Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_006_H18
(880 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q19673|TYR3_CAEEL Putative tyrosinase-like protein tyr-3... 124 3e-28
sp|Q19269|NAS14_CAEEL Zinc metalloproteinase nas-14 precurs... 69 1e-11
sp|Q63722|JAG1_RAT Jagged-1 precursor (Jagged1) 69 2e-11
sp|Q9QXX0|JAG1_MOUSE Jagged-1 precursor (Jagged1) 69 2e-11
sp|Q20191|NAS13_CAEEL Zinc metalloproteinase nas-13 precurs... 67 9e-11
sp|P78504|JAG1_HUMAN Jagged-1 precursor (Jagged1) (hJ1) (CD... 65 2e-10
sp|Q9IAT6|DLLC_BRARE Delta-like protein C precursor (DeltaC... 61 4e-09
sp|P34269|TYR1_CAEEL Putative tyrosinase-like protein tyr-1... 60 8e-09
sp|Q9QW30|NOTC2_RAT Neurogenic locus notch homolog protein ... 58 3e-08
sp|Q14162|SREC_HUMAN Endothelial cells scavenger receptor p... 58 4e-08
>sp|Q19673|TYR3_CAEEL Putative tyrosinase-like protein tyr-3 precursor
Length = 683
Score = 124 bits (311), Expect = 3e-28
Identities = 66/200 (33%), Positives = 88/200 (44%), Gaps = 35/200 (17%)
Frame = +1
Query: 253 CSDYNRNCTKWAREGLCKKNFNFMQKNCKFSCDACQDIGDGDNSNPNCLNSHESCDTWAD 432
C + N C W+ +G C+KN +M CK SC C N N C + H +C W+
Sbjct: 462 CFNENECCGPWSAKGECQKNPVYMNVWCKASCRQCTP---NYNINEECSDRHTNCAMWSR 518
Query: 433 RGECASNPGYMLVSCKKACNVCGKENK--------------------------------- 513
GEC NP +M +C+ +C CG+
Sbjct: 519 SGECNKNPLWMSENCRSSCQKCGRSRAATCGGGGGADSISNPTTMPPATNNGQQNTPCDS 578
Query: 514 --CADYRKRCPIMAKYGLCESDPRFMLQNCKESCGVCDGSSKNRPCVDANQDCAGWAASH 687
C + + CPI A+ G C S+P +M CK SCGVC + PC D + DCA WA
Sbjct: 579 PMCYNEDQCCPIWAQRGQCRSNPGYMTCQCKVSCGVCRPNYVYGPCADYHYDCAAWARRG 638
Query: 688 ECETNPSWMLYNCKKSCNHC 747
EC N WM NC++SCN C
Sbjct: 639 ECLKN-KWMPENCRRSCNTC 657
Score = 110 bits (276), Expect = 4e-24
Identities = 62/199 (31%), Positives = 84/199 (42%), Gaps = 36/199 (18%)
Frame = +1
Query: 391 NCLNSHESCDTWADRGECASNPGYMLVSCKKACNVCGKE----NKCADYRKRCPIMAKYG 558
+C N +E C W+ +GEC NP YM V CK +C C +C+D C + ++ G
Sbjct: 461 SCFNENECCGPWSAKGECQKNPVYMNVWCKASCRQCTPNYNINEECSDRHTNCAMWSRSG 520
Query: 559 LCESDPRFMLQNCKESCGVCDGS---------------------------SKNRPC---- 645
C +P +M +NC+ SC C S +N PC
Sbjct: 521 ECNKNPLWMSENCRSSCQKCGRSRAATCGGGGGADSISNPTTMPPATNNGQQNTPCDSPM 580
Query: 646 -VDANQDCAGWAASHECETNPSWMLYNCKKSCNHCRDARLESISDPNCKDLQIHCLYWAN 822
+ +Q C WA +C +NP +M CK SC CR + P C D C WA
Sbjct: 581 CYNEDQCCPIWAQRGQCRSNPGYMTCQCKVSCGVCRP---NYVYGP-CADYHYDCAAWAR 636
Query: 823 AGECQLNPGWAKQNCPFSC 879
GEC N W +NC SC
Sbjct: 637 RGECLKNK-WMPENCRRSC 654
Score = 108 bits (271), Expect = 1e-23
Identities = 62/209 (29%), Positives = 86/209 (41%), Gaps = 41/209 (19%)
Frame = +1
Query: 16 NQYCQEWKKSGYCEKEPNTMKEYCSKTCGFCESETE-DPNCIDRDRNCQMWSDRGECGIN 192
N+ C W G C+K P M +C +C C + C DR NC MWS GEC N
Sbjct: 466 NECCGPWSAKGECQKNPVYMNVWCKASCRQCTPNYNINEECSDRHTNCAMWSRSGECNKN 525
Query: 193 PEAMLVTCKKTCNQCG--------------------------NPGK---------CSDYN 267
P M C+ +C +CG N G+ C + +
Sbjct: 526 PLWMSENCRSSCQKCGRSRAATCGGGGGADSISNPTTMPPATNNGQQNTPCDSPMCYNED 585
Query: 268 RNCTKWAREGLCKKNFNFMQKNCKFSCDACQDIGDGDNSNPN-----CLNSHESCDTWAD 432
+ C WA+ G C+ N +M CK SC C+ PN C + H C WA
Sbjct: 586 QCCPIWAQRGQCRSNPGYMTCQCKVSCGVCR---------PNYVYGPCADYHYDCAAWAR 636
Query: 433 RGECASNPGYMLVSCKKACNVCGKENKCA 519
RGEC N +M +C+++CN C + + A
Sbjct: 637 RGECLKNK-WMPENCRRSCNTCVNQQQLA 664
Score = 89.0 bits (219), Expect = 2e-17
Identities = 48/155 (30%), Positives = 66/155 (42%), Gaps = 36/155 (23%)
Frame = +1
Query: 1 CEDKPNQYCQEWKKSGYCEKEPNTMKEYCSKTCGFC------------------------ 108
C D+ C W +SG C K P M E C +C C
Sbjct: 506 CSDRHTN-CAMWSRSGECNKNPLWMSENCRSSCQKCGRSRAATCGGGGGADSISNPTTMP 564
Query: 109 --------ESETEDPNCIDRDRNCQMWSDRGECGINPEAMLVTCKKTCNQCGNP----GK 252
+ + P C + D+ C +W+ RG+C NP M CK +C C P G
Sbjct: 565 PATNNGQQNTPCDSPMCYNEDQCCPIWAQRGQCRSNPGYMTCQCKVSCGVC-RPNYVYGP 623
Query: 253 CSDYNRNCTKWAREGLCKKNFNFMQKNCKFSCDAC 357
