Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_006_H09
(922 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) ... 297 2e-80
sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathe... 295 9e-80
sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted ... 293 6e-79
sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathe... 288 2e-77
sp|Q26636|CATL_SARPE Cathepsin L precursor [Contains: Cathe... 286 7e-77
sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Catheps... 285 1e-76
sp|Q24940|CATLP_FASHE Cathepsin L-like proteinase precursor 285 2e-76
sp|P43235|CATK_HUMAN Cathepsin K precursor (Cathepsin O) (C... 280 3e-75
sp|P61277|CATK_MACMU Cathepsin K precursor >gi|47117667|sp|... 280 3e-75
sp|Q9GLE3|CATK_PIG Cathepsin K precursor 280 3e-75
>sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) (Cathepsin U)
Length = 334
Score = 297 bits (761), Expect = 2e-80
Identities = 152/310 (49%), Positives = 194/310 (62%), Gaps = 5/310 (1%)
Frame = +1
Query: 7 LILSLVVVAITAVPQKFSVNSELNEEWETYKTTFGRKYDELTDITRRLIWEQNLKYIQKH 186
L+L+ + I + KF N L+ +W +K T R Y + RR +WE+N+K I+ H
Sbjct: 5 LVLAAFCLGIASAVPKFDQN--LDTKWYQWKATHRRLYGANEEGWRRAVWEKNMKMIELH 62
Query: 187 NLEYDLGKHTYSLGLNQFADMTNEEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDW 366
N EY GKH +++ +N F DMTNEEF+ + +G + + +G + P + LP SVDW
Sbjct: 63 NGEYSQGKHGFTMAMNAFGDMTNEEFR-QMMGCFRNQKFRKGKVFREPLFLD-LPKSVDW 120
Query: 367 RQKGYVTPVKNQQQCGSCWSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXX 546
R+KGYVTPVKNQ+QCGSCW+FSATG+LEGQ FRK +L+S SEQ LVDCS
Sbjct: 121 RKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNG 180
Query: 547 XLMDNAFRYIKDQ-GIESEGDYPYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAV 723
M AF+Y+K+ G++SE YPY A D CK P V TGFT + E L AV
Sbjct: 181 GFMARAFQYVKENGGLDSEESYPYVAVDEICKYRPENSVANDTGFTVVAPGKEKALMKAV 240
Query: 724 ATVGPVSVAIDAGHASFQLYKSGIYNEESCSTTQLDHGVLAVGYG----TQIGKKYWIVK 891
ATVGP+SVA+DAGH+SFQ YKSGIY E CS+ LDHGVL VGYG KYW+VK
Sbjct: 241 ATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEGANSNNSKYWLVK 300
Query: 892 NSWDVTWGES 921
NSW WG +
Sbjct: 301 NSWGPEWGSN 310
>sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 333
Score = 295 bits (756), Expect = 9e-80
Identities = 156/308 (50%), Positives = 190/308 (61%), Gaps = 5/308 (1%)
Frame = +1
Query: 7 LILSLVVVAITAVPQKFSVNSELNEEWETYKTTFGRKYDELTDITRRLIWEQNLKYIQKH 186
L L+ + + I + KF + LN +W +K T R Y + RR +WE+N+K I+ H
Sbjct: 5 LFLTALCLGIASAAPKF--DQSLNAQWYQWKATHRRLYGMNEEGWRRAVWEKNMKMIELH 62
Query: 187 NLEYDLGKHTYSLGLNQFADMTNEEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDW 366
N EY GKH +++ +N F DMTNEEF+ G K +G + P +P SVDW
Sbjct: 63 NREYSQGKHGFTMAMNAFGDMTNEEFRQVMNGFQNQKHK-KGKMFQEPL-FAEIPKSVDW 120
Query: 367 RQKGYVTPVKNQQQCGSCWSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXX 546
R+KGYVTPVKNQ QCGSCW+FSATG+LEGQ FRK +L+S SEQ LVDCS
