Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_006_I14
(669 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q24439|ATPO_DROME ATP synthase O subunit, mitochondrial ... 167 2e-41
sp|P13621|ATPO_BOVIN ATP synthase O subunit, mitochondrial ... 140 3e-33
sp|Q5RD23|ATPO_PONPY ATP synthase O subunit, mitochondrial ... 139 7e-33
sp|P48047|ATPO_HUMAN ATP synthase O subunit, mitochondrial ... 138 1e-32
sp|Q06647|ATPO_RAT ATP synthase O subunit, mitochondrial pr... 137 3e-32
sp|Q9DB20|ATPO_MOUSE ATP synthase O subunit, mitochondrial ... 134 2e-31
sp|Q96251|ATPO_ARATH ATP synthase delta chain, mitochondria... 125 8e-29
sp|P22778|ATPO_IPOBA ATP synthase delta chain, mitochondria... 119 5e-27
sp|Q9P602|ATPO_NEUCR ATP synthase subunit 5, mitochondrial ... 113 4e-25
sp|O74190|ATPO_KLULA ATP synthase subunit 5, mitochondrial ... 105 1e-22
>sp|Q24439|ATPO_DROME ATP synthase O subunit, mitochondrial precursor (Oligomycin
sensitivity conferral protein) (OSCP)
Length = 209
Score = 167 bits (424), Expect = 2e-41
Identities = 78/199 (39%), Positives = 134/199 (67%)
Frame = +2
Query: 29 LARKFSTSVIHHTVQVPIQLFGIEGRYATALYSAAVKLNQLEVVEGDVNKLKNVLKTDKK 208
L+R S++ TV+ P+Q+FG+EGRYATALYSAA KL+QL+ VE D+ L+ +++DKK
Sbjct: 10 LSRTLSSAAAQATVKPPVQVFGLEGRYATALYSAASKLSQLDQVEKDLTALQATIRSDKK 69
Query: 209 FLEFLNDPVLNRSLKSSAVQKALLKLNFSDPMKRFFDIMGKNGQLHRTVSILSSMDSIFE 388
E++ P++N+ + ++A+++A KL F+ ++ NG+L + +++++ +I
Sbjct: 70 LREYVTSPIINKKVMATALKEASEKLRFAPATVNLLGLLADNGRLKKLDTVINAYKTIMA 129
Query: 389 ASKGNVRCIITTAKPIDEATEKEFIAALQLFVSKNQKIIVEKKIDKELIGGATVSIGDKF 568
A +G V C + TAKP+D + K+ AL+ F+ N+ + + ++D +IGG VSIGDK+
Sbjct: 130 AHRGEVVCEVVTAKPLDASQSKQLEGALKSFLKGNESLKITSRVDPSIIGGLIVSIGDKY 189
Query: 569 VDMSVAKKVRMFQDVLERA 625
VDMS+A KV+++ DV++ A
Sbjct: 190 VDMSIATKVKLYTDVIQTA 208
>sp|P13621|ATPO_BOVIN ATP synthase O subunit, mitochondrial precursor (Oligomycin
sensitivity conferral protein) (OSCP)
Length = 213
Score = 140 bits (353), Expect = 3e-33
Identities = 78/204 (38%), Positives = 118/204 (57%), Gaps = 3/204 (1%)
Frame = +2
Query: 26 QLARKFSTSVIH---HTVQVPIQLFGIEGRYATALYSAAVKLNQLEVVEGDVNKLKNVLK 196
Q R FSTSV+ V+ P+Q++GIEGRYATALYSAA K N+LE VE ++ ++ +LK
Sbjct: 11 QQVRCFSTSVVRPFAKLVRPPVQIYGIEGRYATALYSAASKQNKLEQVEKELLRVGQILK 70
Query: 197 TDKKFLEFLNDPVLNRSLKSSAVQKALLKLNFSDPMKRFFDIMGKNGQLHRTVSILSSMD 376
K LN P + RS+K ++ K FS +++ +NG+L T +++S+
Sbjct: 71 EPKMAASLLN-PYVKRSVKVKSLSDMTAKEKFSPLTSNLINLLAENGRLTNTPAVISAFS 129
Query: 377 SIFEASKGNVRCIITTAKPIDEATEKEFIAALQLFVSKNQKIIVEKKIDKELIGGATVSI 556
++ +G V C +TTA +DE T E L+ F+SK Q + +E KID ++GG V I
Sbjct: 130 TMMSVHRGEVPCTVTTASALDETTLTELKTVLKSFLSKGQVLKLEVKIDPSIMGGMIVRI 189
Query: 557 GDKFVDMSVAKKVRMFQDVLERAL 628