C+DY+ +C WAR G C KN +M +NC+ SC+ C
Sbjct: 624 CADYHYDCAAWARRGECLKN-KWMPENCRRSCNTC 657
>sp|Q19269|NAS14_CAEEL Zinc metalloproteinase nas-14 precursor (Nematode astacin 14)
Length = 503
Score = 69.3 bits (168), Expect = 1e-11
Identities = 41/125 (32%), Positives = 53/125 (42%), Gaps = 6/125 (4%)
Frame = +1
Query: 1 CEDKPNQYCQEWKKSGYCEKEPNTMKEYCSKTCGFCESE-----TEDPNCIDRDRNCQMW 165
CED N +C W++ G+C+ M YC K C CE E T P + R++ +
Sbjct: 380 CEDL-NAHCGMWEQLGHCQHSVKYMAHYCRKACNLCEVEVTTTTTTTPKPVPRNKEKENK 438
Query: 166 SDRGECGINPEAMLVTCKKTCNQCGNPG-KCSDYNRNCTKWAREGLCKKNFNFMQKNCKF 342
S A T K T P KC D N C+ WA+ G C FM+ CK
Sbjct: 439 SASSTTRGTSTATSTTPKTTTTTTSAPKEKCEDKNLFCSYWAKIGECNSESKFMKIFCKA 498
Query: 343 SCDAC 357
SC C
Sbjct: 499 SCGKC 503
Score = 57.4 bits (137), Expect = 5e-08
Identities = 36/144 (25%), Positives = 57/144 (39%), Gaps = 2/144 (1%)
Frame = +1
Query: 193 PEAMLVTCKKTCNQCGNPGKCSDYNRNCTKWAREGLCKKNFNFMQKNCKFSCDACQ-DIG 369
P T K + N KC D N +C W + G C+ + +M C+ +C+ C+ ++
Sbjct: 361 PTTTTTTTPKPVERSRNK-KCEDLNAHCGMWEQLGHCQHSVKYMAHYCRKACNLCEVEVT 419
Query: 370 DGDNSNPNCL-NSHESCDTWADRGECASNPGYMLVSCKKACNVCGKENKCADYRKRCPIM 546
+ P + + E + A ++ + KC D C
Sbjct: 420 TTTTTTPKPVPRNKEKENKSASSTTRGTSTATSTTPKTTTTTTSAPKEKCEDKNLFCSYW 479
Query: 547 AKYGLCESDPRFMLQNCKESCGVC 618
AK G C S+ +FM CK SCG C
Sbjct: 480 AKIGECNSESKFMKIFCKASCGKC 503
Score = 52.8 bits (125), Expect = 1e-06
Identities = 35/137 (25%), Positives = 47/137 (34%), Gaps = 16/137 (11%)
Frame = +1
Query: 385 NPNCLNSHESCDTWADRGECASNPGYMLVSCKKACNVCGKENKCADYRKRCPIMAKYGLC 564
N C + + C W G C + YM C+KACN+C E P+
Sbjct: 377 NKKCEDLNAHCGMWEQLGHCQHSVKYMAHYCRKACNLCEVEVTTTTTTTPKPV------- 429
Query: 565 ESDPRFMLQNCKESCGVCDGSSK----------------NRPCVDANQDCAGWAASHECE 696
PR + K + G+S C D N C+ WA EC
Sbjct: 430 ---PRNKEKENKSASSTTRGTSTATSTTPKTTTTTTSAPKEKCEDKNLFCSYWAKIGECN 486
Query: 697 TNPSWMLYNCKKSCNHC 747
+ +M CK SC C
Sbjct: 487 SESKFMKIFCKASCGKC 503
Score = 48.1 bits (113), Expect = 3e-05
Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 5/131 (3%)
Frame = +1
Query: 502 KENKCADYRKRCPIMAKYGLCESDPRFMLQNCKESCGVCD-----GSSKNRPCVDANQDC 666
+ KC D C + + G C+ ++M C+++C +C+ ++ V N++
Sbjct: 376 RNKKCEDLNAHCGMWEQLGHCQHSVKYMAHYCRKACNLCEVEVTTTTTTTPKPVPRNKEK 435
Query: 667 AGWAASHECETNPSWMLYNCKKSCNHCRDARLESISDPNCKDLQIHCLYWANAGECQLNP 846
+AS S K+ A E C+D + C YWA GEC
Sbjct: 436 ENKSAS-STTRGTSTATSTTPKTTTTTTSAPKE-----KCEDKNLFCSYWAKIGECNSES 489
Query: 847 GWAKQNCPFSC 879
+ K C SC
Sbjct: 490 KFMKIFCKASC 500
Score = 46.6 bits (109), Expect = 9e-05
Identities = 31/139 (22%), Positives = 50/139 (35%), Gaps = 12/139 (8%)
Frame = +1
Query: 118 TEDPNCIDRDRNCQMWSDRGECGINPEAMLVTCKKTCNQCGNPGKCSDYNRNCTKWAREG 297
+ + C D + +C MW G C + + M C+K CN C + T
Sbjct: 375 SRNKKCEDLNAHCGMWEQLGHCQHSVKYMAHYCRKACNLC-------EVEVTTTTTTTPK 427
Query: 298 LCKKNFNFMQKNCKFSCDACQDIGDGDNSNP------------NCLNSHESCDTWADRGE 441
+N +K K + + ++ P C + + C WA GE
Sbjct: 428 PVPRN---KEKENKSASSTTRGTSTATSTTPKTTTTTTSAPKEKCEDKNLFCSYWAKIGE 484
Query: 442 CASNPGYMLVSCKKACNVC 498
C S +M + CK +C C
Sbjct: 485 CNSESKFMKIFCKASCGKC 503
Score = 30.8 bits (68), Expect = 5.2
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +1
Query: 760 LESISDPNCKDLQIHCLYWANAGECQLNPGWAKQNCPFSC 879
+E + C+DL HC W G CQ + + C +C
Sbjct: 372 VERSRNKKCEDLNAHCGMWEQLGHCQHSVKYMAHYCRKAC 411
>sp|Q63722|JAG1_RAT Jagged-1 precursor (Jagged1)
Length = 1219
Score = 68.9 bits (167), Expect = 2e-11
Identities = 69/306 (22%), Positives = 109/306 (35%), Gaps = 17/306 (5%)
Frame = +1
Query: 1 CEDKPNQYCQEWKKSGYCEKEPNTMKEYCSKTCG-----------------FCESETEDP 129
C+ N+ C E C K ++ CS G +C+ P
Sbjct: 212 CDQNGNKTCMEGWMGPECNKA--ICRQGCSPKHGSCKLPGDCRCQYGWQGLYCDKCIPHP 269
Query: 130 NCIDRDRNCQMWSDRGECGINPEAMLVTCKKTCNQCGNPGKCSDYNRNCTKWAREGLCKK 309
C+ N + W C N L C K N CG C + + C