Sbjct: 121 REKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNEGCNG 180
Query: 547 XLMDNAFRYIKDQ-GIESEGDYPYTATD-GTCKRNPSKIVTKCTGFTDIQSQNETDLANA 720
LMDNAFRY+KD G++SE YPY D TC P TGF D+ Q E L A
Sbjct: 181 GLMDNAFRYVKDNGGLDSEESYPYLGRDTETCNYKPECSAANDTGFVDL-PQREKALMKA 239
Query: 721 VATVGPVSVAIDAGHASFQLYKSGIYNEESCSTTQLDHGVLAVGY---GTQIGKKYWIVK 891
VAT+GP+SVAIDAGH SFQ YKSGIY + CS+ LDHGVL VGY GT K+WIVK
Sbjct: 240 VATLGPISVAIDAGHQSFQFYKSGIYFDPDCSSKDLDHGVLVVGYGFEGTDSNNKFWIVK 299
Query: 892 NSWDVTWG 915
NSW WG
Sbjct: 300 NSWGPEWG 307
>sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted protein) (MEP) [Contains:
Cathepsin L heavy chain; Cathepsin L light chain]
Length = 333
Score = 293 bits (749), Expect = 6e-79
Identities = 155/308 (50%), Positives = 190/308 (61%), Gaps = 5/308 (1%)
Frame = +1
Query: 7 LILSLVVVAITAVPQKFSVNSELNEEWETYKTTFGRKYDELTDITRRLIWEQNLKYIQKH 186
LIL+ + I + F + L +W +K R Y + RR +WE+N+K I+ H
Sbjct: 5 LILAAFCLGIASATLTF--DHSLEAQWTKWKAMHNRLYGMNEEGWRRAVWEKNMKMIELH 62
Query: 187 NLEYDLGKHTYSLGLNQFADMTNEEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDW 366
N EY GKH++++ +N F DMT+EEF+ G KP +G + P P SVDW
Sbjct: 63 NQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPR-KGKVFQEPLFYEA-PRSVDW 120
Query: 367 RQKGYVTPVKNQQQCGSCWSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXX 546
R+KGYVTPVKNQ QCGSCW+FSATG+LEGQ FRK RLIS SEQ LVDCS
Sbjct: 121 REKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNG 180
Query: 547 XLMDNAFRYIKDQ-GIESEGDYPYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAV 723
LMD AF+Y++D G++SE YPY AT+ +CK NP V TGF DI Q E L AV
Sbjct: 181 GLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPKQ-EKALMKAV 239
Query: 724 ATVGPVSVAIDAGHASFQLYKSGIYNEESCSTTQLDHGVLAVGYGTQI----GKKYWIVK 891
ATVGP+SVAIDAGH SF YK GIY E CS+ +DHGVL VGYG + KYW+VK
Sbjct: 240 ATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVK 299
Query: 892 NSWDVTWG 915
NSW WG
Sbjct: 300 NSWGEEWG 307
>sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 288 bits (736), Expect = 2e-77
Identities = 155/307 (50%), Positives = 186/307 (60%), Gaps = 6/307 (1%)
Frame = +1
Query: 13 LSLVVVAITAVPQKFSVNSELNEEWETYKTTFGRKYDELTDITRRLIWEQNLKYIQKHNL 192
L+++ + + + K N L+ W +K T R Y + RR +WE+N K I HN
Sbjct: 7 LTVLCLGVASAAPKLDPN--LDAHWHQWKATHRRLYGMNEEEWRRAVWEKNKKIIDLHNQ 64
Query: 193 EYDLGKHTYSLGLNQFADMTNEEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQ 372
EY GKH + + +N F DMTNEEF+ G K +G + P + V P SVDW +
Sbjct: 65 EYSEGKHAFRMAMNAFGDMTNEEFRQVMNGFQNQKHK-KGKLFHEPLLVDV-PKSVDWTK 122
Query: 373 KGYVTPVKNQQQCGSCWSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXL 552
KGYVTPVKNQ QCGSCW+FSATG+LEGQ FRK +L+S SEQ LVDCS L
Sbjct: 123 KGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGL 182
Query: 553 MDNAFRYIKDQ-GIESEGDYPYTATD-GTCKRNPSKIVTKCTGFTDIQSQNETDLANAVA 726
MDNAF+YIKD G++SE YPY ATD +C P TGF DI Q E L AVA