G+K+VDMS K++ + L
Sbjct: 190 GEKYVDMSAKTKIQKLSRAMREIL 213
>sp|Q5RD23|ATPO_PONPY ATP synthase O subunit, mitochondrial precursor (Oligomycin
sensitivity conferral protein) (OSCP)
Length = 213
Score = 139 bits (350), Expect = 7e-33
Identities = 76/191 (39%), Positives = 117/191 (61%), Gaps = 3/191 (1%)
Frame = +2
Query: 35 RKFSTSVIH---HTVQVPIQLFGIEGRYATALYSAAVKLNQLEVVEGDVNKLKNVLKTDK 205
R FSTSV+ V+ P+Q++GIEGRYATALYSAA K N+LE VE ++ ++ +LK K
Sbjct: 14 RCFSTSVVRPFAKLVRPPVQVYGIEGRYATALYSAASKQNKLEQVEKELLRVAQILKEPK 73
Query: 206 KFLEFLNDPVLNRSLKSSAVQKALLKLNFSDPMKRFFDIMGKNGQLHRTVSILSSMDSIF 385
LN P + RS+K ++ K FS +++ +NG+L T ++S+ ++
Sbjct: 74 VAAPVLN-PYVKRSIKVKSLNDITAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMM 132
Query: 386 EASKGNVRCIITTAKPIDEATEKEFIAALQLFVSKNQKIIVEKKIDKELIGGATVSIGDK 565
A +G V C +T+A P++EAT E L+ F+S+ Q + +E K D ++GG V IG+K
Sbjct: 133 SAHRGEVPCTVTSASPLEEATLSELKTVLKSFLSQGQVLKLEAKTDPSILGGMIVRIGEK 192
Query: 566 FVDMSVAKKVR 598
+VDMSV K++
Sbjct: 193 YVDMSVKTKIQ 203
>sp|P48047|ATPO_HUMAN ATP synthase O subunit, mitochondrial precursor (Oligomycin
sensitivity conferral protein) (OSCP)
Length = 213
Score = 138 bits (347), Expect = 1e-32
Identities = 75/191 (39%), Positives = 116/191 (60%), Gaps = 3/191 (1%)
Frame = +2
Query: 35 RKFSTSVIH---HTVQVPIQLFGIEGRYATALYSAAVKLNQLEVVEGDVNKLKNVLKTDK 205
R FSTSV+ V+ P+Q++GIEGRYATALYSAA K N+LE VE ++ ++ +LK K
Sbjct: 14 RCFSTSVVRPFAKLVRPPVQVYGIEGRYATALYSAASKQNKLEQVEKELLRVAQILKEPK 73
Query: 206 KFLEFLNDPVLNRSLKSSAVQKALLKLNFSDPMKRFFDIMGKNGQLHRTVSILSSMDSIF 385
LN P + RS+K ++ K FS +++ +NG+L T ++S+ ++
Sbjct: 74 VAASVLN-PYVKRSIKVKSLNDITAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMM 132
Query: 386 EASKGNVRCIITTAKPIDEATEKEFIAALQLFVSKNQKIIVEKKIDKELIGGATVSIGDK 565
+G V C +T+A P++EAT E L+ F+S+ Q + +E K D ++GG V IG+K
Sbjct: 133 SVHRGEVPCTVTSASPLEEATLSELKTVLKSFLSQGQVLKLEAKTDPSILGGMIVRIGEK 192
Query: 566 FVDMSVAKKVR 598
+VDMSV K++
Sbjct: 193 YVDMSVKTKIQ 203
>sp|Q06647|ATPO_RAT ATP synthase O subunit, mitochondrial precursor (Oligomycin
sensitivity conferral protein) (OSCP)
Length = 213
Score = 137 bits (345), Expect = 3e-32
Identities = 77/201 (38%), Positives = 116/201 (57%), Gaps = 3/201 (1%)
Frame = +2
Query: 35 RKFSTSVIH---HTVQVPIQLFGIEGRYATALYSAAVKLNQLEVVEGDVNKLKNVLKTDK 205
R FSTSV+ V+ P+Q++GIEGRYATALYSAA K +L+ VE ++ ++ +LK K
Sbjct: 14 RSFSTSVVRPFSKLVRPPVQVYGIEGRYATALYSAASKQKRLDQVEKELLRVGQLLKDPK 73
Query: 206 KFLEFLNDPVLNRSLKSSAVQKALLKLNFSDPMKRFFDIMGKNGQLHRTVSILSSMDSIF 385
L LN P + RS+K +++ K FS +++ +NG+L T ++S+ +I
Sbjct: 74 VSLAVLN-PYIKRSIKVKSLKDITTKEKFSPLTANLMNLLAENGRLGNTQGVISAFSTIM 132
Query: 386 EASKGNVRCIITTAKPIDEATEKEFIAALQLFVSKNQKIIVEKKIDKELIGGATVSIGDK 565