Sbjct: 270 GCVHGTCN-EPWQCL--CETNWGGQL--CDKDLNYCGTHQPCLNRGTCSNTGPDKYQCSC 324
Query: 310 NFNFMQKNCKFSCDACQDIGDGDNSNPNCLNSHESCDTWADRGECASNPGYMLVSCKKAC 489
+ NC+ + AC S+P ++ SC + EC +PG+ +C
Sbjct: 325 PEGYSGPNCEIAEHACL-------SDP--CHNRGSCKETSSGFECECSPGWTGPTCSTNI 375
Query: 490 NVCGKENKCADYRKRCPIMAKYGLCESDPRFMLQNCKESCGVCDGSSKNRPCVDANQDCA 669
+ C N + C + C P++ + C+ C+ +PCV+A + C
Sbjct: 376 DDCSPNN--CSHGGTCQDLVNGFKCVCPPQWTGKTCQLDANECEA----KPCVNA-RSCK 428
Query: 670 GWAASHECETNPSWMLYNCKKSCNHCRDARLESISDPNCKDLQIHCLYWANAGECQLNPG 849
AS+ C+ P WM NC + N C + +D +C+DL N C PG
Sbjct: 429 NLIASYYCDCLPGWMGQNCDININDCLG---QCQNDASCRDL-------VNGYRCICPPG 478
Query: 850 WAKQNC 867
+A +C
Sbjct: 479 YAGDHC 484
Score = 55.8 bits (133), Expect = 2e-07
Identities = 69/312 (22%), Positives = 113/312 (36%), Gaps = 23/312 (7%)
Frame = +1
Query: 1 CEDKP---NQYCQEWKKSGYCEKEPNTMKEYCSKTCGFCESETE-DPNCIDRDRNCQMWS 168
CE KP + C+ S YC+ P M + C C + + D +C D +
Sbjct: 416 CEAKPCVNARSCKNLIASYYCDCLPGWMGQNCDININDCLGQCQNDASCRDLVNGYRCIC 475
Query: 169 DRGECGINPEAMLVTCKKTCNQCGNPGKC-SDYNRN---CTKWAREGLCKKNFNFMQKN- 333
G G + E + C N C N G C ++ NR C LC+ + ++ + N
Sbjct: 476 PPGYAGDHCERDIDECAS--NPCLNGGHCQNEINRFQCLCPTGFSGNLCQLDIDYCEPNP 533
Query: 334 CKFSCDACQDIGDGDNSNPNCLNSHESCDTWADRGECASNPGYMLVSCKKAC-------- 489
C+ + Q + C +E + + C + P ++ SC A
Sbjct: 534 CQ---NGAQCYNRASDYFCKCPEDYEGKNCSHLKDHCRTTPCEVIDSCTVAMASNDTPEG 590
Query: 490 ------NVCGKENKCADYRKRCPIMAKYGLCESDPRFMLQNCKESCGVCDGSSKNRPCVD 651
NVCG KC + K+ C+ + F C E+ C+G+ PC +
Sbjct: 591 VRYISSNVCGPHGKC-----KSESGGKF-TCDCNKGFTGTYCHENINDCEGN----PCTN 640
Query: 652 ANQDCAGWAASHECETNPSWMLYNCKKSCNHCRDARLESISDPNCKDLQIHCLYWANAGE 831
C S++C + W +C+ + N C ++ C+DL N
Sbjct: 641 GGT-CIDGVNSYKCICSDGWEGAHCENNINDC--SQNPCHYGGTCRDL-------VNDFY 690
Query: 832 CQLNPGWAKQNC 867
C GW + C
Sbjct: 691 CDCKNGWKGKTC 702
Score = 49.3 bits (116), Expect = 1e-05
Identities = 55/258 (21%), Positives = 84/258 (32%), Gaps = 9/258 (3%)
Frame = +1
Query: 25 CQEWKKSGYCEKEPNTMKEYCSKTCGFCESETEDPNCIDRDRNCQMWSDRGECGINPEAM 204
C+E CE P CS C PN CQ + +C P+
Sbjct: 351 CKETSSGFECECSPGWTGPTCSTNIDDCS-----PNNCSHGGTCQDLVNGFKCVCPPQWT 405
Query: 205 LVTCKKTCNQCGNPGKCSDYNRNCTKWAREGLCKKNFNFMQKNCKFSCDACQDIGDGDNS 384
TC+ N+C K R+C C +M +NC + + C D S
Sbjct: 406 GKTCQLDANEC--EAKPCVNARSCKNLIASYYCDCLPGWMGQNCDININDCLGQCQNDAS 463
Query: 385 NPNCLNSHESCDTWADRGECASNPGYMLVSCKKACNVCGK---------ENKCADYRKRC 537
+ +N + C PGY C++ + C +N+ ++ C
Sbjct: 464 CRDLVNGYR----------CICPPGYAGDHCERDIDECASNPCLNGGHCQNEINRFQCLC 513
Query: 538 PIMAKYGLCESDPRFMLQNCKESCGVCDGSSKNRPCVDANQDCAGWAASHECETNPSWML 717
P LC+ D + N PC + Q C A+ + C+ +
Sbjct: 514 PTGFSGNLCQLDIDYCEPN---------------PCQNGAQ-CYNRASDYFCKCPEDYEG 557
Query: 718 YNCKKSCNHCRDARLESI 771
NC +HCR E I
Sbjct: 558 KNCSHLKDHCRTTPCEVI 575
>sp|Q9QXX0|JAG1_MOUSE Jagged-1 precursor (Jagged1)
Length = 1218
Score = 68.6 bits (166), Expect = 2e-11
Identities = 69/306 (22%), Positives = 109/306 (35%), Gaps = 17/306 (5%)
Frame = +1
Query: 1 CEDKPNQYCQEWKKSGYCEKEPNTMKEYCSKTCG-----------------FCESETEDP 129
C+ N+ C E C K ++ CS G +C+ P
Sbjct: 212 CDQNGNKTCMEGWMGPDCNKA--ICRQGCSPKHGSCKLPGDCRCQYGWQGLYCDKCIPHP 269
Query: 130 NCIDRDRNCQMWSDRGECGINPEAMLVTCKKTCNQCGNPGKCSDYNRNCTKWAREGLCKK 309
C+ N + W C N L C K N CG C + + C
Sbjct: 270 GCVHGTCN-EPWQCL--CETNWGGQL--CDKDLNYCGTHQPCLNRGTCSNTGPDKYQCSC 324
Query: 310 NFNFMQKNCKFSCDACQDIGDGDNSNPNCLNSHESCDTWADRGECASNPGYMLVSCKKAC 489
+ NC+ + AC S+P ++ SC + EC +PG+ +C
Sbjct: 325 PEGYSGPNCEIAEHACL-------SDP--CHNRGSCKETSSGFECECSPGWTGPTCSTNI 375
Query: 490 NVCGKENKCADYRKRCPIMAKYGLCESDPRFMLQNCKESCGVCDGSSKNRPCVDANQDCA 669
+ C N + C + C P++ + C+ C+ +PCV+A + C
Sbjct: 376 DDCSPNN--CSHGGTCQDLVNGFKCVCPPQWTGKTCQLDANECEA----KPCVNA-RSCK 428
Query: 670 GWAASHECETNPSWMLYNCKKSCNHCRDARLESISDPNCKDLQIHCLYWANAGECQLNPG 849
AS+ C+ P WM NC + N C + +D +C+DL N C PG
