Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_006_J08
(882 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P58021|TM9S2_MOUSE Transmembrane 9 superfamily protein m... 431 e-120
sp|Q66HG5|TM9S2_RAT Transmembrane 9 superfamily protein mem... 430 e-120
sp|Q99805|TM9S2_HUMAN Transmembrane 9 superfamily protein m... 430 e-120
sp|Q5R8Y6|TM9S2_PONPY Transmembrane 9 superfamily protein m... 430 e-120
sp|Q92544|TM9S4_HUMAN Transmembrane 9 superfamily protein m... 328 1e-89
sp|P32802|EMP70_YEAST Endosomal P24A protein precursor (70 ... 251 2e-66
sp|Q9DBU0|TM9S1_MOUSE Transmembrane 9 superfamily protein m... 201 2e-51
sp|O15321|TM9S1_HUMAN Transmembrane 9 superfamily protein m... 200 4e-51
sp|Q5R8F1|TM9S1_PONPY Transmembrane 9 superfamily protein m... 200 4e-51
sp|Q9ET30|TM9S3_MOUSE Transmembrane 9 superfamily protein m... 189 9e-48
>sp|P58021|TM9S2_MOUSE Transmembrane 9 superfamily protein member 2 precursor
Length = 662
Score = 431 bits (1107), Expect = e-120
Identities = 197/294 (67%), Positives = 234/294 (79%), Gaps = 1/294 (0%)
Frame = +2
Query: 2 KTLHRDIDRYNKLD-TEEAQEEFGWKLVHGDVFRPPRMGMTLCVFVGSGVQLILMTIVTL 178
+TLH+DI RYN++D TE+AQEEFGWKLVHGD+FRPPR GM L VF+GSG Q+++MT VTL
Sbjct: 323 RTLHKDIARYNQMDSTEDAQEEFGWKLVHGDIFRPPRKGMLLSVFLGSGTQILIMTFVTL 382
Query: 179 FISCFGFLSPANRGAFATCGIVFYVLFGAFAGFYSARLYKMMSGEKWKSNVLLTAFLCPG 358
F +C GFLSPANRGA TC +V +VL G AG+ +AR YK GEKWK+NVLLT+FLCPG
Sbjct: 383 FFACLGFLSPANRGALMTCAVVLWVLLGTPAGYVAARFYKSFGGEKWKTNVLLTSFLCPG 442
Query: 359 SVFGIFFVLNIVLWASGSSAAVPFTTILGLLAMWFLISVPLCFVGAYFGFKKQPISQPVR 538
VF FF++N++LW GSSAA+PF T++ +LA+WF ISVPL F+GAYFGFKK I PVR
Sbjct: 443 IVFADFFIMNLILWGEGSSAAIPFGTLVAILALWFCISVPLTFIGAYFGFKKNAIEHPVR 502
Query: 539 TNQIPRQIPYQYLYTRSIPSILMGGVLPFGCIFIQLFFILNSIWSTYVYYMFGXXXXXXX 718
TNQIPRQIP Q YT+ +P I+MGG+LPFGCIFIQLFFILNSIWS +YYMFG
Sbjct: 503 TNQIPRQIPEQSFYTKPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFI 562
Query: 719 XXXXTCSETTILLCYFHLCAEDYRWWWRSFLTSGCTALYLFIYSIYFFHAKLDI 880
TCSE TILLCYFHLCAEDY W WRSFLTSG TA+Y IY+I++F +KL I
Sbjct: 563 ILVITCSEATILLCYFHLCAEDYHWQWRSFLTSGFTAVYFLIYAIHYFFSKLQI 616
>sp|Q66HG5|TM9S2_RAT Transmembrane 9 superfamily protein member 2 precursor
Length = 663
Score = 430 bits (1106), Expect = e-120
