLKD+VRTL+YR+A+ N H GCGTGIL M
Sbjct: 11 SGLTAKDYYFDSYSHWGIHEEMLKDDVRTLSYRDAIMQNPHLFRDKIVLDVGCGTGILSM 70
Query: 234 FAVKAGAKKVIGIDCSNIIDYAKEIIKANKMEDKITLIKGKVEEVELPEDVLKVDIIISE 413
F +AGAK V G+D S II A +I++ NK+ D+ITLI+GK+EE++LP V KVDII+SE
Sbjct: 71 FCARAGAKHVYGVDMSEIIHKAVQIVEVNKLSDRITLIQGKMEEIQLP--VEKVDIIVSE 128
Query: 414 WMGYCLFYESMLNTVLFARDKWLKTGGIIMPDKATLHLCAIEDRQYKDEKINWWENVYGF 593
WMGY L YESML+TVL ARD++L G++ PD+A + L AIED YK EKI +W++VYGF
Sbjct: 129 WMGYFLLYESMLDTVLVARDRYLAPDGLLFPDRAQIQLAAIEDADYKSEKIGFWDDVYGF 188
Query: 594 DMSCIRKVAVSEPLVDVVNPNQIVSNFCIVKEVNMYEIKVEDLSFSSPFTLAVRKNDYIH 773
D S I+K EPLVD V+ + +N C++ ++++ +K EDL+FSSPF + +ND++H
Sbjct: 189 DFSPIKKDVWKEPLVDTVDRIAVNTNSCVILDLDLKTVKKEDLAFSSPFEITATRNDFVH 248
Query: 774 ALVAFFNIDFTSSHKHIGFSTGP 842
A +A+F+I+F++ HK I FSTGP
Sbjct: 249 AFLAWFDIEFSACHKPIKFSTGP 271
>sp|P38074|HMT1_YEAST HNRNP arginine N-methyltransferase (ODP1 protein)
Length = 348
Score = 271 bits (692), Expect = 2e-72
Identities = 137/285 (48%), Positives = 191/285 (67%), Gaps = 3/285 (1%)
Frame = +3
Query: 15 MEHASVNGDAIDASDMT-SKDYYFDSYAHFGIHEEMLKDEVRTLTYRNALYHNKHXXXXX 191
M +V A + + ++ S+ +YF+SY H+GIHEEML+D VRTL+YRNA+ NK
Sbjct: 1 MSKTAVKDSATEKTKLSESEQHYFNSYDHYGIHEEMLQDTVRTLSYRNAIIQNKDLFKDK 60
Query: 192 XXXXXGCGTGILCMFAVKAGAKKVIGIDCSNIIDYAKEIIKANKMEDKITLIKGKVEEVE 371
GCGTGIL MFA K GAK VIG+D S+II+ AKE+++ N DKITL++GK+E+V
Sbjct: 61 IVLDVGCGTGILSMFAAKHGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVH 120
Query: 372 LPEDVLKVDIIISEWMGYCLFYESMLNTVLFARDKWLKTGGIIMPDKATLHLCAIEDRQY 551
LP KVDIIISEWMGY L YESM++TVL+ARD +L GG+I PDK ++HL +ED QY
Sbjct: 121 LPFP--KVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFPDKCSIHLAGLEDSQY 178
Query: 552 KDEKINWWENVYGFDMSCIRKVAVSEPLVDVVNPNQIVSNFCIVKEVNMYEIKVEDLSFS 731
KDEK+N+W++VYGFD S + + EP+VD V N + + + E ++ +K+ DL+F
Sbjct: 179 KDEKLNYWQDVYGFDYSPFVPLVLHEPIVDTVERNNVNTTSDKLIEFDLNTVKISDLAFK 238
Query: 732 SPFTLAVRKNDYIHALVAFFNIDFTS--SHKHIGFSTGPKRSSRH 860
S F L ++ D I+ +V +F+I F + + + FSTGP H
Sbjct: 239 SNFKLTAKRQDMINGIVTWFDIVFPAPKGKRPVEFSTGPHAPYTH 283
>sp|O60678|ANM3_HUMAN Protein arginine N-methyltransferase 3 (Heterogeneous nuclear
ribonucleoprotein methyltransferase-like protein 3)
Length = 531
Score = 263 bits (673), Expect = 4e-70
Identities = 127/262 (48%), Positives = 179/262 (68%), Gaps = 1/262 (0%)
Frame = +3
Query: 78 YFDSYAHFGIHEEMLKDEVRTLTYRNALYHNKHXXXXXXXXXXGCGTGILCMFAVKAGAK 257
YF SY H+GIHEEMLKD++RT +YR+ +Y N H GCGTGIL MFA KAGAK
Sbjct: 220 YFSSYGHYGIHEEMLKDKIRTESYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAK 279
Query: 258 KVIGIDCSNIIDYAKEIIKANKMEDKITLIKGKVEEVELPEDVLKVDIIISEWMGYCLFY 437
KV+G+D S I+ A +II+ NK+ED ITLIKGK+EEV LP V KVD+IISEWMGY L +
Sbjct: 280 KVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLP--VEKVDVIISEWMGYFLLF 337
Query: 438 ESMLNTVLFARDKWLKTGGIIMPDKATLHLCAIEDRQYKDEKINWWENVYGFDMSCIRKV 617
ESML++VL+A++K+L GG + PD T+ L A+ D ++I +W++VYGF MSC++K
Sbjct: 338 ESMLDSVLYAKNKYLAKGGSVYPDICTISLVAVSDVNKHADRIAFWDDVYGFKMSCMKKA 397
Query: 618 AVSEPLVDVVNPNQIVSNFCIVKEVNMYEIKVEDLSFSSPFTLAVRKNDYIHALVAFFNI 797
