Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_006_G23
(815 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P27797|CRTC_HUMAN Calreticulin precursor (CRP55) (Calreg... 380 e-105
sp|P52193|CRTC1_BOVIN Calreticulin, brain isoform 1 precurs... 380 e-105
sp|P42918|CRTC2_BOVIN Calreticulin, brain isoform 2 precurs... 379 e-105
sp|P14211|CRTC_MOUSE Calreticulin precursor (CRP55) (Calreg... 376 e-104
sp|Q8K3H7|CRTC_CRIGR Calreticulin precursor (CRP55) (Calreg... 375 e-104
sp|P18418|CRTC_RAT Calreticulin precursor (CRP55) (Calregul... 375 e-103
sp|P15253|CRTC_RABIT Calreticulin precursor (CRP55) (Calreg... 374 e-103
sp|P29413|CRTC_DROME Calreticulin precursor (CRP55) (Calreg... 374 e-103
sp|P11012|RAL1_ONCVO RAL-1 protein precursor (RAL1 antigen)... 367 e-101
sp|Q06814|CRTC_SCHMA Calreticulin precursor (SM4 protein) 346 4e-95
>sp|P27797|CRTC_HUMAN Calreticulin precursor (CRP55) (Calregulin) (HACBP) (ERp60) (grp60)
Length = 417
Score = 380 bits (975), Expect = e-105
Identities = 172/257 (66%), Positives = 201/257 (78%)
Frame = +2
Query: 41 LMSSDIDQTKFHGETPYHIMFGPDICGLSTKKVHVIFNYKGQNHLIKKEIRCKDDEFSHV 220
L + +DQT HG++ Y+IMFGPDICG TKKVHVIFNYKG+N LI K+IRCKDDEF+H+
Sbjct: 112 LFPNSLDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHL 171
Query: 221 YTLIVSPDNTYEVLIDNEKVESGNLEDDWDFLAPKKIKDPNAKKPEDWEDNEKIDDSTDK 400
YTLIV PDNTYEV IDN +VESG+LEDDWDFL PKKIKDP+A KPEDW++ KIDD TD
Sbjct: 172 YTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDASKPEDWDERAKIDDPTDS 231
Query: 401 KPEDWDKPKTIADPKAKKPXXXXXXXXXXXXAPQIDNPEYKGEWKPKQIDNPKYKGPWIH 580
KPEDWDKP+ I DP AKKP P I NPEYKGEWKP+QIDNP YKG WIH
Sbjct: 232 KPEDWDKPEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIH 291
Query: 581 PEIDNPDYKPESNLYLYKNIGSIGFDLWQVKSGTIFDNILLTDDPAYAKKYVEKTWKETA 760
PEIDNP+Y P+ ++Y Y N G +G DLWQVKSGTIFDN L+T+D AYA+++ +TW T
Sbjct: 292 PEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTK 351
Query: 761 AGEKKMKDKQDEIERKK 811
A EK+MKDKQDE +R K
Sbjct: 352 AAEKQMKDKQDEEQRLK 368
Score = 30.0 bits (66), Expect = 7.9
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +1
Query: 1 HEQTIDCGGGYV 36
HEQ IDCGGGYV
Sbjct: 99 HEQNIDCGGGYV 110
>sp|P52193|CRTC1_BOVIN Calreticulin, brain isoform 1 precursor (CRP55) (Calregulin)
(HACBP)
Length = 417
Score = 380 bits (975), Expect = e-105