Sbjct: 183 MDNAFQYIKDNGGLDSEESYPYLATDTNSCNYKPECSAANDTGFVDI-PQREKALMKAVA 241
Query: 727 TVGPVSVAIDAGHASFQLYKSGIYNEESCSTTQLDHGVLAVGYGTQ----IGKKYWIVKN 894
TVGP+SVAIDAGH SFQ YKSGIY + CS LDHGVL VGYG + K+WIVKN
Sbjct: 242 TVGPISVAIDAGHTSFQFYKSGIYYDPDCSCKDLDHGVLVVGYGFEGTDSNNNKFWIVKN 301
Query: 895 SWDVTWG 915
SW WG
Sbjct: 302 SWGPEWG 308
>sp|Q26636|CATL_SARPE Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 339
Score = 286 bits (731), Expect = 7e-77
Identities = 152/310 (49%), Positives = 193/310 (62%), Gaps = 10/310 (3%)
Frame = +1
Query: 19 LVVVAITAVPQKFSVNSELNEEWETYKTTFGRKY-DELTDITRRLIWEQNLKYIQKHNLE 195
+ ++A+ A+ Q S + EEW TYK + Y +E+ + R I+ +N I KHN
Sbjct: 6 VALLALVALTQAISPLDLIKEEWHTYKLQHRKNYANEVEERFRMKIFNENRHKIAKHNQL 65
Query: 196 YDLGKHTYSLGLNQFADMTNEEFKAKYLG-------IMKTKPTLEGSTYMAPENIGVLPA 354
+ GK +Y LGLN++ADM + EFK G +M+ + L G+TY+ P ++ V P
Sbjct: 66 FAQGKVSYKLGLNKYADMLHHEFKETMNGYNHTLRQLMRERTGLVGATYIPPAHVTV-PK 124
Query: 355 SVDWRQKGYVTPVKNQQQCGSCWSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXX 534
SVDWR+ G VT VK+Q CGSCW+FS+TG+LEGQ+FRK L+S SEQ LVDCS
Sbjct: 125 SVDWREHGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYGNN 184
Query: 535 XXXXXLMDNAFRYIKDQG-IESEGDYPYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDL 711
LMDNAFRYIKD G I++E YPY D +C N + I TGF DI +E +
Sbjct: 185 GCNGGLMDNAFRYIKDNGGIDTEKSYPYEGIDDSCHFNKATIGATDTGFVDIPEGDEEKM 244
Query: 712 ANAVATVGPVSVAIDAGHASFQLYKSGIYNEESCSTTQLDHGVLAVGYGT-QIGKKYWIV 888
AVAT+GPVSVAIDA H SFQLY G+YNE C LDHGVL VGYGT + G YW+V
Sbjct: 245 KKAVATMGPVSVAIDASHESFQLYSEGVYNEPECDEQNLDHGVLVVGYGTDESGMDYWLV 304
Query: 889 KNSWDVTWGE 918
KNSW TWGE
Sbjct: 305 KNSWGTTWGE 314
>sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 285 bits (730), Expect = 1e-76
Identities = 153/309 (49%), Positives = 190/309 (61%), Gaps = 6/309 (1%)
Frame = +1
Query: 7 LILSLVVVAITAVPQKFSVNSELNEEWETYKTTFGRKYDELTDITRRLIWEQNLKYIQKH 186
L L+ + + I + K N L+ +W +K T GR Y + RR +WE+N+K I+ H
Sbjct: 5 LFLTALCLGIASAAPKLDQN--LDADWYKWKATHGRLYGMNEEGWRRAVWEKNMKMIELH 62
Query: 187 NLEYDLGKHTYSLGLNQFADMTNEEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDW 366
N EY GKH +S+ +N F DMTNEEF+ G K +G + + V P SVDW
Sbjct: 63 NQEYSQGKHGFSMAMNAFGDMTNEEFRQVMNGFQNQKHK-KGKVFHESLVLEV-PKSVDW 120
Query: 367 RQKGYVTPVKNQQQCGSCWSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXX 546
R+KGYVT VKNQ QCGSCW+FSATG+LEGQ FRK +L+S SEQ LVDCS
Sbjct: 121 REKGYVTAVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNG 180
Query: 547 XLMDNAFRYIKDQ-GIESEGDYPYTATD-GTCKRNPSKIVTKCTGFTDIQSQNETDLANA 720
LMDNAF+Y+KD G+++E YPY + +C P TGF DI Q E L A
Sbjct: 181 GLMDNAFQYVKDNGGLDTEESYPYLGRETNSCTYKPECSAANDTGFVDI-PQREKALMKA 239
Query: 721 VATVGPVSVAIDAGHASFQLYKSGIYNEESCSTTQLDHGVLAVGYGTQ----IGKKYWIV 888
VATVGP+SVAIDAGH+SFQ YKSGIY + CS+ LDHGVL VGYG + K+WIV
Sbjct: 240 VATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTDSNSSKFWIV 299