+ E +V+V++P ++S C +K ++ + + DL FSS FTL + + A+ +F+I
Sbjct: 398 VIPEAVVEVLDPKTLISEPCGIKHIDCHTTSISDLEFSSDFTLKITRTSMCTAIAGYFDI 457
Query: 798 DFTSS-HKHIGFSTGPKRSSRH 860
F + H + FSTGP+ + H
Sbjct: 458 YFEKNCHNRVVFSTGPQSTKTH 479
>sp|O70467|ANM3_RAT Protein arginine N-methyltransferase 3 (Heterogeneous nuclear
ribonucleoprotein methyltransferase-like protein 3)
Length = 528
Score = 258 bits (659), Expect = 2e-68
Identities = 128/262 (48%), Positives = 176/262 (67%), Gaps = 1/262 (0%)
Frame = +3
Query: 78 YFDSYAHFGIHEEMLKDEVRTLTYRNALYHNKHXXXXXXXXXXGCGTGILCMFAVKAGAK 257
YF SY H+GIHEEMLKD+VRT +YR+ +Y N H GCGTGIL MFA KAGAK
Sbjct: 217 YFSSYGHYGIHEEMLKDKVRTESYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAK 276
Query: 258 KVIGIDCSNIIDYAKEIIKANKMEDKITLIKGKVEEVELPEDVLKVDIIISEWMGYCLFY 437
KVI +D S I+ A +II+ NK+ED I LIKGK+EEV LP V KVD+IISEWMGY L +
Sbjct: 277 KVIAVDQSEILYQAMDIIRLNKLEDTIVLIKGKIEEVSLP--VEKVDVIISEWMGYFLLF 334
Query: 438 ESMLNTVLFARDKWLKTGGIIMPDKATLHLCAIEDRQYKDEKINWWENVYGFDMSCIRKV 617
ESML++VL+A+ K+L GG + PD T+ L A+ D ++I +W++VYGF+MSC++K
Sbjct: 335 ESMLDSVLYAKSKYLAKGGSVYPDICTISLVAVSDVSKHADRIAFWDDVYGFNMSCMKKA 394
Query: 618 AVSEPLVDVVNPNQIVSNFCIVKEVNMYEIKVEDLSFSSPFTLAVRKNDYIHALVAFFNI 797
+ E +V+VV+ ++S+ C +K ++ + + DL FSS FTL K A+ +F+I
Sbjct: 395 VIPEAVVEVVDHKTLISDPCDIKHIDCHTTSISDLEFSSDFTLRTTKTAMCTAVAGYFDI 454
Query: 798 DFTSS-HKHIGFSTGPKRSSRH 860
F + H + FSTGP+ + H
Sbjct: 455 YFEKNCHNRVVFSTGPQSTKTH 476
>sp|Q922H1|ANM3_MOUSE Protein arginine N-methyltransferase 3 (Heterogeneous nuclear
ribonucleoprotein methyltransferase-like protein 3)
Length = 532
Score = 251 bits (640), Expect = 2e-66
Identities = 127/266 (47%), Positives = 175/266 (65%), Gaps = 5/266 (1%)
Frame = +3
Query: 78 YFDSYAHFGIHEEMLKDEVRTLTYRNALYHNKHXXXXXXXXXXGCGTGILCMFAVKAGAK 257
YF SY H+GIHEEMLKD+VRT +YR+ +Y N H GCGTGIL MFA K GAK
Sbjct: 217 YFSSYGHYGIHEEMLKDKVRTESYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKVGAK 276
Query: 258 KVIGIDCSNIIDYAKEIIKANKMEDKITLIKGKVEEVELPEDVLKVDIIISEWMGYCLFY 437
KVI +D S I+ A +II+ NK+ED I LIKGK+EEV LP V KVD+IISEWMGY L +
Sbjct: 277 KVIAVDQSEILYQAMDIIRLNKLEDTIVLIKGKIEEVSLP--VEKVDVIISEWMGYFLLF 334
Query: 438 ESMLNTVLFARDKWLKTGGIIMPDKATLHLCAIEDRQYKDEKINWWENVYGFDMSCIRKV 617
ESML++VL+A+ K+L GG + PD T+ L A+ D ++I +W++VYGF+MSC++K
Sbjct: 335 ESMLDSVLYAKSKYLAKGGSVYPDICTISLVAVSDVSKHADRIAFWDDVYGFNMSCMKKA 394
Query: 618 AVSEPLVDVVNPNQIVSNFCIV----KEVNMYEIKVEDLSFSSPFTLAVRKNDYIHALVA 785
+ E +V+VV+ ++S+ C + K ++ + + DL FSS FTL K A+
Sbjct: 395 VIPEAVVEVVDHKTLISDPCDIKMDGKHIDCHTTSISDLEFSSDFTLRTTKTAMCTAVAG 454
Query: 786 FFNIDFTSS-HKHIGFSTGPKRSSRH 860
+F+I F + H + FSTGP+ + H
Sbjct: 455 YFDIYFEKNCHNRVVFSTGPQSTKTH 480
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,327,875
Number of Sequences: 369166
Number of extensions: 1665439
Number of successful extensions: 4574
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4545
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8582957970
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)