Sbjct: 429 NLIASYYCDCLPGWMGQNCDININDCLG---QCQNDASCRDL-------VNGYRCICPPG 478
Query: 850 WAKQNC 867
+A +C
Sbjct: 479 YAGDHC 484
Score = 50.4 bits (119), Expect = 6e-06
Identities = 72/313 (23%), Positives = 110/313 (35%), Gaps = 24/313 (7%)
Frame = +1
Query: 1 CEDKP---NQYCQEWKKSGYCEKEPNTMKEYCSKTCGFCESETE-DPNCIDRDRNCQMWS 168
CE KP + C+ S YC+ P M + C C + + D +C D +
Sbjct: 416 CEAKPCVNARSCKNLIASYYCDCLPGWMGQNCDININDCLGQCQNDASCRDLVNGYRCIC 475
Query: 169 DRGECGINPEAMLVTCKKTCNQCGNPGKC-SDYNRN---CTKWAREGLCKKNFNFMQKN- 333
G G + E + C N C N G C ++ NR C LC+ + ++ + N
Sbjct: 476 PPGYAGDHCERDIDECAS--NPCLNGGHCQNEINRFQCLCPTGFSGNLCQLDIDYCEPNP 533
Query: 334 CKFSCDACQDIGD------GDNSNPNCLNSHESCDTWADR--GEC----ASNP---GYML 468
C+ D D NC + + C T C ASN G
Sbjct: 534 CQNGAQCYNRASDYFCKCPEDYEGKNCSHLKDHCRTTTCEVIDSCTVAMASNDTPEGVRY 593
Query: 469 VSCKKACNVCGKENKCADYRKRCPIMAKYGLCESDPRFMLQNCKESCGVCDGSSKNRPCV 648
+S NVCG KC K+ C+ + F C E+ C+ + PC
Sbjct: 594 ISS----NVCGPHGKCKSQSG-----GKF-TCDCNKGFTGTYCHENINDCESN----PCK 639
Query: 649 DANQDCAGWAASHECETNPSWMLYNCKKSCNHCRDARLESISDPNCKDLQIHCLYWANAG 828
+ C S++C + W +C+ + N C ++ C+DL N
Sbjct: 640 NGGT-CIDGVNSYKCICSDGWEGAHCENNINDC--SQNPCHYGGTCRDL-------VNDF 689
Query: 829 ECQLNPGWAKQNC 867
C GW + C
Sbjct: 690 YCDCKNGWKGKTC 702
Score = 49.7 bits (117), Expect = 1e-05
Identities = 55/258 (21%), Positives = 84/258 (32%), Gaps = 9/258 (3%)
Frame = +1
Query: 25 CQEWKKSGYCEKEPNTMKEYCSKTCGFCESETEDPNCIDRDRNCQMWSDRGECGINPEAM 204
C+E CE P CS C PN CQ + +C P+
Sbjct: 351 CKETSSGFECECSPGWTGPTCSTNIDDCS-----PNNCSHGGTCQDLVNGFKCVCPPQWT 405
Query: 205 LVTCKKTCNQCGNPGKCSDYNRNCTKWAREGLCKKNFNFMQKNCKFSCDACQDIGDGDNS 384
TC+ N+C K R+C C +M +NC + + C D S
Sbjct: 406 GKTCQLDANEC--EAKPCVNARSCKNLIASYYCDCLPGWMGQNCDININDCLGQCQNDAS 463
Query: 385 NPNCLNSHESCDTWADRGECASNPGYMLVSCKKACNVCGK---------ENKCADYRKRC 537
+ +N + C PGY C++ + C +N+ ++ C
Sbjct: 464 CRDLVNGYR----------CICPPGYAGDHCERDIDECASNPCLNGGHCQNEINRFQCLC 513
Query: 538 PIMAKYGLCESDPRFMLQNCKESCGVCDGSSKNRPCVDANQDCAGWAASHECETNPSWML 717
P LC+ D + N PC + Q C A+ + C+ +
Sbjct: 514 PTGFSGNLCQLDIDYCEPN---------------PCQNGAQ-CYNRASDYFCKCPEDYEG 557
Query: 718 YNCKKSCNHCRDARLESI 771
NC +HCR E I
Sbjct: 558 KNCSHLKDHCRTTTCEVI 575
>sp|Q20191|NAS13_CAEEL Zinc metalloproteinase nas-13 precursor (Nematode astacin 13)
Length = 527
Score = 66.6 bits (161), Expect = 9e-11
Identities = 36/84 (42%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Frame = +1
Query: 511 KCADYRKRCPIMAKYGLCES--DPRFMLQNCKESCGVCDGSSKNRP-CVDANQDCAGWAA 681
KC D RK C +A+ G CES RFM +NC SCG C K + C DA C WA
Sbjct: 444 KCEDRRKDCEFLARAGHCESRFSIRFMTENCANSCGKCIAEEKRKEVCEDARTWCERWAN 503
Query: 682 SHECETN--PSWMLYNCKKSCNHC 747
S C +M C KSCN C
Sbjct: 504 SGMCNQTVFKDYMRQKCAKSCNFC 527
Score = 56.6 bits (135), Expect = 9e-08
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Frame = +1
Query: 247 GKCSDYNRNCTKWAREGLCKKNFN--FMQKNCKFSCDACQDIGDGDNSNPNCLNSHESCD 420
GKC D ++C AR G C+ F+ FM +NC SC C I + + C ++ C+
Sbjct: 443 GKCEDRRKDCEFLARAGHCESRFSIRFMTENCANSCGKC--IAE-EKRKEVCEDARTWCE 499
Query: 421 TWADRGECASN--PGYMLVSCKKACNVC 498
WA+ G C YM C K+CN C
Sbjct: 500 RWANSGMCNQTVFKDYMRQKCAKSCNFC 527
Score = 46.2 bits (108), Expect = 1e-04
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Frame = +1
Query: 1 CEDKPNQYCQEWKKSGYCEKEPNT--MKEYCSKTCGFCESETEDPN-CIDRDRNCQMWSD 171
CED+ C+ ++G+CE + M E C+ +CG C +E + C D C+ W++
Sbjct: 445 CEDRRKD-CEFLARAGHCESRFSIRFMTENCANSCGKCIAEEKRKEVCEDARTWCERWAN 503
Query: 172 RGECG--INPEAMLVTCKKTCNQC 237
G C + + M C K+CN C
Sbjct: 504 SGMCNQTVFKDYMRQKCAKSCNFC 527
Score = 44.3 bits (103), Expect = 5e-04
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Frame = +1
Query: 643 CVDANQDCAGWAASHECETNPS--WMLYNCKKSCNHCRDARLESISDPNCKDLQIHCLYW 816
C D +DC A + CE+ S +M NC SC C E C+D + C W
Sbjct: 445 CEDRRKDCEFLARAGHCESRFSIRFMTENCANSCGKCI---AEEKRKEVCEDARTWCERW 501
