Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_006_J17
(900 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q7ZVI7|ACTB1_BRARE Actin, cytoplasmic 1 (Beta-actin-1) 594 e-169
sp|P92182|ACT1_LUMTE Actin-1 593 e-169
sp|O42161|ACTB_SALSA Actin, cytoplasmic 1 (Beta-actin) 593 e-169
sp|P68143|ACTB_OREMO Actin, cytoplasmic 1 (Beta-actin) >gi|... 593 e-169
sp|P83750|ACTB_CYPCA Actin, cytoplasmic 1 (Beta-actin) >gi|... 593 e-169
sp|P53485|ACT2_FUGRU Actin, cytoplasmic 2 (Beta-actin-2) 593 e-169
sp|P63260|ACTG_MOUSE Actin, cytoplasmic 2 (Gamma-actin) >gi... 592 e-169
sp|P53471|ACT2_SCHMA Actin-2 592 e-169
sp|P53505|ACT5_XENLA Actin, cytoplasmic type 5 591 e-169
sp|P53478|ACT5_CHICK Actin, cytoplasmic type 5 591 e-168
>sp|Q7ZVI7|ACTB1_BRARE Actin, cytoplasmic 1 (Beta-actin-1)
Length = 375
Score = 594 bits (1531), Expect = e-169
Identities = 291/297 (97%), Positives = 296/297 (99%)
Frame = +1
Query: 10 EEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 189
+EE++ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 190 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 369
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 370 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 549
IMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLA
Sbjct: 122 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Query: 550 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYE 729
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYE
Sbjct: 182 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYE 241
Query: 730 LPDGQVITIGNERFRCPESLFQPSFLGMESAGIHETTFNSIMKCDVDIRKDLYANTV 900
LPDGQVITIGNERFRCPE+LFQPSFLGMES GIHETTFNSIMKCDVDIRKDLYANTV
Sbjct: 242 LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTV 298
>sp|P92182|ACT1_LUMTE Actin-1
Length = 376
Score = 593 bits (1529), Expect = e-169
Identities = 291/297 (97%), Positives = 297/297 (100%)
Frame = +1
Query: 10 EEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 189
+EEV+ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DEEVTALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 190 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 369
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 370 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 549
IMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 182
Query: 550 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYE 729
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF+QEMGTAASSSSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFDQEMGTAASSSSLEKSYE 242
Query: 730 LPDGQVITIGNERFRCPESLFQPSFLGMESAGIHETTFNSIMKCDVDIRKDLYANTV 900
LPDGQVITIGNERFRCPES+FQP+FLGMESAGIHETTFNSIMKCDVDIRKDLYANTV
Sbjct: 243 LPDGQVITIGNERFRCPESMFQPAFLGMESAGIHETTFNSIMKCDVDIRKDLYANTV 299
>sp|O42161|ACTB_SALSA Actin, cytoplasmic 1 (Beta-actin)
Length = 375
Score = 593 bits (1528), Expect = e-169
Identities = 290/297 (97%), Positives = 296/297 (99%)
Frame = +1
Query: 10 EEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 189
E+E++ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 190 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 369
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 370 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 549
IMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLA
Sbjct: 122 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Query: 550 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYE 729
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYE
Sbjct: 182 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYE 241
Query: 730 LPDGQVITIGNERFRCPESLFQPSFLGMESAGIHETTFNSIMKCDVDIRKDLYANTV 900
LPDGQVITIGNERFRCPE+LFQPSFLGMES GIHETT+NSIMKCDVDIRKDLYANTV
Sbjct: 242 LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRKDLYANTV 298
>sp|P68143|ACTB_OREMO Actin, cytoplasmic 1 (Beta-actin)
sp|P68142|ACT1_FUGRU Actin, cytoplasmic 1 (Beta-actin-1)
Length = 375
Score = 593 bits (1528), Expect = e-169
Identities = 290/297 (97%), Positives = 296/297 (99%)
Frame = +1
Query: 10 EEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 189
E+E++ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 190 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 369
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 370 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 549
IMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLA
Sbjct: 122 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Query: 550 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYE 729
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYE
Sbjct: 182 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYE 241
Query: 730 LPDGQVITIGNERFRCPESLFQPSFLGMESAGIHETTFNSIMKCDVDIRKDLYANTV 900
LPDGQVITIGNERFRCPE+LFQPSFLGMES GIHETT+NSIMKCDVDIRKDLYANTV
Sbjct: 242 LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRKDLYANTV 298
>sp|P83750|ACTB_CYPCA Actin, cytoplasmic 1 (Beta-actin)
sp|P83751|ACTB_CTEID Actin, cytoplasmic 1 (Beta-actin)
Length = 375
Score = 593 bits (1528), Expect = e-169
Identities = 290/297 (97%), Positives = 296/297 (99%)
Frame = +1
Query: 10 EEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 189
++E++ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 190 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 369
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 370 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 549
IMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLA
Sbjct: 122 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Query: 550 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYE 729
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYE
Sbjct: 182 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYE 241
Query: 730 LPDGQVITIGNERFRCPESLFQPSFLGMESAGIHETTFNSIMKCDVDIRKDLYANTV 900
LPDGQVITIGNERFRCPE+LFQPSFLGMES GIHETTFNSIMKCDVDIRKDLYANTV
Sbjct: 242 LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTV 298
>sp|P53485|ACT2_FUGRU Actin, cytoplasmic 2 (Beta-actin-2)
Length = 375
Score = 593 bits (1528), Expect = e-169
Identities = 290/297 (97%), Positives = 296/297 (99%)
Frame = +1
Query: 10 EEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 189
++E++ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 190 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 369
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 370 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 549
IMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLA
Sbjct: 122 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Query: 550 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYE 729
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYE
Sbjct: 182 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYE 241
Query: 730 LPDGQVITIGNERFRCPESLFQPSFLGMESAGIHETTFNSIMKCDVDIRKDLYANTV 900
LPDGQVITIGNERFRCPE+LFQPSFLGMES GIHETTFNSIMKCDVDIRKDLYANTV
Sbjct: 242 LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTV 298
>sp|P63260|ACTG_MOUSE Actin, cytoplasmic 2 (Gamma-actin)
sp|P63259|ACTG_RAT Actin, cytoplasmic 2 (Gamma-actin)
sp|P63257|ACTG_TRIVU Actin, cytoplasmic 2 (Gamma-actin)
sp|P63261|ACTG_HUMAN Actin, cytoplasmic 2 (Gamma-actin)
sp|P63258|ACTG_BOVIN Actin, cytoplasmic 2 (Gamma-actin)
Length = 375
Score = 592 bits (1527), Expect = e-169
Identities = 290/297 (97%), Positives = 295/297 (99%)
Frame = +1
Query: 10 EEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 189
EEE++ALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 190 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 369
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 370 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 549
IMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLA
Sbjct: 122 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Query: 550 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYE 729
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYE
Sbjct: 182 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 241
Query: 730 LPDGQVITIGNERFRCPESLFQPSFLGMESAGIHETTFNSIMKCDVDIRKDLYANTV 900
LPDGQVITIGNERFRCPE+LFQPSFLGMES GIHETTFNSIMKCDVDIRKDLYANTV
Sbjct: 242 LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTV 298
>sp|P53471|ACT2_SCHMA Actin-2
Length = 376
Score = 592 bits (1526), Expect = e-169
Identities = 291/297 (97%), Positives = 294/297 (98%)
Frame = +1
Query: 10 EEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 189
+EEV ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DEEVQALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 190 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 369
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 370 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 549
IMFETFNTPAMYV IQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNTPAMYVGIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 182
Query: 550 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYE 729
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 242
Query: 730 LPDGQVITIGNERFRCPESLFQPSFLGMESAGIHETTFNSIMKCDVDIRKDLYANTV 900
LPDGQVITIGNERFRCPE+LFQPSFLGMESAG+HETTFNSIMKCDVDIRKDLYANTV
Sbjct: 243 LPDGQVITIGNERFRCPEALFQPSFLGMESAGVHETTFNSIMKCDVDIRKDLYANTV 299
>sp|P53505|ACT5_XENLA Actin, cytoplasmic type 5
Length = 376
Score = 591 bits (1524), Expect = e-169
Identities = 289/297 (97%), Positives = 295/297 (99%)
Frame = +1
Query: 10 EEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 189
+EE++ALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 190 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 369
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 370 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 549
IMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 182
Query: 550 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYE 729
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 242
Query: 730 LPDGQVITIGNERFRCPESLFQPSFLGMESAGIHETTFNSIMKCDVDIRKDLYANTV 900
LPDGQVITIGNERFRCPE+LFQPSFLGMES GIHETTFNSIMKCDVDIRKDLYANTV
Sbjct: 243 LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTV 299
>sp|P53478|ACT5_CHICK Actin, cytoplasmic type 5
Length = 376
Score = 591 bits (1523), Expect = e-168
Identities = 289/297 (97%), Positives = 295/297 (99%)
Frame = +1
Query: 10 EEEVSALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 189
+EE++ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 190 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 369
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 370 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 549
IMFETFNTPAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 182
Query: 550 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYE 729
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 242
Query: 730 LPDGQVITIGNERFRCPESLFQPSFLGMESAGIHETTFNSIMKCDVDIRKDLYANTV 900
LPDGQVITIGNERFRCPE++FQPSFLGMES GIHETTFNSIMKCDVDIRKDLYANTV
Sbjct: 243 LPDGQVITIGNERFRCPEAIFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTV 299
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,020,377
Number of Sequences: 369166
Number of extensions: 2138856
Number of successful extensions: 6457
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6272
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9078450570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)