Identities = 172/255 (67%), Positives = 202/255 (79%)
Frame = +2
Query: 41 LMSSDIDQTKFHGETPYHIMFGPDICGLSTKKVHVIFNYKGQNHLIKKEIRCKDDEFSHV 220
L + +DQT HG++ Y+IMFGPDICG TKKVHVIFNYKG+N LI K+IRCKDDEF+H+
Sbjct: 112 LFPAGLDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHL 171
Query: 221 YTLIVSPDNTYEVLIDNEKVESGNLEDDWDFLAPKKIKDPNAKKPEDWEDNEKIDDSTDK 400
YTLIV P+NTYEV IDN +VESG+LEDDWDFL PKKIKDP+A KPEDW+D KIDD TD
Sbjct: 172 YTLIVRPNNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDAAKPEDWDDRAKIDDPTDS 231
Query: 401 KPEDWDKPKTIADPKAKKPXXXXXXXXXXXXAPQIDNPEYKGEWKPKQIDNPKYKGPWIH 580
KPEDWDKP+ I DP AKKP P I NPEYKGEWKP+QIDNP+YKG WIH
Sbjct: 232 KPEDWDKPEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPEYKGIWIH 291
Query: 581 PEIDNPDYKPESNLYLYKNIGSIGFDLWQVKSGTIFDNILLTDDPAYAKKYVEKTWKETA 760
PEIDNP+Y P+SN+Y Y+N +G DLWQVKSGTIFDN L+T+D AYA+++ +TW T
Sbjct: 292 PEIDNPEYSPDSNIYAYENFAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTK 351
Query: 761 AGEKKMKDKQDEIER 805
A EK+MKDKQDE +R
Sbjct: 352 AAEKQMKDKQDEEQR 366
Score = 30.0 bits (66), Expect = 7.9
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +1
Query: 1 HEQTIDCGGGYV 36
HEQ IDCGGGYV
Sbjct: 99 HEQNIDCGGGYV 110
>sp|P42918|CRTC2_BOVIN Calreticulin, brain isoform 2 precursor (CRP55) (Calregulin)
(HACBP)
Length = 421
Score = 379 bits (972), Expect = e-105
Identities = 171/250 (68%), Positives = 200/250 (80%)
Frame = +2
Query: 56 IDQTKFHGETPYHIMFGPDICGLSTKKVHVIFNYKGQNHLIKKEIRCKDDEFSHVYTLIV 235
+DQT HG++ Y+IMFGPDICG TKKVHVIFNYKG+N LI K+IRCKDDEF+H+YTLIV
Sbjct: 121 LDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIV 180
Query: 236 SPDNTYEVLIDNEKVESGNLEDDWDFLAPKKIKDPNAKKPEDWEDNEKIDDSTDKKPEDW 415
P+NTYEV IDN +VESG+LEDDWDFL PKKIKDP+A KPEDW+D KIDD TD KPEDW
Sbjct: 181 RPNNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDAAKPEDWDDRAKIDDPTDSKPEDW 240
Query: 416 DKPKTIADPKAKKPXXXXXXXXXXXXAPQIDNPEYKGEWKPKQIDNPKYKGPWIHPEIDN 595
DKP+ I DP AKKP P I NPEYKGEWKP+QIDNP+YKG WIHPEIDN
Sbjct: 241 DKPEHIPDPDAKKPEDWDEEMDGEWEPPLIQNPEYKGEWKPRQIDNPEYKGIWIHPEIDN 300
Query: 596 PDYKPESNLYLYKNIGSIGFDLWQVKSGTIFDNILLTDDPAYAKKYVEKTWKETAAGEKK 775
P+Y P+SN+Y Y+N +G DLWQVKSGTIFDN L+T+D AYA+++ +TW T A EK+
Sbjct: 301 PEYSPDSNIYAYENFAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQ 360
Query: 776 MKDKQDEIER 805
