Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_006_I02
(558 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 172 7e-43
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 172 7e-43
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 172 7e-43
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 169 4e-42
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 166 3e-41
sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein 166 3e-41
sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein 165 8e-41
sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (... 164 1e-40
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 164 1e-40
sp|Q05944|HSP70_HYDMA Heat shock 70 kDa protein 164 1e-40
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 172 bits (435), Expect = 7e-43
Identities = 87/159 (54%), Positives = 106/159 (66%)
Frame = +3
Query: 3 VSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAY 182
VSAV+K TGKENKITITNDKGRLSK+DIERMV ++++KNSLESYA+
Sbjct: 488 VSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAF 547
Query: 183 QMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIM 362
MKATVEDEKL+ KI++ D++ I+DKC E I WLDKNQ A K+EF++ KELEKVCNPI+
Sbjct: 548 NMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPII 607
Query: 363 TKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 479
TK+YQ GPT+EEVD
Sbjct: 608 TKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 172 bits (435), Expect = 7e-43
Identities = 87/159 (54%), Positives = 106/159 (66%)
Frame = +3
Query: 3 VSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAY 182
VSAV+K TGKENKITITNDKGRLSK+DIERMV ++++KNSLESYA+
Sbjct: 488 VSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAF 547
Query: 183 QMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIM 362
MKATVEDEKL+ KI++ D++ I+DKC E I WLDKNQ A K+EF++ KELEKVCNPI+
Sbjct: 548 NMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPII 607
Query: 363 TKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 479
TK+YQ GPT+EEVD
Sbjct: 608 TKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 172 bits (435), Expect = 7e-43
Identities = 87/159 (54%), Positives = 106/159 (66%)
Frame = +3
Query: 3 VSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAY 182
VSAV+K TGKENKITITNDKGRLSK+DIERMV ++++KNSLESYA+
Sbjct: 488 VSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAF 547
Query: 183 QMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIM 362
MKATVEDEKL+ KI++ D++ I+DKC E I WLDKNQ A K+EF++ KELEKVCNPI+
Sbjct: 548 NMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPII 607
Query: 363 TKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 479
TK+YQ GPT+EEVD
Sbjct: 608 TKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 169 bits (428), Expect = 4e-42
Identities = 88/162 (54%), Positives = 106/162 (65%), Gaps = 3/162 (1%)
Frame = +3
Query: 3 VSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAY 182
VSAV+K TGKENKITITNDKGRLSK+DIERMV +++AKN LESYA+
Sbjct: 488 VSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAF 547
Query: 183 QMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIM 362
MK+TVEDEKLK KIS+ D++ I+DKC E IGWLDKNQ A ++EF++ KELEKVCNPI+
Sbjct: 548 NMKSTVEDEKLKGKISDEDKQKILDKCNEVIGWLDKNQTAEREEFEHQQKELEKVCNPII 607
Query: 363 TKMYQ---XXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 479
TK+YQ GPT+EEVD
Sbjct: 608 TKLYQSAGGMPGGMPEGMPGGFPGAGAAPGGGSSGPTIEEVD 649
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 166 bits (421), Expect = 3e-41
Identities = 86/164 (52%), Positives = 106/164 (64%), Gaps = 5/164 (3%)
Frame = +3
Query: 3 VSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAY 182
VSA +K TGKENKITITNDKGRLSK+DIERMV ++++KNSLESYA+
Sbjct: 488 VSAADKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKCEDDVQRDKVSSKNSLESYAF 547
Query: 183 QMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIM 362
MK+TVEDEKL+ KIS+ D+ I++KC E IGWLDKNQ A K+E+++H KELEKVCNPI+
Sbjct: 548 NMKSTVEDEKLQGKISDEDKTKILEKCNEVIGWLDKNQTAEKEEYEHHQKELEKVCNPII 607
Query: 363 TKMYQ-----XXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 479
TK+YQ GPT+EEVD
Sbjct: 608 TKLYQGAGGMPGGMPEGMAGGFPGAGGAAPGGGGSSGPTIEEVD 651
>sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein
Length = 649
Score = 166 bits (421), Expect = 3e-41
Identities = 87/162 (53%), Positives = 104/162 (64%), Gaps = 3/162 (1%)
Frame = +3
Query: 3 VSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAY 182
VSAV+K TGKENKITITNDKGRLSK+DIERMV +++AKN LESYA+
Sbjct: 488 VSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAF 547
Query: 183 QMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIM 362
MK+TVEDEKLK KIS+ D+ I+DKC E I WLDKNQ A KDE+++ K+LEKVCNPI+
Sbjct: 548 NMKSTVEDEKLKGKISDEDKHKILDKCNEVISWLDKNQTAEKDEYEHQQKDLEKVCNPII 607
Query: 363 TKMYQ---XXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 479
TK+YQ GPT+EEVD
Sbjct: 608 TKLYQSDGGMPGGMPDGMPGGFQELGAAPGGGSSGPTIEEVD 649
>sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein
Length = 644
Score = 165 bits (417), Expect = 8e-41
Identities = 88/159 (55%), Positives = 102/159 (64%)
Frame = +3
Query: 3 VSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAY 182
VSA +K TGK+NKITITNDKGRLSKD+IERMV RIAAKN+LESYA+
Sbjct: 487 VSAQDKSTGKQNKITITNDKGRLSKDEIERMVQEAEKYKADDEAQKDRIAAKNALESYAF 546
Query: 183 QMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIM 362
MK T+EDEKLKDKISE D+K I +KC E + WLD NQ A KDEF++ KELE VCNPI+
Sbjct: 547 NMKQTIEDEKLKDKISEEDKKKIQEKCDETVRWLDGNQTAEKDEFEHRQKELESVCNPII 606
Query: 363 TKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 479
TK+YQ GPT+EEVD
Sbjct: 607 TKLYQSAGGMPGGMPGGMPGGAPGAGSTG-GGPTIEEVD 644
>sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (Heat shock 70 kDa protein 2)
Length = 639
Score = 164 bits (416), Expect = 1e-40
Identities = 85/159 (53%), Positives = 103/159 (64%)
Frame = +3
Query: 3 VSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAY 182
V+A +K TGKENKITITNDKGRLSKDDI+RMV R+AAKN+LESY Y
Sbjct: 491 VTAADKSTGKENKITITNDKGRLSKDDIDRMVQEAERYKSEDEANRDRVAAKNALESYTY 550
Query: 183 QMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIM 362
+K TVEDEKL+ KISE D+ I+DKCQE I WLD+NQ A KDE+++ KELE+VCNPI+
Sbjct: 551 NIKQTVEDEKLRGKISEQDKNKILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPII 610
Query: 363 TKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 479
+K+YQ GPT+EEVD
Sbjct: 611 SKLYQ----------GGPGGGSGGGGSGASGGPTIEEVD 639
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 164 bits (416), Expect = 1e-40
Identities = 86/163 (52%), Positives = 106/163 (65%), Gaps = 4/163 (2%)
Frame = +3
Query: 3 VSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAY 182
VSAV+K TGKENKITITNDKGRLSK+DIERMV ++++KNSL+SYA+
Sbjct: 488 VSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLKSYAF 547
Query: 183 QMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIM 362
MKATVEDEKL+ KI++ D++ I+DKC E I WLDKNQ A K+EF++ KELEKVCNPI+
Sbjct: 548 NMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPII 607
Query: 363 TKMYQ----XXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 479
TK+YQ GPT+EEVD
Sbjct: 608 TKLYQSAGGMPGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 650
>sp|Q05944|HSP70_HYDMA Heat shock 70 kDa protein
Length = 654
Score = 164 bits (415), Expect = 1e-40
Identities = 85/160 (53%), Positives = 102/160 (63%), Gaps = 1/160 (0%)
Frame = +3
Query: 3 VSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAY 182
VSA++K TGKENKITITNDKGRLSK+DIERMV ++ AKNSLESY Y
Sbjct: 495 VSALDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKADDELQRDKVQAKNSLESYCY 554
Query: 183 QMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIM 362
MK TVEDEK+K KISE D+K I+ KC E + W+DKNQ A KD++++ KELEKVCNPI+
Sbjct: 555 NMKQTVEDEKVKGKISEEDKKTIIKKCNETVEWVDKNQTAEKDQYEHKQKELEKVCNPII 614
Query: 363 TKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQ-GPTVEEVD 479
TK+YQ GPT+EEVD
Sbjct: 615 TKLYQAGGGMPGGMPGGMPGGMPGSGSKASSGGPTIEEVD 654
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,202,511
Number of Sequences: 369166
Number of extensions: 455165
Number of successful extensions: 2004
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1823
length of database: 68,354,980
effective HSP length: 104
effective length of database: 49,142,540
effective search space used: 3980545740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)