Query: 889 KNSWDVTWG 915
KNSW WG
Sbjct: 300 KNSWGPEWG 308
>sp|Q24940|CATLP_FASHE Cathepsin L-like proteinase precursor
Length = 326
Score = 285 bits (728), Expect = 2e-76
Identities = 140/302 (46%), Positives = 188/302 (62%)
Frame = +1
Query: 13 LSLVVVAITAVPQKFSVNSELNEEWETYKTTFGRKYDELTDITRRLIWEQNLKYIQKHNL 192
+ L ++A+ V V ++ W +K + ++Y+ D RR IWE+N+K+IQ+HNL
Sbjct: 1 MRLFILAVLTV----GVLGSNDDLWHQWKRMYNKEYNGADDQHRRNIWEKNVKHIQEHNL 56
Query: 193 EYDLGKHTYSLGLNQFADMTNEEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQ 372
+DLG TY+LGLNQF DMT EEFKAKYL M + N +P +DWR+
Sbjct: 57 RHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDILSHGVPYEANNRAVPDKIDWRE 116
Query: 373 KGYVTPVKNQQQCGSCWSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXL 552
GYVT VK+Q CGSCW+FS TG++EGQY + ISFSEQQLVDCS L
Sbjct: 117 SGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNNGCSGGL 176
Query: 553 MDNAFRYIKDQGIESEGDYPYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATV 732
M+NA++Y+K G+E+E YPYTA +G C+ N V K TG+ + S +E +L N V
Sbjct: 177 MENAYQYLKQFGLETESSYPYTAVEGQCRYNKQLGVAKVTGYYTVHSGSEVELKNLVGAR 236
Query: 733 GPVSVAIDAGHASFQLYKSGIYNEESCSTTQLDHGVLAVGYGTQIGKKYWIVKNSWDVTW 912
P +VA+D + F +Y+SGIY ++CS +++H VLAVGYGTQ G YWIVKNSW W
Sbjct: 237 RPAAVAVDV-ESDFMMYRSGIYQSQTCSPLRVNHAVLAVGYGTQGGTDYWIVKNSWGTYW 295
Query: 913 GE 918
GE
Sbjct: 296 GE 297
>sp|P43235|CATK_HUMAN Cathepsin K precursor (Cathepsin O) (Cathepsin X) (Cathepsin O2)
Length = 329
Score = 280 bits (717), Expect = 3e-75
Identities = 147/305 (48%), Positives = 189/305 (61%), Gaps = 3/305 (0%)
Frame = +1
Query: 10 ILSLVVVAITAVPQKFSVNSELNEEWETYKTTFGRKYDELTD-ITRRLIWEQNLKYIQKH 186
+L L VV+ P++ L+ WE +K T ++Y+ D I+RRLIWE+NLKYI H
Sbjct: 6 VLLLPVVSFALYPEEI-----LDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIH 60
Query: 187 NLEYDLGKHTYSLGLNQFADMTNEEFKAKYLGI-MKTKPTLEGSTYMAPENIGVLPASVD 363
NLE LG HTY L +N DMT+EE K G+ + + T PE G P SVD
Sbjct: 61 NLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLSHSRSNDTLYIPEWEGRAPDSVD 120
Query: 364 WRQKGYVTPVKNQQQCGSCWSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXX 543
+R+KGYVTPVKNQ QCGSCW+FS+ G+LEGQ +K +L++ S Q LVDC
Sbjct: 121 YRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCG 178
Query: 544 XXLMDNAFRYI-KDQGIESEGDYPYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANA 720
M NAF+Y+ K++GI+SE YPY + +C NP+ KC G+ +I NE L A
Sbjct: 179 GGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRA 238
Query: 721 VATVGPVSVAIDAGHASFQLYKSGIYNEESCSTTQLDHGVLAVGYGTQIGKKYWIVKNSW 900
VA VGPVSVAIDA SFQ Y G+Y +ESC++ L+H VLAVGYG Q G K+WI+KNSW
Sbjct: 239 VARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSW 298
Query: 901 DVTWG 915
WG
Sbjct: 299 GENWG 303
>sp|P61277|CATK_MACMU Cathepsin K precursor
sp|P61276|CATK_MACFA Cathepsin K precursor
Length = 329
Score = 280 bits (717), Expect = 3e-75
Identities = 146/305 (47%), Positives = 189/305 (61%), Gaps = 3/305 (0%)