Query: 817 ANAGECQ--LNPGWAKQNCPFSC 879
AN+G C + + +Q C SC
Sbjct: 502 ANSGMCNQTVFKDYMRQKCAKSC 524
Score = 42.0 bits (97), Expect = 0.002
Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 8/83 (9%)
Frame = +1
Query: 394 CLNSHESCDTWADRGECASNPG--YMLVSCKKACNVCGKENK----CADYRKRCPIMAKY 555
C + + C+ A G C S +M +C +C C E K C D R C A
Sbjct: 445 CEDRRKDCEFLARAGHCESRFSIRFMTENCANSCGKCIAEEKRKEVCEDARTWCERWANS 504
Query: 556 GLCESD--PRFMLQNCKESCGVC 618
G+C +M Q C +SC C
Sbjct: 505 GMCNQTVFKDYMRQKCAKSCNFC 527
>sp|P78504|JAG1_HUMAN Jagged-1 precursor (Jagged1) (hJ1) (CD339 antigen)
Length = 1218
Score = 65.1 bits (157), Expect = 2e-10
Identities = 60/255 (23%), Positives = 96/255 (37%)
Frame = +1
Query: 103 FCESETEDPNCIDRDRNCQMWSDRGECGINPEAMLVTCKKTCNQCGNPGKCSDYNRNCTK 282
+C+ P C+ N + W C N L C K N CG C +
Sbjct: 261 YCDKCIPHPGCVHGICN-EPWQCL--CETNWGGQL--CDKDLNYCGTHQPCLNGGTCSNT 315
Query: 283 WAREGLCKKNFNFMQKNCKFSCDACQDIGDGDNSNPNCLNSHESCDTWADRGECASNPGY 462
+ C + NC+ + AC S+P ++ SC + EC +PG+
Sbjct: 316 GPDKYQCSCPEGYSGPNCEIAEHACL-------SDP--CHNRGSCKETSLGFECECSPGW 366
Query: 463 MLVSCKKACNVCGKENKCADYRKRCPIMAKYGLCESDPRFMLQNCKESCGVCDGSSKNRP 642
+C + C N + C + C P++ + C+ C+ +P
Sbjct: 367 TGPTCSTNIDDCSPNN--CSHGGTCQDLVNGFKCVCPPQWTGKTCQLDANECEA----KP 420
Query: 643 CVDANQDCAGWAASHECETNPSWMLYNCKKSCNHCRDARLESISDPNCKDLQIHCLYWAN 822
CV+A + C AS+ C+ P WM NC + N C + +D +C+DL N
Sbjct: 421 CVNA-KSCKNLIASYYCDCLPGWMGQNCDININDCLG---QCQNDASCRDL-------VN 469
Query: 823 AGECQLNPGWAKQNC 867
C PG+A +C
Sbjct: 470 GYRCICPPGYAGDHC 484
Score = 47.4 bits (111), Expect = 5e-05
Identities = 54/258 (20%), Positives = 84/258 (32%), Gaps = 9/258 (3%)
Frame = +1
Query: 25 CQEWKKSGYCEKEPNTMKEYCSKTCGFCESETEDPNCIDRDRNCQMWSDRGECGINPEAM 204
C+E CE P CS C PN CQ + +C P+
Sbjct: 351 CKETSLGFECECSPGWTGPTCSTNIDDCS-----PNNCSHGGTCQDLVNGFKCVCPPQWT 405
Query: 205 LVTCKKTCNQCGNPGKCSDYNRNCTKWAREGLCKKNFNFMQKNCKFSCDACQDIGDGDNS 384
TC+ N+C K ++C C +M +NC + + C D S
Sbjct: 406 GKTCQLDANEC--EAKPCVNAKSCKNLIASYYCDCLPGWMGQNCDININDCLGQCQNDAS 463
Query: 385 NPNCLNSHESCDTWADRGECASNPGYMLVSCKKACNVCGK---------ENKCADYRKRC 537
+ +N + C PGY C++ + C +N+ ++ C
Sbjct: 464 CRDLVNGYR----------CICPPGYAGDHCERDIDECASNPCLNGGHCQNEINRFQCLC 513
Query: 538 PIMAKYGLCESDPRFMLQNCKESCGVCDGSSKNRPCVDANQDCAGWAASHECETNPSWML 717
P LC+ D + N PC + Q C A+ + C+ +
Sbjct: 514 PTGFSGNLCQLDIDYCEPN---------------PCQNGAQ-CYNRASDYFCKCPEDYEG 557
Query: 718 YNCKKSCNHCRDARLESI 771
NC +HCR E I
Sbjct: 558 KNCSHLKDHCRTTPCEVI 575
>sp|Q9IAT6|DLLC_BRARE Delta-like protein C precursor (DeltaC protein) (delC)
Length = 664
Score = 61.2 bits (147), Expect = 4e-09
Identities = 80/298 (26%), Positives = 115/298 (38%), Gaps = 9/298 (3%)
Frame = +1
Query: 1 CEDKPNQYCQEWKKSGYCEKEPNTMKEYCSKTCGFCESETEDPNCIDRDRNCQM-WSDR- 174
C+ N+ C K YC EP + CS+ G+CE+ E C C++ W
Sbjct: 181 CDAAGNRICLPGWKGDYCT-EPICLSG-CSEENGYCEAPGE---C-----KCRIGWEGPL 230
Query: 175 -GECGINPEAMLVTCKKTCNQCGNPGKCSDYNRNCTKWAREGLCKKNFNFMQKNCKFSCD 351
EC +P + TCNQ P +C+ C + C ++ NF + D
Sbjct: 231 CDECTRHPGCL----HGTCNQ---PFQCT-----CKEGWGGLFCNEDLNFCTNHKPCRND 278
Query: 352 A-CQDIGDGDNSNPNCLN----SHESCDTWADRGECASNPGYMLVSCKKACNVCGKENKC 516
A C + G G + C+ S ++C+ + EC SNP CK + +EN
Sbjct: 279 ATCTNTGQGSYT---CICKPGFSGKNCEI--ETNECDSNP------CKNGGSCNDQEN-- 325
Query: 517 ADYRKRCPIMAKYGLCESDPRFMLQNCKESCGVC-DGSSKNRPCVDANQDCAGWAASHEC 693
DY CP YG +NC+ S C DG PC + + S+ C
Sbjct: 326 -DYTCTCP-QGFYG----------KNCEVSAMTCADG-----PCFNGGTCMEKGSGSYSC 368
Query: 694 ETNPSWMLYNCKKSCNHCRDARLESISDPNCKDLQIHCLYWANAGECQLNPGWAKQNC 867
P +M NC+K + C SDP Q CL N C+ PG+ C
Sbjct: 369 RCPPGYMGSNCEKKIDRCS-------SDPCANGGQ--CLDLGNKATCRCRPGFTGSRC 417
Score = 37.4 bits (85), Expect = 0.055
Identities = 42/166 (25%), Positives = 50/166 (30%), Gaps = 6/166 (3%)
Frame = +1
Query: 1 CEDKP---NQYCQEWKKSGY-CEKEPNTMKEYCSKTCGFCESE--TEDPNCIDRDRNCQM 162