+G V C +TTA P+DEA E L F+SK Q + +E K D ++GG V IG+K
Sbjct: 133 SVHRGEVPCTVTTAFPLDEAVLSELKTVLNSFLSKGQILNLEVKTDPSIMGGMIVRIGEK 192
Query: 566 FVDMSVAKKVRMFQDVLERAL 628
+VDMS K++ + L
Sbjct: 193 YVDMSAKSKIQKLSKAMRDLL 213
>sp|Q9DB20|ATPO_MOUSE ATP synthase O subunit, mitochondrial precursor (Oligomycin
sensitivity conferral protein) (OSCP)
Length = 213
Score = 134 bits (338), Expect = 2e-31
Identities = 75/201 (37%), Positives = 116/201 (57%), Gaps = 3/201 (1%)
Frame = +2
Query: 35 RKFSTSVIH---HTVQVPIQLFGIEGRYATALYSAAVKLNQLEVVEGDVNKLKNVLKTDK 205
R FSTSV+ V+ P+Q++GIEGRYATALYSAA K +L+ VE ++ ++ +LK K
Sbjct: 14 RSFSTSVVRPFAKLVRPPVQVYGIEGRYATALYSAASKEKKLDQVEKELLRVGQLLKDPK 73
Query: 206 KFLEFLNDPVLNRSLKSSAVQKALLKLNFSDPMKRFFDIMGKNGQLHRTVSILSSMDSIF 385
L LN P + R++K ++ + FS +++ +NG+L T I+S+ +I
Sbjct: 74 VSLAVLN-PYIKRTVKVKSLNDITKREKFSPLTANLMNLLAENGRLGNTQGIISAFSTIM 132
Query: 386 EASKGNVRCIITTAKPIDEATEKEFIAALQLFVSKNQKIIVEKKIDKELIGGATVSIGDK 565
+G V C +TTA P+D+A E L+ F+S NQ + +E K D ++GG V IG+K
Sbjct: 133 SVHRGEVPCTVTTASPLDDAVLSELKTVLKSFLSPNQILKLEIKTDPSIMGGMIVRIGEK 192
Query: 566 FVDMSVAKKVRMFQDVLERAL 628
+VDMS K++ + L
Sbjct: 193 YVDMSAKSKIQKLSKAMREML 213
>sp|Q96251|ATPO_ARATH ATP synthase delta chain, mitochondrial precursor (Oligomycin
sensitivity conferral protein) (OSCP)
Length = 238
Score = 125 bits (315), Expect = 8e-29
Identities = 67/200 (33%), Positives = 112/200 (56%), Gaps = 2/200 (1%)
Frame = +2
Query: 23 FQLARKFSTSVIHHT--VQVPIQLFGIEGRYATALYSAAVKLNQLEVVEGDVNKLKNVLK 196
F R ++T+ T V+VPI L G G +A+ LY AAVK+N LE +E D++++ +K
Sbjct: 30 FPALRTYATASAQTTANVKVPIALVGENGNFASWLYIAAVKMNSLEKIETDLSEMIEAMK 89
Query: 197 TDKKFLEFLNDPVLNRSLKSSAVQKALLKLNFSDPMKRFFDIMGKNGQLHRTVSILSSMD 376
T F +F DP + R + +A++ A + F++P K F ++ +NG+L +I+
Sbjct: 90 TAPIFAQFTKDPSVPRGTRLAAIRDACDQAKFAEPTKNFLSLLAENGKLKNLDAIVKKFM 149
Query: 377 SIFEASKGNVRCIITTAKPIDEATEKEFIAALQLFVSKNQKIIVEKKIDKELIGGATVSI 556
+ A +G+V+ ++TT P+ A EKE LQ + +KI VE+KID + GG V
Sbjct: 150 QLTNAHRGDVKVLVTTVIPLPPAEEKELTETLQEIIGAGKKITVEQKIDPSIYGGLIVEF 209
Query: 557 GDKFVDMSVAKKVRMFQDVL 616
K +DMS+ + + + +L
Sbjct: 210 QQKVLDMSIRTRAQQMERLL 229
>sp|P22778|ATPO_IPOBA ATP synthase delta chain, mitochondrial precursor (Oligomycin
sensitivity conferral protein) (OSCP)
Length = 244
Score = 119 bits (299), Expect = 5e-27
Identities = 64/204 (31%), Positives = 107/204 (52%), Gaps = 2/204 (0%)
Frame = +2
Query: 26 QLARKFSTSVI--HHTVQVPIQLFGIEGRYATALYSAAVKLNQLEVVEGDVNKLKNVLKT 199
+L R ++T+ ++VP+ ++G+ G YA+ALY AAVK N LE VE ++ L K
Sbjct: 40 ELLRNYATASASKEQKIKVPLTMYGVSGNYASALYLAAVKSNTLEKVESELYDLVEASKK 99
Query: 200 DKKFLEFLNDPVLNRSLKSSAVQKALLKLNFSDPMKRFFDIMGKNGQLHRTVSILSSMDS 379