MKDKQDE +R
Sbjct: 361 MKDKQDEEQR 370
>sp|P14211|CRTC_MOUSE Calreticulin precursor (CRP55) (Calregulin) (HACBP) (ERp60)
Length = 416
Score = 376 bits (966), Expect = e-104
Identities = 171/257 (66%), Positives = 200/257 (77%)
Frame = +2
Query: 41 LMSSDIDQTKFHGETPYHIMFGPDICGLSTKKVHVIFNYKGQNHLIKKEIRCKDDEFSHV 220
L S +DQ HG++ Y+IMFGPDICG TKKVHVIFNYKG+N LI K+IRCKDDEF+H+
Sbjct: 112 LFPSGLDQKDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHL 171
Query: 221 YTLIVSPDNTYEVLIDNEKVESGNLEDDWDFLAPKKIKDPNAKKPEDWEDNEKIDDSTDK 400
YTLIV PDNTYEV IDN +VESG+LEDDWDFL PKKIKDP+A KPEDW++ KIDD TD
Sbjct: 172 YTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDAAKPEDWDERAKIDDPTDS 231
Query: 401 KPEDWDKPKTIADPKAKKPXXXXXXXXXXXXAPQIDNPEYKGEWKPKQIDNPKYKGPWIH 580
KPEDWDKP+ I DP AKKP P I NPEYKGEWKP+QIDNP YKG WIH
Sbjct: 232 KPEDWDKPEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIH 291
Query: 581 PEIDNPDYKPESNLYLYKNIGSIGFDLWQVKSGTIFDNILLTDDPAYAKKYVEKTWKETA 760
PEIDNP+Y P++N+Y Y + +G DLWQVKSGTIFDN L+T+D AYA+++ +TW T
Sbjct: 292 PEIDNPEYSPDANIYAYDSFAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTK 351
Query: 761 AGEKKMKDKQDEIERKK 811
A EK+MKDKQDE +R K
Sbjct: 352 AAEKQMKDKQDEEQRLK 368
Score = 30.0 bits (66), Expect = 7.9
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +1
Query: 1 HEQTIDCGGGYV 36
HEQ IDCGGGYV
Sbjct: 99 HEQNIDCGGGYV 110
>sp|Q8K3H7|CRTC_CRIGR Calreticulin precursor (CRP55) (Calregulin) (HACBP) (ERp60)
Length = 417
Score = 375 bits (963), Expect = e-104
Identities = 170/257 (66%), Positives = 199/257 (77%)
Frame = +2
Query: 41 LMSSDIDQTKFHGETPYHIMFGPDICGLSTKKVHVIFNYKGQNHLIKKEIRCKDDEFSHV 220
L +DQ HG++ Y+IMFGPDICG TKKVHVIFNYKG+N LI K+IRCKDDEF+H+
Sbjct: 112 LFPGSLDQKDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHL 171
Query: 221 YTLIVSPDNTYEVLIDNEKVESGNLEDDWDFLAPKKIKDPNAKKPEDWEDNEKIDDSTDK 400
YTLIV PDNTYEV IDN +VESG+LEDDWDFL PKKIKDP+A KPEDW++ KIDD TD
Sbjct: 172 YTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDAAKPEDWDERAKIDDPTDS 231
Query: 401 KPEDWDKPKTIADPKAKKPXXXXXXXXXXXXAPQIDNPEYKGEWKPKQIDNPKYKGPWIH 580
KPEDWDKP+ I DP AKKP P I NPEYKGEWKP+QIDNP YKG WIH
Sbjct: 232 KPEDWDKPEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIH 291
Query: 581 PEIDNPDYKPESNLYLYKNIGSIGFDLWQVKSGTIFDNILLTDDPAYAKKYVEKTWKETA 760