C D P C E Y C P M C K C S+ C+D
Sbjct: 347 CADGPCFNGGTCMEKGSGSYSCRCPPGYMGSNCEKKIDRCSSDPCANGGQCLDLGNKATC 406
Query: 163 WSDRGECGINPEAMLVTCKKTCNQCGNPGKCSDYNRNCTKWAREGLCKKNFNFMQKNCKF 342
G G E + C N C N G C D T C F K+C+
Sbjct: 407 RCRPGFTGSRCETNIDDCSS--NPCQNAGTCVDGINGYT-------CTCTLGFSGKDCRV 457
Query: 343 SCDACQDIGDGDNSNPNCLNSHESCDTWADRGECASNPGYMLVSCK 480
DAC S C N +C T C G+M C+
Sbjct: 458 RSDAC--------SFMPCQNG-GTCYTHFSGPVCQCPAGFMGTQCE 494
>sp|P34269|TYR1_CAEEL Putative tyrosinase-like protein tyr-1 precursor
Length = 601
Score = 60.1 bits (144), Expect = 8e-09
Identities = 23/81 (28%), Positives = 40/81 (49%)
Frame = +1
Query: 505 ENKCADYRKRCPIMAKYGLCESDPRFMLQNCKESCGVCDGSSKNRPCVDANQDCAGWAAS 684
++ C + C ++ C ++ +M + C++SCG+C + NR C D + CA W
Sbjct: 477 QSNCYNEDPCCNQWSRQNECRTNTVYMNRYCRKSCGLCQSNDNNRGCHDRHISCAYWRGQ 536
Query: 685 HECETNPSWMLYNCKKSCNHC 747
+ C WM NC+ +C C
Sbjct: 537 NFCTRRRQWMAENCQATCGWC 557
Score = 58.2 bits (139), Expect = 3e-08
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +1
Query: 118 TEDPNCIDRDRNCQMWSDRGECGINPEAMLVTCKKTCNQC---GNPGKCSDYNRNCTKWA 288
T NC + D C WS + EC N M C+K+C C N C D + +C W
Sbjct: 475 TPQSNCYNEDPCCNQWSRQNECRTNTVYMNRYCRKSCGLCQSNDNNRGCHDRHISCAYWR 534
Query: 289 REGLCKKNFNFMQKNCKFSCDAC 357
+ C + +M +NC+ +C C
Sbjct: 535 GQNFCTRRRQWMAENCQATCGWC 557
Score = 58.2 bits (139), Expect = 3e-08
Identities = 22/71 (30%), Positives = 31/71 (43%)
Frame = +1
Query: 25 CQEWKKSGYCEKEPNTMKEYCSKTCGFCESETEDPNCIDRDRNCQMWSDRGECGINPEAM 204
C +W + C M YC K+CG C+S + C DR +C W + C + M
Sbjct: 487 CNQWSRQNECRTNTVYMNRYCRKSCGLCQSNDNNRGCHDRHISCAYWRGQNFCTRRRQWM 546
Query: 205 LVTCKKTCNQC 237
C+ TC C
Sbjct: 547 AENCQATCGWC 557
Score = 57.0 bits (136), Expect = 7e-08
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +1
Query: 391 NCLNSHESCDTWADRGECASNPGYMLVSCKKACNVCGKENK---CADYRKRCPIMAKYGL 561
NC N C+ W+ + EC +N YM C+K+C +C + C D C
Sbjct: 479 NCYNEDPCCNQWSRQNECRTNTVYMNRYCRKSCGLCQSNDNNRGCHDRHISCAYWRGQNF 538
Query: 562 CESDPRFMLQNCKESCGVCD 621
C ++M +NC+ +CG C+
Sbjct: 539 CTRRRQWMAENCQATCGWCN 558
Score = 57.0 bits (136), Expect = 7e-08
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 5/112 (4%)
Frame = +1
Query: 253 CSDYNRNCTKWAREGLCKKNFNFMQKNCKFSCDACQDIGDGDNSNPNCLNSHESCDTWAD 432
C + + C +W+R+ C+ N +M + C+ SC CQ +++N C + H SC W
Sbjct: 480 CYNEDPCCNQWSRQNECRTNTVYMNRYCRKSCGLCQ----SNDNNRGCHDRHISCAYWRG 535
Query: 433 RGECASNPGYMLVSCKKACNVCGKEN-----KCADYRKRCPIMAKYGLCESD 573
+ C +M +C+ C C A +R AK+ L E D
Sbjct: 536 QNFCTRRRQWMAENCQATCGWCNMNEAQLCASVARQSRRVRRNAKFWLTEPD 587
Score = 56.2 bits (134), Expect = 1e-07
Identities = 24/79 (30%), Positives = 36/79 (45%)
Frame = +1
Query: 643 CVDANQDCAGWAASHECETNPSWMLYNCKKSCNHCRDARLESISDPNCKDLQIHCLYWAN 822
C + + C W+ +EC TN +M C+KSC C+ + ++ C D I C YW
Sbjct: 480 CYNEDPCCNQWSRQNECRTNTVYMNRYCRKSCGLCQ----SNDNNRGCHDRHISCAYWRG 535
Query: 823 AGECQLNPGWAKQNCPFSC 879
C W +NC +C
Sbjct: 536 QNFCTRRRQWMAENCQATC 554
>sp|Q9QW30|NOTC2_RAT Neurogenic locus notch homolog protein 2 precursor (Notch 2)
[Contains: Notch 2 extracellular truncation; Notch 2
intracellular domain]
Length = 2471
Score = 58.2 bits (139), Expect = 3e-08
Identities = 74/294 (25%), Positives = 107/294 (36%), Gaps = 22/294 (7%)
Frame = +1
Query: 52 CEKEPNTMKEYCSK--TCGFCESETE--DPNCIDRDRNCQMWSDRGECGINPEAMLVTCK 219
C PN + C+ T C+ + DP+ + CQ D C NP M C
Sbjct: 547 CIDHPNGYECQCATGFTGTLCDENIDNCDPDPCHHGQ-CQDGIDSYTCICNPGYMGAICS 605
Query: 220 KTCNQCG-----NPGKCSD----YNRNCTKWAREGLCKKNFNFMQKNCKFSCDACQDIGD 372
++C N G+C D Y NC GL NC+ + D C
Sbjct: 606 DQIDECYSSPCLNDGRCIDLVNGYQCNCQP-GTSGL----------NCEINFDDCA---- 650
Query: 373 GDNSNPNCLNSHESCDTWADRGECASNPGYMLVSC-----KKACNVCGKENKCAD----Y 525
SNP CL H +C +R C +PG+ C + A N C K+ C + +
Sbjct: 651 ---SNP-CL--HGACVDGINRYSCVCSPGFTGQRCNIDIDECASNPCRKDATCINDVNGF 704