Identities = 196/294 (66%), Positives = 234/294 (79%), Gaps = 1/294 (0%)
Frame = +2
Query: 2 KTLHRDIDRYNKLD-TEEAQEEFGWKLVHGDVFRPPRMGMTLCVFVGSGVQLILMTIVTL 178
+TLH+DI RYN++D TE+AQEEFGWKLVHGD+FRPPR GM L VF+GSG Q+++MT VTL
Sbjct: 324 RTLHKDIARYNQMDSTEDAQEEFGWKLVHGDIFRPPRKGMLLSVFLGSGTQILIMTFVTL 383
Query: 179 FISCFGFLSPANRGAFATCGIVFYVLFGAFAGFYSARLYKMMSGEKWKSNVLLTAFLCPG 358
F +C GFLSPANRGA TC +V +VL G AG+ +AR YK GEKWK+NVLLT+FLCPG
Sbjct: 384 FFACLGFLSPANRGALMTCAVVLWVLLGTPAGYVAARFYKSFGGEKWKTNVLLTSFLCPG 443
Query: 359 SVFGIFFVLNIVLWASGSSAAVPFTTILGLLAMWFLISVPLCFVGAYFGFKKQPISQPVR 538
VF FF++N++LW GSSAA+PF T++ +LA+WF ISVPL F+GAYFGFKK I PVR
Sbjct: 444 IVFADFFIMNLILWGEGSSAAIPFGTLVAILALWFCISVPLTFIGAYFGFKKNAIEHPVR 503
Query: 539 TNQIPRQIPYQYLYTRSIPSILMGGVLPFGCIFIQLFFILNSIWSTYVYYMFGXXXXXXX 718
TNQIPRQIP Q YT+ +P I+MGG+LPFGCIFIQLFFILNSIWS +YYMFG
Sbjct: 504 TNQIPRQIPEQSFYTKPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFI 563
Query: 719 XXXXTCSETTILLCYFHLCAEDYRWWWRSFLTSGCTALYLFIYSIYFFHAKLDI 880
TCSE TILLCYFHLCAEDY W WRSFLTSG TA+Y +Y+I++F +KL I
Sbjct: 564 ILVITCSEATILLCYFHLCAEDYHWQWRSFLTSGFTAVYFLVYAIHYFFSKLQI 617
>sp|Q99805|TM9S2_HUMAN Transmembrane 9 superfamily protein member 2 precursor (p76)
Length = 663
Score = 430 bits (1106), Expect = e-120
Identities = 196/294 (66%), Positives = 234/294 (79%), Gaps = 1/294 (0%)
Frame = +2
Query: 2 KTLHRDIDRYNKLD-TEEAQEEFGWKLVHGDVFRPPRMGMTLCVFVGSGVQLILMTIVTL 178
+TLH+DI RYN++D TE+AQEEFGWKLVHGD+FRPPR GM L VF+GSG Q+++MT VTL
Sbjct: 324 RTLHKDIARYNQMDSTEDAQEEFGWKLVHGDIFRPPRKGMLLSVFLGSGTQILIMTFVTL 383
Query: 179 FISCFGFLSPANRGAFATCGIVFYVLFGAFAGFYSARLYKMMSGEKWKSNVLLTAFLCPG 358
F +C GFLSPANRGA TC +V +VL G AG+ +AR YK GEKWK+NVLLT+FLCPG
Sbjct: 384 FFACLGFLSPANRGALMTCAVVLWVLLGTPAGYVAARFYKSFGGEKWKTNVLLTSFLCPG 443
Query: 359 SVFGIFFVLNIVLWASGSSAAVPFTTILGLLAMWFLISVPLCFVGAYFGFKKQPISQPVR 538
VF FF++N++LW GSSAA+PF T++ +LA+WF ISVPL F+GAYFGFKK I PVR
Sbjct: 444 IVFADFFIMNLILWGEGSSAAIPFGTLVAILALWFCISVPLTFIGAYFGFKKNAIEHPVR 503
Query: 539 TNQIPRQIPYQYLYTRSIPSILMGGVLPFGCIFIQLFFILNSIWSTYVYYMFGXXXXXXX 718
TNQIPRQIP Q YT+ +P I+MGG+LPFGCIFIQLFFILNSIWS +YYMFG
Sbjct: 504 TNQIPRQIPEQSFYTKPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFI 563
Query: 719 XXXXTCSETTILLCYFHLCAEDYRWWWRSFLTSGCTALYLFIYSIYFFHAKLDI 880
TCSE TILLCYFHLCAEDY W WRSFLTSG TA+Y IY++++F +KL I