PEIDNP+Y P++N+Y Y + +G DLWQVKSGTIFDN L+T+D AYA+++ +TW T
Sbjct: 292 PEIDNPEYSPDANIYAYDSFAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTK 351
Query: 761 AGEKKMKDKQDEIERKK 811
A EK+MKDKQDE +R K
Sbjct: 352 ASEKQMKDKQDEEQRLK 368
Score = 30.0 bits (66), Expect = 7.9
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +1
Query: 1 HEQTIDCGGGYV 36
HEQ IDCGGGYV
Sbjct: 99 HEQNIDCGGGYV 110
>sp|P18418|CRTC_RAT Calreticulin precursor (CRP55) (Calregulin) (HACBP) (ERp60) (CALBP)
(Calcium-binding protein 3) (CABP3)
Length = 416
Score = 375 bits (962), Expect = e-103
Identities = 170/257 (66%), Positives = 199/257 (77%)
Frame = +2
Query: 41 LMSSDIDQTKFHGETPYHIMFGPDICGLSTKKVHVIFNYKGQNHLIKKEIRCKDDEFSHV 220
L +DQ HG++ Y+IMFGPDICG TKKVHVIFNYKG+N LI K+IRCKDDEF+H+
Sbjct: 112 LFPGGLDQKDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHL 171
Query: 221 YTLIVSPDNTYEVLIDNEKVESGNLEDDWDFLAPKKIKDPNAKKPEDWEDNEKIDDSTDK 400
YTLIV PDNTYEV IDN +VESG+LEDDWDFL PKKIKDP+A KPEDW++ KIDD TD
Sbjct: 172 YTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDAAKPEDWDERAKIDDPTDS 231
Query: 401 KPEDWDKPKTIADPKAKKPXXXXXXXXXXXXAPQIDNPEYKGEWKPKQIDNPKYKGPWIH 580
KPEDWDKP+ I DP AKKP P I NPEYKGEWKP+QIDNP YKG WIH
Sbjct: 232 KPEDWDKPEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIH 291
Query: 581 PEIDNPDYKPESNLYLYKNIGSIGFDLWQVKSGTIFDNILLTDDPAYAKKYVEKTWKETA 760
PEIDNP+Y P++N+Y Y + +G DLWQVKSGTIFDN L+T+D AYA+++ +TW T
Sbjct: 292 PEIDNPEYSPDANIYAYDSFAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTK 351
Query: 761 AGEKKMKDKQDEIERKK 811
A EK+MKDKQDE +R K
Sbjct: 352 AAEKQMKDKQDEEQRLK 368
Score = 30.0 bits (66), Expect = 7.9
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +1
Query: 1 HEQTIDCGGGYV 36
HEQ IDCGGGYV
Sbjct: 99 HEQNIDCGGGYV 110
>sp|P15253|CRTC_RABIT Calreticulin precursor (CRP55) (Calregulin) (HACBP) (ERp60)
Length = 418
Score = 374 bits (960), Expect = e-103
Identities = 169/257 (65%), Positives = 199/257 (77%)
Frame = +2
Query: 41 LMSSDIDQTKFHGETPYHIMFGPDICGLSTKKVHVIFNYKGQNHLIKKEIRCKDDEFSHV 220
L + +DQ HG++ Y+IMFGPDICG TKKVHVIFNYKG+N LI K+IRCKDDEF+H+
Sbjct: 112 LFPAGLDQKDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHL 171
Query: 221 YTLIVSPDNTYEVLIDNEKVESGNLEDDWDFLAPKKIKDPNAKKPEDWEDNEKIDDSTDK 400
YTLIV PDNTYEV IDN +VESG+LEDDWDFL PKKIKDP+A KPEDW++ KIDD TD