Query: 526 RKRCPIMAKYGLCESDPRFMLQNCKESCGVCDGSSKNRPCVDANQDCAGWAASHECETNP 705
R CP + C S + C S PC+ N C G + ++C +
Sbjct: 705 RCMCPEGPHHPSCYSQ----VNECLSS-----------PCIHGN--CTGGLSGYKCLCDA 747
Query: 706 SWMLYNCKKSCNHCRDARLESISDPNCKDLQIHCLYWANAGECQLNPGWAKQNC 867
W+ NC+ N C +S+P C++ C N C G+ NC
Sbjct: 748 GWVGINCEVDKNEC-------LSNP-CQNGGT-CNNLVNGYRCTCKKGFKGYNC 792
Score = 47.0 bits (110), Expect = 7e-05
Identities = 70/296 (23%), Positives = 101/296 (34%), Gaps = 21/296 (7%)
Frame = +1
Query: 43 SGYCEKEPNTMKEYCSKTCGFCESETEDPNCIDRDRNC-----------------QMWSD 171
S C K+ + + C C P+C + C + D
Sbjct: 688 SNPCRKDATCINDVNGFRC-MCPEGPHHPSCYSQVNECLSSPCIHGNCTGGLSGYKCLCD 746
Query: 172 RGECGINPEAMLVTCKKTCNQCGNPGKCSDY--NRNCTKWAREGLCKKNFNFMQKNCKFS 345
G GIN E C N C N G C++ CT CKK F NC+ +
Sbjct: 747 AGWVGINCEVDKNECLS--NPCQNGGTCNNLVNGYRCT-------CKKGFKGY--NCQVN 795
Query: 346 CDACQDIGDGDNSNPNCLNSHESCDTWADRGECASNPGYMLVSCKKACNVCGKENKC--A 519
D C SNP CLN D + C Y +C+ C N C A
Sbjct: 796 IDECA-------SNP-CLNQGTCLDDVSGY-TCHCMLPYTGKNCQTVLAPCSP-NPCENA 845
Query: 520 DYRKRCPIMAKYGLCESDPRFMLQNCKESCGVCDGSSKNRPCVDANQDCAGWAASHECET 699
K P + C P + Q C C ++PC++ N C S+ CE
Sbjct: 846 AVCKEAPNFESF-TCLCAPGWQGQRCTVDVDEC----VSKPCMN-NGICHNTQGSYMCEC 899
Query: 700 NPSWMLYNCKKSCNHCRDARLESISDPNCKDLQIHCLYWANAGECQLNPGWAKQNC 867
P + +C++ N C +++P C++ C+ N C PG+ C
Sbjct: 900 PPGFSGMDCEEDINDC-------LANP-CQN-GGSCVDKVNTFSCLCLPGFVGDKC 946
Score = 46.2 bits (108), Expect = 1e-04
Identities = 73/314 (23%), Positives = 101/314 (32%), Gaps = 25/314 (7%)
Frame = +1
Query: 1 CEDKP---NQYCQEWKKSGYCEKEPNTMKEYCSKTCGFCESET--EDPNCIDRDRNCQMW 165
C KP N C + S CE P C + C + +C+D+
Sbjct: 877 CVSKPCMNNGICHNTQGSYMCECPPGFSGMDCEEDINDCLANPCQNGGSCVDKVNTFSCL 936
Query: 166 SDRGECGINPEAMLVTCKKTCNQCGNPGKCSDYNRNCTKWAREGL----CKKNFNFMQKN 333
G G + + C C N G CSDY + T G C+ N + ++
Sbjct: 937 CLPGFVGDKCQTDMNECLS--EPCKNGGTCSDYVNSYTCTCPAGFHGVHCENNIDECTES 994
Query: 334 CKFSCDACQDIGDGDNS----------NPNCLNSHESCDTWADRGECASNPGYMLVSCKK 483
F+ C DG NS P CL+ D EC+SNP
Sbjct: 995 SCFNGGTCV---DGINSFSCLCPVGFTGPFCLH---------DINECSSNP--------- 1033
Query: 484 ACNVCGKENKCAD----YRKRCPIMAKYGLCESDPRFMLQNCKESCGVCDGSSKNRPCVD 651
C C D YR CP+ + +NC+ +C S PC +
Sbjct: 1034 ----CLNSGTCVDGLGTYRCTCPL-----------GYTGKNCQTLVNLCSPS----PCKN 1074
Query: 652 ANQDCAGWAASHECETNPSWMLYNCKKSCNHCRDARLES--ISDPNCKDLQIHCLYWANA 825
CA A C P W C C+ A L+ + C+ I C+ N
Sbjct: 1075 KG-TCAQEKARPRCLCPPGWDGAYCDVLNVSCKAAALQKGVPVEHLCQHSGI-CINAGNT 1132
Query: 826 GECQLNPGWAKQNC 867
CQ G+ C
Sbjct: 1133 HHCQCPLGYTGSYC 1146
Score = 45.1 bits (105), Expect = 3e-04
Identities = 74/318 (23%), Positives = 98/318 (30%), Gaps = 29/318 (9%)
Frame = +1
Query: 1 CEDKPNQY---CQEWKKSGYCEKEPNTMKEYCSKTCGFCESETEDPNCIDRDRNCQMWSD 171
C DK + C K +CE E N E S C + C+D+ Q
Sbjct: 471 CLDKIGGFTCLCMPGFKGVHCELEVN---ECQSNPC------VNNGQCVDKVNRFQCLCP 521
Query: 172 RGECGINPEAMLVTCKKTCNQCGNPGKCSD----YNRNCTKWAREGLCKKNFNFMQKNCK 339
G G + + C T C N KC D Y C LC +N
Sbjct: 522 PGFTGPVCQIDIDDCSST--PCLNGAKCIDHPNGYECQCATGFTGTLCDENI-------- 571
Query: 340 FSCDACQDIGDGDNSNPNCLNSHESCDTWADRGECASNPGYMLVSCKKACNVCGKENKCA 519
DN +P+ + H C D C NPGYM C + C
Sbjct: 572 ------------DNCDPDPCH-HGQCQDGIDSYTCICNPGYMGAICSDQIDECYSSPCLN 618
Query: 520 DYRKRCPIMAKYGLCESDPRFMLQNCKESCGVC-DGSSKNRPCVDA--NQDCA---GWAA 681
D RC + C P NC+ + C + CVD C G+
Sbjct: 619 D--GRCIDLVNGYQCNCQPGTSGLNCEINFDDCASNPCLHGACVDGINRYSCVCSPGFTG 676
Query: 682 SH------ECETNPSWMLYNCKKSCNHCRDARLESISDPNC-----KDLQIHCLYWANAG 828
EC +NP C N R E P+C + L C++ G
Sbjct: 677 QRCNIDIDECASNPCRKDATCINDVNGFRCMCPEGPHHPSCYSQVNECLSSPCIHGNCTG 736
Query: 829 -----ECQLNPGWAKQNC 867
+C + GW NC
Sbjct: 737 GLSGYKCLCDAGWVGINC 754
Score = 37.4 bits (85), Expect = 0.055
Identities = 40/175 (22%), Positives = 61/175 (34%), Gaps = 12/175 (6%)
Frame = +1
Query: 214 CKKTCNQCGNPGKCSDYNRNCTKWAREGLCKKNFNFMQKNCKFSCDACQDIGDGDNSNPN 393