Sbjct: 564 ILVITCSEATILLCYFHLCAEDYHWQWRSFLTSGFTAVYFLIYAVHYFFSKLQI 617
>sp|Q5R8Y6|TM9S2_PONPY Transmembrane 9 superfamily protein member 2 precursor
Length = 663
Score = 430 bits (1106), Expect = e-120
Identities = 196/294 (66%), Positives = 234/294 (79%), Gaps = 1/294 (0%)
Frame = +2
Query: 2 KTLHRDIDRYNKLD-TEEAQEEFGWKLVHGDVFRPPRMGMTLCVFVGSGVQLILMTIVTL 178
+TLH+DI RYN++D TE+AQEEFGWKLVHGD+FRPPR GM L VF+GSG Q+++MT VTL
Sbjct: 324 RTLHKDIARYNQMDSTEDAQEEFGWKLVHGDIFRPPRKGMLLSVFLGSGTQILIMTFVTL 383
Query: 179 FISCFGFLSPANRGAFATCGIVFYVLFGAFAGFYSARLYKMMSGEKWKSNVLLTAFLCPG 358
F +C GFLSPANRGA TC +V +VL G AG+ +AR YK GEKWK+NVLLT+FLCPG
Sbjct: 384 FFACLGFLSPANRGALMTCAVVLWVLLGTPAGYVAARFYKSFGGEKWKTNVLLTSFLCPG 443
Query: 359 SVFGIFFVLNIVLWASGSSAAVPFTTILGLLAMWFLISVPLCFVGAYFGFKKQPISQPVR 538
VF FF++N++LW GSSAA+PF T++ +LA+WF ISVPL F+GAYFGFKK I PVR
Sbjct: 444 IVFADFFIMNLILWGEGSSAAIPFGTLVAILALWFCISVPLTFIGAYFGFKKNAIEHPVR 503
Query: 539 TNQIPRQIPYQYLYTRSIPSILMGGVLPFGCIFIQLFFILNSIWSTYVYYMFGXXXXXXX 718
TNQIPRQIP Q YT+ +P I+MGG+LPFGCIFIQLFFILNSIWS +YYMFG
Sbjct: 504 TNQIPRQIPEQSFYTKPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFI 563
Query: 719 XXXXTCSETTILLCYFHLCAEDYRWWWRSFLTSGCTALYLFIYSIYFFHAKLDI 880
TCSE TILLCYFHLCAEDY W WRSFLTSG TA+Y IY++++F +KL I
Sbjct: 564 ILVITCSEATILLCYFHLCAEDYHWQWRSFLTSGFTAVYFLIYAVHYFFSKLQI 617
>sp|Q92544|TM9S4_HUMAN Transmembrane 9 superfamily protein member 4
Length = 625
Score = 328 bits (841), Expect = 1e-89
Identities = 152/294 (51%), Positives = 196/294 (66%), Gaps = 1/294 (0%)
Frame = +2
Query: 2 KTLHRDIDRYNKLDT-EEAQEEFGWKLVHGDVFRPPRMGMTLCVFVGSGVQLILMTIVTL 178
+TL +DI YNK D E+ EE GWKLVHGDVFRPP+ M L +GSG+QL M ++ +
Sbjct: 286 RTLRKDIANYNKEDDIEDTMEESGWKLVHGDVFRPPQYPMILSSLLGSGIQLFCMILIVI 345
Query: 179 FISCFGFLSPANRGAFATCGIVFYVLFGAFAGFYSARLYKMMSGEKWKSNVLLTAFLCPG 358
F++ G LSP++RGA T ++ G F GF + RLY+ + G +WK TA L PG
Sbjct: 346 FVAMLGMLSPSSRGALMTTACFLFMFMGVFGGFSAGRLYRTLKGHRWKKGAFCTATLYPG 405
Query: 359 SVFGIFFVLNIVLWASGSSAAVPFTTILGLLAMWFLISVPLCFVGAYFGFKKQPISQPVR 538
VFGI FVLN +W SS AVPF T++ LL MWF IS+PL ++G YFGF+KQP PVR
Sbjct: 406 VVFGICFVLNCFIWGKHSSGAVPFPTMVALLCMWFGISLPLVYLGYYFGFRKQPYDNPVR 465
Query: 539 TNQIPRQIPYQYLYTRSIPSILMGGVLPFGCIFIQLFFILNSIWSTYVYYMFGXXXXXXX 718
TNQIPRQIP Q Y ILM G+LPFG +FI+LFFI ++IW YY+FG