Sbjct: 172 YTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDASKPEDWDERAKIDDPTDS 231
Query: 401 KPEDWDKPKTIADPKAKKPXXXXXXXXXXXXAPQIDNPEYKGEWKPKQIDNPKYKGPWIH 580
KPEDWDKP+ I DP AKKP P I NPEYKGEWKP+QIDNP YKG WIH
Sbjct: 232 KPEDWDKPEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIH 291
Query: 581 PEIDNPDYKPESNLYLYKNIGSIGFDLWQVKSGTIFDNILLTDDPAYAKKYVEKTWKETA 760
PEIDNP+Y P++N+Y Y + +G DLWQVKSGTIFDN L+T+D AYA+++ +TW T
Sbjct: 292 PEIDNPEYSPDANIYAYDSFAVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTK 351
Query: 761 AGEKKMKDKQDEIERKK 811
EK+MKDKQDE +R K
Sbjct: 352 TAEKQMKDKQDEEQRLK 368
Score = 30.0 bits (66), Expect = 7.9
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +1
Query: 1 HEQTIDCGGGYV 36
HEQ IDCGGGYV
Sbjct: 99 HEQNIDCGGGYV 110
>sp|P29413|CRTC_DROME Calreticulin precursor (CRP55) (Calregulin) (HACBP)
Length = 406
Score = 374 bits (959), Expect = e-103
Identities = 174/257 (67%), Positives = 196/257 (76%)
Frame = +2
Query: 41 LMSSDIDQTKFHGETPYHIMFGPDICGLSTKKVHVIFNYKGQNHLIKKEIRCKDDEFSHV 220
L +DQT HGE+PY IMFGPDICG TKKVHVIF+YKG+NHLI K+IRCKDD ++H
Sbjct: 112 LFDCSLDQTDMHGESPYEIMFGPDICGPGTKKVHVIFSYKGKNHLISKDIRCKDDVYTHF 171
Query: 221 YTLIVSPDNTYEVLIDNEKVESGNLEDDWDFLAPKKIKDPNAKKPEDWEDNEKIDDSTDK 400
YTLIV PDNTYEVLIDNEKVESGNLEDDWDFLAPKKIKDP A KPEDW+D I D DK
Sbjct: 172 YTLIVRPDNTYEVLIDNEKVESGNLEDDWDFLAPKKIKDPTATKPEDWDDRATIPDPDDK 231
Query: 401 KPEDWDKPKTIADPKAKKPXXXXXXXXXXXXAPQIDNPEYKGEWKPKQIDNPKYKGPWIH 580
KPEDWDKP+ I DP A KP P IDNPE+KGEW+PKQ+DNP YKG W H
Sbjct: 232 KPEDWDKPEHIPDPDATKPEDWDDEMDGEWEPPMIDNPEFKGEWQPKQLDNPNYKGAWEH 291
Query: 581 PEIDNPDYKPESNLYLYKNIGSIGFDLWQVKSGTIFDNILLTDDPAYAKKYVEKTWKETA 760
PEI NP+Y P+ LYL K I ++GFDLWQVKSGTIFDN+L+TDD A K + K T
Sbjct: 292 PEIANPEYVPDDKLYLRKEICTLGFDLWQVKSGTIFDNVLITDDVELAAKAAAEV-KNTQ 350
Query: 761 AGEKKMKDKQDEIERKK 811
AGEKKMK+ QDE++RKK
Sbjct: 351 AGEKKMKEAQDEVQRKK 367
Score = 30.0 bits (66), Expect = 7.9
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +1
Query: 1 HEQTIDCGGGYV 36
HEQ IDCGGGYV
Sbjct: 99 HEQNIDCGGGYV 110
>sp|P11012|RAL1_ONCVO RAL-1 protein precursor (RAL1 antigen) (41 kDa larval antigen)
Length = 388
Score = 367 bits (941), Expect = e-101
Identities = 171/257 (66%), Positives = 200/257 (77%)
Frame = +2
Query: 41 LMSSDIDQTKFHGETPYHIMFGPDICGLSTKKVHVIFNYKGQNHLIKKEIRCKDDEFSHV 220