C N+C PG+C + C C+ F ++C C +
Sbjct: 179 CDADINECDIPGRC-QHGGTCLNLPGSYRCQCPQRFTGQHCDSPYVPC--------APSP 229
Query: 394 CLNSHESCDTWADRGECASNPGYMLVSCKKACNVCGKENKCAD----------YRKRCPI 543
C+N T EC PG+ +C++ + C +KC + Y RCP
Sbjct: 230 CVNGGTCRQTGDFTSECHCLPGFEGSNCERNIDDC-PNHKCQNGGVCVDGVNTYNCRCPP 288
Query: 544 MAKYGLCESD-PRFMLQ-NCKESCGVCDGSSKNRPCVDANQDCAGWAASHECETN 702
C D +LQ N ++ G C + CV N GW+ +C N
Sbjct: 289 QWTGQFCTEDVDECLLQPNACQNGGTCTNRNGGYGCVCVN----GWSGD-DCSEN 338
Score = 33.5 bits (75), Expect = 0.80
Identities = 65/311 (20%), Positives = 98/311 (31%), Gaps = 24/311 (7%)
Frame = +1
Query: 16 NQYCQEWKKSGYCEKEPNTMKEYCSK-TCGF-CESETED----PNCIDRDRNCQMWSDRG 177
NQ CQ G C N K C T G CE +D P+C++ + C
Sbjct: 1193 NQPCQN---GGTCIDLVNHFKCSCPPGTRGLLCEENIDDCAGAPHCLNGGQ-CVDRIGGY 1248
Query: 178 ECGINPEAMLVTCKKTCNQCGNPGKCSDYNRNCTKWAREGLCKKNFNFMQKNCKFSCDAC 357
C P C+ N+C + S+ + +C + C F ++C+ D C
Sbjct: 1249 SCRCLPGFAGERCEGDINECLSNPCSSEGSLDCIQLKNNYQCVCRSAFTGRHCETFLDVC 1308
Query: 358 QDIGDGDNSNPNCLNSHES--CDTWADRGECASNPGYMLVSCKKACN--VCGKENKCADY 525
CLN D C PG+ C+ +C C + +C
Sbjct: 1309 --------PQKPCLNGGTCAVASNVPDGFICRCPPGFSGARCQSSCGQVKCRRGEQCVH- 1359
Query: 526 RKRCPIMAKYGLCESDPRFMLQNCKESCGVCDGSSKNRPCVDANQDC--AGWAASHECET 699
S P N K+ C+ + PC C + C
Sbjct: 1360 ------------TASGPHCFCPNHKD----CESGCASNPCQHGG-TCYPQRQPPYYSCRC 1402
Query: 700 NPSWMLYNCKK----------SC--NHCRDARLESISDPNCKDLQIHCLYWANAGECQLN 843
+P + +C+ +C +C D + I D C H W + G+C L
Sbjct: 1403 SPPFWGSHCESYTAPTSTPPATCLSQYCADKARDGICDEACNS---HACQW-DGGDCSLT 1458
Query: 844 PGWAKQNCPFS 876
NC S
Sbjct: 1459 MEDPWANCTSS 1469
>sp|Q14162|SREC_HUMAN Endothelial cells scavenger receptor precursor (Acetyl LDL
receptor) (Scavenger receptor class F member 1)
Length = 830
Score = 57.8 bits (138), Expect = 4e-08
Identities = 71/315 (22%), Positives = 92/315 (29%), Gaps = 35/315 (11%)
Frame = +1
Query: 40 KSGYCEKEPNTMKEYCSKTC------------------GFCESETEDPNCIDRDRNCQMW 165
K G C +P +CS C G CE T C W
Sbjct: 71 KPGLCRCKPGFFGAHCSSRCPGQYWGPDCRESCPCHPHGQCEPATGACQC-----QADRW 125
Query: 166 SDRGE--CGINPEAMLVTCKKTCN--------QCGNPGKCSDYNRNCTKWAREGLCKKNF 315
R E C P C+ C P +C+ C + +CK +
Sbjct: 126 GARCEFPCACGPHGRCDPATGVCHCEPGWWSSTCRRPCQCNTAAARCEQATGACVCKPGW 185
Query: 316 NFMQKNCKFSCDACQDIGDGDNSNPNCLNSHESCDTWADRGECASNPGYMLVSCKKACNV 495
+ C F C NC S C+ D G CA PG+ C++ C
Sbjct: 186 --WGRRCSFRC--------------NCHGS--PCEQ--DSGRCACRPGWWGPECQQQCEC 225
Query: 496 CGKENKCADYRKRCPIMAKYGLCE--SDPRFMLQNCKESCGVCDGSSKNRPCVDANQDCA 669
A CP + CE C SCG C N PC C
Sbjct: 226 VRGRCSAASGECTCPPGFRGARCELPCPAGSHGVQCAHSCGRC---KHNEPCSPDTGSC- 281
Query: 670 GWAASHECETNPSWMLYNCKKSCNHCRDARLESISDPNCKDLQIHCLYW----ANAGECQ 837
CE P W C++ C L +C+ HC + + G CQ
Sbjct: 282 -----ESCE--PGWNGTQCQQPC-------LPGTFGESCEQQCPHCRHGEACEPDTGHCQ 327
Query: 838 -LNPGWAKQNCPFSC 879
+PGW C C
Sbjct: 328 RCDPGWLGPRCEDPC 342
Score = 37.4 bits (85), Expect = 0.055
Identities = 35/162 (21%), Positives = 58/162 (35%), Gaps = 2/162 (1%)
Frame = +1
Query: 85 CSKTCGFCESETEDPNCIDRDRNCQMWSDRGECG--INPEAMLVTCKKTCNQCGNPGKCS 258
C+ +CG C+ +C+ + +C P +C++ C C + C
Sbjct: 261 CAHSCGRCKHNEPCSPDTGSCESCEPGWNGTQCQQPCLPGTFGESCEQQCPHCRHGEACE 320
Query: 259 DYNRNCTKWAREGLCKKNFNFMQKNCKFSCDACQDIGDGDNSNPNCLNSHESCDTWADRG 438
+C + C + + C+ C D ++ P C+ SCDT G
Sbjct: 321 PDTGHCQR------CDPGW--LGPRCEDPCPTGTFGEDCGSTCPTCVQG--SCDTVT--G 368
Query: 439 ECASNPGYMLVSCKKACNVCGKENKCADYRKRCPIMAKYGLC 564
+C + GY SC +C N C+ P GLC
Sbjct: 369 DCVCSAGYWGPSCNASCPAGFHGNNCS-----VPCECPEGLC 405
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,338,506
Number of Sequences: 369166
Number of extensions: 2754541
Number of successful extensions: 9300
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8781
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8742211660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)