Frame = +1
Query: 10 ILSLVVVAITAVPQKFSVNSELNEEWETYKTTFGRKYDELTD-ITRRLIWEQNLKYIQKH 186
+L L V++ P++ L+ WE +K T ++Y+ D I+RRLIWE+NLKYI H
Sbjct: 6 VLLLPVMSFALYPEEI-----LDTHWELWKKTHRKQYNSKVDEISRRLIWEKNLKYISIH 60
Query: 187 NLEYDLGKHTYSLGLNQFADMTNEEFKAKYLGI-MKTKPTLEGSTYMAPENIGVLPASVD 363
NLE LG HTY L +N DMTNEE K G+ + + T P+ G P SVD
Sbjct: 61 NLEASLGVHTYELAMNHLGDMTNEEVVQKMTGLKVPASHSRSNDTLYIPDWEGRAPDSVD 120
Query: 364 WRQKGYVTPVKNQQQCGSCWSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXX 543
+R+KGYVTPVKNQ QCGSCW+FS+ G+LEGQ +K +L++ S Q LVDC
Sbjct: 121 YRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCG 178
Query: 544 XXLMDNAFRYI-KDQGIESEGDYPYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANA 720
M NAF+Y+ K++GI+SE YPY + +C NP+ KC G+ +I NE L A
Sbjct: 179 GGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRA 238
Query: 721 VATVGPVSVAIDAGHASFQLYKSGIYNEESCSTTQLDHGVLAVGYGTQIGKKYWIVKNSW 900
VA VGPVSVAIDA SFQ Y G+Y +ESC++ L+H VLAVGYG Q G K+WI+KNSW
Sbjct: 239 VARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSW 298
Query: 901 DVTWG 915
WG
Sbjct: 299 GENWG 303
>sp|Q9GLE3|CATK_PIG Cathepsin K precursor
Length = 330
Score = 280 bits (717), Expect = 3e-75
Identities = 147/307 (47%), Positives = 194/307 (63%), Gaps = 4/307 (1%)
Frame = +1
Query: 7 LILSLVVVAITAVPQKFSVNSELNEEWETYKTTFGRKYDELTD-ITRRLIWEQNLKYIQK 183
++L L V++ P++ L+ +WE +K T+ ++Y+ D I+RRLIWE+NLK+I
Sbjct: 6 VVLLLPVMSSALYPEEI-----LDTQWELWKKTYRKQYNSKVDEISRRLIWEKNLKHISI 60
Query: 184 HNLEYDLGKHTYSLGLNQFADMTNEEFKAKYLGIMKTKPTLEGS--TYMAPENIGVLPAS 357
HNLE LG HTY L +N DMT+EE K G+ K P+ S T P+ G P S
Sbjct: 61 HNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGL-KVPPSHSRSNDTLYIPDWEGRTPDS 119
Query: 358 VDWRQKGYVTPVKNQQQCGSCWSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXX 537
+D+R+KGYVTPVKNQ QCGSCW+FS+ G+LEGQ +K +L++ S Q LVDC
Sbjct: 120 IDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC--VSENDG 177
Query: 538 XXXXLMDNAFRYI-KDQGIESEGDYPYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLA 714
M NAF+Y+ K++GI+SE YPY D C NP+ KC G+ +I NE L
Sbjct: 178 CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDENCMYNPTGKAAKCRGYREIPEGNEKALK 237
Query: 715 NAVATVGPVSVAIDAGHASFQLYKSGIYNEESCSTTQLDHGVLAVGYGTQIGKKYWIVKN 894
AVA VGPVSVAIDA SFQ Y G+Y +E+C++ L+H VLAVGYG Q GKK+WI+KN
Sbjct: 238 RAVARVGPVSVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQKGKKHWIIKN 297
Query: 895 SWDVTWG 915
SW WG
Sbjct: 298 SWGENWG 304
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.315 0.132 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,845,766
Number of Sequences: 369166
Number of extensions: 2009429
Number of successful extensions: 6241
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5700
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9414689480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)