Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_006_K24
(104 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P25776|ORYA_ORYSA Oryzain alpha chain precursor 37 0.011
sp|Q7XR52|CYSP1_ORYSA Cysteine protease 1 precursor (OsCP1) 36 0.024
sp|Q94504|CYSP7_DICDI Cysteine proteinase 7 precursor (Prot... 35 0.040
sp|P43297|RD21A_ARATH Cysteine proteinase RD21a precursor (... 35 0.052
sp|Q24940|CATLP_FASHE Cathepsin L-like proteinase precursor 35 0.069
sp|P25777|ORYB_ORYSA Oryzain beta chain precursor 35 0.069
sp|P54639|CYSP4_DICDI Cysteine proteinase 4 precursor 34 0.090
sp|Q9LT77|CPR1_ARATH Putative cysteine proteinase At3g19400... 34 0.090
sp|P04989|CYSP2_DICDI Cysteine proteinase 2 precursor (Pres... 34 0.12
sp|O65493|XCP1_ARATH Xylem cysteine proteinase 1 precursor ... 34 0.12
>sp|P25776|ORYA_ORYSA Oryzain alpha chain precursor
Length = 458
Score = 37.4 bits (85), Expect = 0.011
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Frame = +1
Query: 1 LGLNHFADMTNEEFRAKYLSV---PPSRKKISTVFMA 102
LGLN FAD+TNEE+R YL + P +K+S ++A
Sbjct: 87 LGLNRFADLTNEEYRDTYLGLRNKPRRERKVSDRYLA 123
>sp|Q7XR52|CYSP1_ORYSA Cysteine protease 1 precursor (OsCP1)
Length = 490
Score = 36.2 bits (82), Expect = 0.024
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +1
Query: 1 LGLNHFADMTNEEFRAKYLSVPPS 72
LG+N FAD+TN EFRA YL P+
Sbjct: 114 LGMNRFADLTNGEFRATYLGTTPA 137
>sp|Q94504|CYSP7_DICDI Cysteine proteinase 7 precursor (Proteinase 1)
Length = 460
Score = 35.4 bits (80), Expect = 0.040
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +1
Query: 1 LGLNHFADMTNEEFRAKYLSVP 66
LGLN FAD++NEE+RA YL P
Sbjct: 72 LGLNVFADISNEEYRATYLGTP 93
>sp|P43297|RD21A_ARATH Cysteine proteinase RD21a precursor (RD21)
Length = 462
Score = 35.0 bits (79), Expect = 0.052
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +1
Query: 1 LGLNHFADMTNEEFRAKYLSVPPSRK 78
LGL FAD+TN+E+R+KYL +K
Sbjct: 95 LGLTRFADLTNDEYRSKYLGAKMEKK 120
>sp|Q24940|CATLP_FASHE Cathepsin L-like proteinase precursor
Length = 326
Score = 34.7 bits (78), Expect = 0.069
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +1
Query: 1 LGLNHFADMTNEEFRAKYLS 60
LGLN F DMT EEF+AKYL+
Sbjct: 67 LGLNQFTDMTFEEFKAKYLT 86
>sp|P25777|ORYB_ORYSA Oryzain beta chain precursor
Length = 471
Score = 34.7 bits (78), Expect = 0.069
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +1
Query: 1 LGLNHFADMTNEEFRAKYL 57
LG+N FAD+TNEEFRA +L
Sbjct: 99 LGMNRFADLTNEEFRATFL 117
>sp|P54639|CYSP4_DICDI Cysteine proteinase 4 precursor
Length = 442
Score = 34.3 bits (77), Expect = 0.090
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 1 LGLNHFADMTNEEFRAKYLSVP 66
LGLN FAD+TN+E+R YL P
Sbjct: 72 LGLNVFADITNQEYRTTYLGTP 93
>sp|Q9LT77|CPR1_ARATH Putative cysteine proteinase At3g19400 precursor
Length = 362
Score = 34.3 bits (77), Expect = 0.090
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = +1
Query: 1 LGLNHFADMTNEEFRAKYLSVPPSRKKIS 87
+GL FAD+TNEEFRA YL R K S
Sbjct: 88 VGLTRFADLTNEEFRAIYLRKKMERTKDS 116
>sp|P04989|CYSP2_DICDI Cysteine proteinase 2 precursor (Prestalk cathepsin)
Length = 376
Score = 33.9 bits (76), Expect = 0.12
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +1
Query: 1 LGLNHFADMTNEEFRAKYL 57
LGLN+FAD+TNEE+R YL
Sbjct: 79 LGLNNFADITNEEYRKTYL 97
>sp|O65493|XCP1_ARATH Xylem cysteine proteinase 1 precursor (AtXCP1)
Length = 355
Score = 33.9 bits (76), Expect = 0.12
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +1
Query: 1 LGLNHFADMTNEEFRAKYLSV 63
LGLN FAD+T+EEF+ +YL +
Sbjct: 94 LGLNEFADLTHEEFKGRYLGL 114
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,178,048
Number of Sequences: 369166
Number of extensions: 86117
Number of successful extensions: 337
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 337
length of database: 68,354,980
effective HSP length: 9
effective length of database: 66,692,365
effective search space used: 1667309125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)