Sbjct: 466 TNQIPRQIPEQRWYMNRFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFGFLFLVFI 525
Query: 719 XXXXTCSETTILLCYFHLCAEDYRWWWRSFLTSGCTALYLFIYSIYFFHAKLDI 880
+CS+ +I++ YF LCAEDYRWWWR+FL SG +A Y+ +Y+I++F KLDI
Sbjct: 526 ILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLVYAIFYFVNKLDI 579
>sp|P32802|EMP70_YEAST Endosomal P24A protein precursor (70 kDa endomembrane protein)
(Pheromone alpha-factor transporter) (Acidic 24 kDa late
endocytic intermediate component)
Length = 667
Score = 251 bits (641), Expect = 2e-66
Identities = 125/294 (42%), Positives = 178/294 (60%), Gaps = 3/294 (1%)
Frame = +2
Query: 2 KTLHRDIDRYNKLDTEEA-QEEFGWKLVHGDVFRPPRMGMTLCVFVGSGVQLILMTIVTL 178
+ L D RYN+L+ ++ QE+ GWKL HGDVFR P +TL + VGSGVQL LM ++
Sbjct: 328 RALKSDFARYNELNLDDDFQEDSGWKLNHGDVFRSPSQSLTLSILVGSGVQLFLMVTCSI 387
Query: 179 FISCFGFLSPANRGAFATCGIVFYVLFGAFAGFYSARLYKMMSGEKWKSNVLLTAFLCPG 358
F + GFLSP++RG+ AT + Y LFG + S +YK +G WK+N++LT L PG
Sbjct: 388 FFAALGFLSPSSRGSLATVMFILYALFGFVGSYTSMGIYKFFNGPYWKANLILTPLLVPG 447
Query: 359 SVFGIFFVLNIVLWASGSSAAVPFTTILGLLAMWFLISVPLCFVGAYFGFKKQPISQ-PV 535
++ I LN L SS +P +T+ ++ +WFL S+PL F G+ K+ + P
Sbjct: 448 AILLIIIALNFFLMFVHSSGVIPASTLFFMVFLWFLFSIPLSFAGSLIARKRCHWDEHPT 507
Query: 536 RTNQIPRQIPYQYLYTRSIPSILMGGVLPFGCIFIQLFFILNSIWSTYVYYMFGXXXXXX 715
+TNQI RQIP+Q Y ++IP+ L+ G+ PFG I ++L+FI S+W ++YMFG
Sbjct: 508 KTNQIARQIPFQPWYLKTIPATLIAGIFPFGSIAVELYFIYTSLWFNKIFYMFGFLFFSF 567
Query: 716 XXXXXTCSETTILLCYFHLCAEDYRWWWRSFLTSGC-TALYLFIYSIYFFHAKL 874
T S TIL+ Y LC E+++W WR F+ G ALY+FI+SI F KL
Sbjct: 568 LLLTLTSSLVTILITYHSLCLENWKWQWRGFIIGGAGCALYVFIHSILFTKFKL 621
>sp|Q9DBU0|TM9S1_MOUSE Transmembrane 9 superfamily protein member 1 precursor
Length = 606
Score = 201 bits (511), Expect = 2e-51
Identities = 106/298 (35%), Positives = 162/298 (54%), Gaps = 11/298 (3%)
Frame = +2
Query: 2 KTLHRDIDRYNKLDTEEA---------QEEFGWKLVHGDVFR-PPRMGMTLCVFVGSGVQ 151
+ L D+ RYN LD E + Q + GWK++H DVFR PP G+ LC +G G Q
Sbjct: 259 RVLRNDLARYN-LDEETSSGGSSDDFDQGDNGWKIIHTDVFRFPPYRGL-LCAVLGVGAQ 316
Query: 152 LILMTIVTLFISCFGFLSPANRGAFATCGIVFYVLFGAFAGFYSARLYKMMSGEKWKSNV 331
+ + + ++ G + GA + I+ Y L +G+ S+ Y+ + GE+W N+
Sbjct: 317 FLALGTGIIVMALLGMFNVHRHGAINSAAILLYALTCCISGYVSSHFYRQIGGERWVWNI 376