LM+SD++ HGETPYHIMFGPDICG TKKVHVIF+YK +NH+IKK+IRCKDD F+H+
Sbjct: 110 LMASDVNLEDSHGETPYHIMFGPDICGPGTKKVHVIFHYKDRNHMIKKDIRCKDDVFTHL 169
Query: 221 YTLIVSPDNTYEVLIDNEKVESGNLEDDWDFLAPKKIKDPNAKKPEDWEDNEKIDDSTDK 400
YTLIV+ DNTYEV ID EK ESG LE DWDFL PKKIKDP+AKKPEDW++ E IDD DK
Sbjct: 170 YTLIVNSDNTYEVQIDGEKAESGELEADWDFLPPKKIKDPDAKKPEDWDEREFIDDEDDK 229
Query: 401 KPEDWDKPKTIADPKAKKPXXXXXXXXXXXXAPQIDNPEYKGEWKPKQIDNPKYKGPWIH 580
KPEDWDKP+ I DP AKKP P +DNPEYKGEWKPKQ NP YKG WIH
Sbjct: 230 KPEDWDKPEHIPDPDAKKPEDWDDEMDGEWEPPMVDNPEYKGEWKPKQKKNPAYKGKWIH 289
Query: 581 PEIDNPDYKPESNLYLYKNIGSIGFDLWQVKSGTIFDNILLTDDPAYAKKYVEKTWKETA 760
PEI+ PDY P+ NLY+Y +IG+IGFDLWQVKSGTIFD++++TD AKK+ EKT K T
Sbjct: 290 PEIEIPDYTPDDNLYVYDDIGAIGFDLWQVKSGTIFDDVIVTDSVEEAKKFGEKTLKITR 349
Query: 761 AGEKKMKDKQDEIERKK 811
GEKK K K+ + ++KK
Sbjct: 350 EGEKK-KGKKTKKQKKK 365
>sp|Q06814|CRTC_SCHMA Calreticulin precursor (SM4 protein)
Length = 393
Score = 346 bits (888), Expect = 4e-95
Identities = 161/262 (61%), Positives = 194/262 (74%), Gaps = 5/262 (1%)
Frame = +2
Query: 41 LMSSDIDQTKFHGETPYHIMFGPDICGLSTKKVHVIFNYKGQNHLIKKEIRCKDDEFSHV 220
L+ SDID KFHGE+PY IMFGPDICG++TKKVHVIFNYKG+NHLIKKEI CKDD +H+
Sbjct: 110 LLGSDIDPKKFHGESPYKIMFGPDICGMATKKVHVIFNYKGKNHLIKKEIPCKDDLKTHL 169
Query: 221 YTLIVSPDNTYEVLIDNEKVESGNLEDDWDFLAPKKIKDPNAKKPEDWEDNEKIDDSTDK 400
YTLIV+P+N YEVL+DN KVE G+LEDDWD L PKKI DPN KKP+DW D + IDD DK
Sbjct: 170 YTLIVNPNNKYEVLVDNAKVEEGSLEDDWDMLPPKKIDDPNDKKPDDWVDEQFIDDPDDK 229
Query: 401 KPEDWDKPKTIADPKAKKPXXXXXXXXXXXXAPQIDNPEYKGEWKPKQIDNPKYKGPWIH 580
KP++WD+PKTI D AKKP PQ DNPEYKGEW P++IDNPKYKG W
Sbjct: 230 KPDNWDQPKTIPDMDAKKPDDWDDAMDGEWERPQKDNPEYKGEWTPRRIDNPKYKGEWKP 289
Query: 581 PEIDNPDYKPESNLYLYKNIGSIGFDLWQVKSGTIFDNILLTDDPAYAKKYVEKTWK--- 751
+IDNP+YK + LY+ +IG +GFDLWQV SG+IFDNIL+TD P +AK+ E+ W+
Sbjct: 290 VQIDNPEYKHDPELYVLNDIGYVGFDLWQVDSGSIFDNILITDSPDFAKEEGERLWRKRY 349
Query: 752 --ETAAGEKKMKDKQDEIERKK 811
E A + KD ++E E K
Sbjct: 350 DAEVAKEQSSAKDDKEEAEETK 371
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,202,517
Number of Sequences: 369166
Number of extensions: 1834695
Number of successful extensions: 7100
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6619
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7811456130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)