F +F+ DP + + +A+++ + F D + F I+ +NG+L I+
Sbjct: 100 SPTFSQFMRDPSVPVDTRVNAIKEICAQAKFGDTTQNFLLILAENGRLKHIDRIVKRFKE 159
Query: 380 IFEASKGNVRCIITTAKPIDEATEKEFIAALQLFVSKNQKIIVEKKIDKELIGGATVSIG 559
+ A +G V+ +TT P+ EKE A LQ V + + + +E+KID ++GG V G
Sbjct: 160 LTMAHRGEVKATVTTVIPLPADEEKELKATLQEMVGQGKSVQIEQKIDPTILGGLVVEFG 219
Query: 560 DKFVDMSVAKKVRMFQDVLERALS 631
K DMS+ + R + L L+
Sbjct: 220 QKVFDMSIRTRARQMERFLREPLN 243
>sp|Q9P602|ATPO_NEUCR ATP synthase subunit 5, mitochondrial precursor (Oligomycin
sensitivity conferral protein) (OSCP) (ATP synthase
chain 5)
Length = 220
Score = 113 bits (283), Expect = 4e-25
Identities = 62/190 (32%), Positives = 106/190 (55%), Gaps = 3/190 (1%)
Frame = +2
Query: 68 VQVPIQLFGIEGRYATALYSAAVKLNQLEVVEGDVNKLKNVLKTDKKFLEFLNDPVLNRS 247
V+ P+ LFG++G YATALY+AAVK + LE ++ L N+L D K L P L+ +
Sbjct: 31 VKPPVTLFGLDGTYATALYTAAVKTSALEPTAKAISSLGNLLAKDPKLASILETPTLSPA 90
Query: 248 LKSSAVQKALLKLNFS-DPMKRFFDIMGKNGQLHRTVSILSSMDSIFEASKGNVRCIITT 424
KS+ V + + S + +K F + +N +L S+++ + A++G V ++T+
Sbjct: 91 DKSAIVAELQKSVGVSNETVKNFLATLAENNRLGLLPSVVAKFSELMSAARGEVEMVVTS 150
Query: 425 AKPIDEAT--EKEFIAALQLFVSKNQKIIVEKKIDKELIGGATVSIGDKFVDMSVAKKVR 598
A+P+D T E A +V +K+ V K++ ++IGG V IG++ +D+SV+ K+
Sbjct: 151 AQPLDNKTLNRLESAVAKSPYVGSGKKLKVTNKVNADIIGGLVVEIGERTIDLSVSSKIA 210
Query: 599 MFQDVLERAL 628
+L AL
Sbjct: 211 KMNKLLSEAL 220
>sp|O74190|ATPO_KLULA ATP synthase subunit 5, mitochondrial precursor (Oligomycin
sensitivity conferral protein) (OSCP) (ATP synthase
chain 5)
Length = 206
Score = 105 bits (262), Expect = 1e-22
Identities = 56/189 (29%), Positives = 95/189 (50%), Gaps = 2/189 (1%)
Frame = +2
Query: 68 VQVPIQLFGIEGRYATALYSAAVKLNQLEVVEGDVNKLKNVLKTDKKFLEFLNDPVLNRS 247
V+ P+QLFG++G YATAL++AA K +E +N LK + D K L +P L+
Sbjct: 18 VKPPVQLFGLDGTYATALFTAASKTTSVEAAASSLNALKETVAKDTKLTSILENPALSAE 77
Query: 248 LKSSAVQKALLKLNFSDPMKRFFDIMGKNGQLHRTVSILSSMDSIFEASKGNVRCIITTA 427
++ V K+N ++ ++ +N +L + S + +A G V+ +TTA
Sbjct: 78 DRNIVVDTLSKKINLDQSVQNLLKVLAENNRLSLLEHVTSQFSKLTDAYHGLVQATVTTA 137
Query: 428 KPIDEATEK--EFIAALQLFVSKNQKIIVEKKIDKELIGGATVSIGDKFVDMSVAKKVRM 601
+P+D K E A V K + + +E + E+ GG V + D+ VD+S+A ++
Sbjct: 138 QPLDSKLFKRVEKALAASSLVGKGKSLKLENVVKPEIQGGLIVEVSDRTVDLSIASRINK 197
Query: 602 FQDVLERAL 628
VL A+
Sbjct: 198 LNQVLREAI 206
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,259,041
Number of Sequences: 369166
Number of extensions: 1117545
Number of successful extensions: 3123
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3108
length of database: 68,354,980
effective HSP length: 106
effective length of database: 48,773,070
effective search space used: 5657676120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)