Query: 332 LLTAFLCPGSVFGIFFVLNIVLWASGSSAAVPFTTILGLLAMWFLISVPLCFVGAYFGFK 511
+LT+ L F + V+N V WA+GS+ A+P TTIL LL +W L+ PL +G FG
Sbjct: 377 ILTSSLFSVPFFLTWSVVNSVHWANGSTQALPATTILLLLTVWLLVGFPLTVIGGIFGKN 436
Query: 512 K-QPISQPVRTNQIPRQIPYQYLYTRSIPSILMGGVLPFGCIFIQLFFILNSIWSTYVYY 688
P P RT I R+IP Q Y ++ + +GG LPF I ++L++I ++W Y
Sbjct: 437 NASPFDAPCRTKNIAREIPPQPWYKSTVIHMTVGGFLPFSAISVELYYIFATVWGREQYT 496
Query: 689 MFGXXXXXXXXXXXTCSETTILLCYFHLCAEDYRWWWRSFLTSGCTALYLFIYSIYFF 862
++G + +I L YF L EDYRWWWRS L+ G T L++F+YS++++
Sbjct: 497 LYGILFFVFAILLSVGACISIALTYFQLSGEDYRWWWRSVLSVGSTGLFIFLYSVFYY 554
>sp|O15321|TM9S1_HUMAN Transmembrane 9 superfamily protein member 1 precursor (hMP70)
Length = 606
Score = 200 bits (509), Expect = 4e-51
Identities = 106/298 (35%), Positives = 160/298 (53%), Gaps = 11/298 (3%)
Frame = +2
Query: 2 KTLHRDIDRYNKLDTEEA---------QEEFGWKLVHGDVFR-PPRMGMTLCVFVGSGVQ 151
+ L D+ RYN LD E Q + GWK++H DVFR PP G+ LC +G G Q
Sbjct: 259 RVLRNDLARYN-LDEETTSAGSGDDFDQGDNGWKIIHTDVFRFPPYRGL-LCAVLGVGAQ 316
Query: 152 LILMTIVTLFISCFGFLSPANRGAFATCGIVFYVLFGAFAGFYSARLYKMMSGEKWKSNV 331
+ + + ++ G + GA + I+ Y L +G+ S+ Y+ + GE+W N+
Sbjct: 317 FLALGTGIIVMALLGMFNVHRHGAINSAAILLYALTCCISGYVSSHFYRQIGGERWVWNI 376
Query: 332 LLTAFLCPGSVFGIFFVLNIVLWASGSSAAVPFTTILGLLAMWFLISVPLCFVGAYFGFK 511
+LT L F + V+N V WA+GS+ A+P TTIL LL +W L+ PL +G FG
Sbjct: 377 ILTTSLFSVPFFLTWSVVNSVHWANGSTQALPATTILLLLTVWLLVGFPLTVIGGIFGKN 436
Query: 512 K-QPISQPVRTNQIPRQIPYQYLYTRSIPSILMGGVLPFGCIFIQLFFILNSIWSTYVYY 688
P P RT I R+IP Q Y ++ + +GG LPF I ++L++I ++W Y
Sbjct: 437 NASPFDAPCRTKNIAREIPPQPWYKSTVIHMTVGGFLPFSAISVELYYIFATVWGREQYT 496
Query: 689 MFGXXXXXXXXXXXTCSETTILLCYFHLCAEDYRWWWRSFLTSGCTALYLFIYSIYFF 862
++G + +I L YF L EDYRWWWRS L+ G T L++F+YS++++
Sbjct: 497 LYGILFFVFAILLSVGACISIALTYFQLSGEDYRWWWRSVLSVGSTGLFIFLYSVFYY 554
>sp|Q5R8F1|TM9S1_PONPY Transmembrane 9 superfamily protein member 1 precursor
Length = 606
Score = 200 bits (509), Expect = 4e-51
Identities = 106/298 (35%), Positives = 160/298 (53%), Gaps = 11/298 (3%)
Frame = +2
Query: 2 KTLHRDIDRYNKLDTEEA---------QEEFGWKLVHGDVFR-PPRMGMTLCVFVGSGVQ 151
+ L D+ RYN LD E Q + GWK++H DVFR PP G+ LC +G G Q
Sbjct: 259 RVLRNDLARYN-LDEETTSAGSGDDFDQGDNGWKIIHTDVFRFPPYRGL-LCAVLGVGAQ 316
Query: 152 LILMTIVTLFISCFGFLSPANRGAFATCGIVFYVLFGAFAGFYSARLYKMMSGEKWKSNV 331
+ + + ++ G + GA + I+ Y L +G+ S+ Y+ + GE+W N+
Sbjct: 317 FLALGTGIIVMALLGMFNVHRHGAINSAAILLYALTCCISGYVSSHFYRQIGGERWVWNI 376
Query: 332 LLTAFLCPGSVFGIFFVLNIVLWASGSSAAVPFTTILGLLAMWFLISVPLCFVGAYFGFK 511
+LT L F + V+N V WA+GS+ A+P TTIL LL +W L+ PL +G FG
Sbjct: 377 ILTTSLFSVPFFLTWSVVNSVHWANGSTQALPATTILLLLTVWLLVGFPLTVIGGIFGKN 436
Query: 512 K-QPISQPVRTNQIPRQIPYQYLYTRSIPSILMGGVLPFGCIFIQLFFILNSIWSTYVYY 688
P P RT I R+IP Q Y ++ + +GG LPF I ++L++I ++W Y
Sbjct: 437 NASPFDAPCRTKNIAREIPPQPWYKSTVIHMTVGGFLPFSAISVELYYIFATVWGREQYT 496
Query: 689 MFGXXXXXXXXXXXTCSETTILLCYFHLCAEDYRWWWRSFLTSGCTALYLFIYSIYFF 862
++G + +I L YF L EDYRWWWRS L+ G T L++F+YS++++
Sbjct: 497 LYGILFFVFAILLSVGACISIALTYFQLSGEDYRWWWRSVLSVGSTGLFIFLYSVFYY 554
>sp|Q9ET30|TM9S3_MOUSE Transmembrane 9 superfamily protein member 3 precursor
Length = 587
Score = 189 bits (480), Expect = 9e-48
Identities = 98/297 (32%), Positives = 155/297 (52%), Gaps = 7/297 (2%)
Frame = +2
Query: 2 KTLHRDIDRYNKLDT-----EEAQEEFGWKLVHGDVFRPPRMGMTLCVFVGSGVQLILMT 166
+TL +D RY+K + + +E+GWK VHGDVFRP + +GSG Q+ ++
Sbjct: 244 RTLRKDYARYSKEEEMDDMDRDLGDEYGWKQVHGDVFRPSSHPLIFSSLIGSGCQIFAVS 303
Query: 167 IVTLFISCFGFLSPANRGAFATCGIVFYVLFGAFAGFYSARLYKMMSGEKWKSNVLLTAF 346
++ + ++ L RG+ + I Y G++ LY G +W + + AF
Sbjct: 304 LIVIIVAMIEDLY-TERGSMLSTAIFVYAATSPVNGYFGGSLYARQGGRRWIKQMFIGAF 362
Query: 347 LCPGSVFGIFFVLNIVLWASGSSAAVPFTTILGLLAMWFLISVPLCFVGAYFG--FKKQP 520
L P V G F +N + +S A+PF T++ + + F + +PL VG G QP
Sbjct: 363 LIPAMVCGTAFFINFIAIYYHASRAIPFGTMVAVCCICFFVILPLNLVGTILGRNLSGQP 422
Query: 521 ISQPVRTNQIPRQIPYQYLYTRSIPSILMGGVLPFGCIFIQLFFILNSIWSTYVYYMFGX 700
+ P R N +PR IP + + + +GG+LPFG IFI+++FI S W+ +YY++G
Sbjct: 423 -NFPCRVNAVPRPIPEKKWFMEPAVIVCLGGILPFGSIFIEMYFIFTSFWAYKIYYVYGF 481
Query: 701 XXXXXXXXXXTCSETTILLCYFHLCAEDYRWWWRSFLTSGCTALYLFIYSIYFFHAK 871
TI+ YF L AEDYRW W SFL++ TA+Y+++YS Y++ K
Sbjct: 482 MMLVLVILCIVTVCVTIVCTYFLLNAEDYRWQWTSFLSAASTAIYVYMYSFYYYFFK 538
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,382,247
Number of Sequences: 369166
Number of extensions: 2314552
Number of successful extensions: 6519
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6488
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8790245790
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)