Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_006_G17
(593 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P51121|GLNA_XENLA Glutamine synthetase (Glutamate--ammon... 265 5e-71
sp|Q9QY94|GLNA_ACOCA Glutamine synthetase (Glutamate--ammon... 261 1e-69
sp|Q8HZM5|GLNA_CANFA Glutamine synthetase (Glutamate--ammon... 259 3e-69
sp|P16580|GLNA_CHICK Glutamine synthetase (Glutamate--ammon... 259 4e-69
sp|P15104|GLNA_HUMAN Glutamine synthetase (Glutamate--ammon... 258 6e-69
sp|Q4R7U3|GLNA_MACFA Glutamine synthetase (Glutamate--ammon... 258 6e-69
sp|Q04831|GLNA_PANAR Glutamine synthetase (Glutamate--ammon... 258 1e-68
sp|P46410|GLNA_PIG Glutamine synthetase (Glutamate--ammonia... 257 2e-68
sp|P20478|GLNA2_DROME Glutamine synthetase 2, cytoplasmic (... 256 2e-68
sp|P15105|GLNA_MOUSE Glutamine synthetase (Glutamate--ammon... 256 2e-68
>sp|P51121|GLNA_XENLA Glutamine synthetase (Glutamate--ammonia ligase)
Length = 392
Score = 265 bits (678), Expect = 5e-71
Identities = 117/166 (70%), Positives = 143/166 (86%)
Frame = +3
Query: 3 MPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYS 182
MP+QWEFQ+GPCEGI++ DHLWMAR++LHRV EDFGVV + DPKP+ G+WNGAG HTNYS
Sbjct: 198 MPSQWEFQVGPCEGIDMGDHLWMARFILHRVCEDFGVVATLDPKPMTGNWNGAGCHTNYS 257
Query: 183 TIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGVA 362
T MR GG+K+IE+AIEK+ KRH HI YDP G+DN RRLTG+HETS+I +FS+GVA
Sbjct: 258 TESMRVEGGLKHIEDAIEKLGKRHDYHICVYDPRGGKDNSRRLTGQHETSSIHEFSAGVA 317
Query: 363 NRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 500
NRGASIRIPRQV ++G+GY EDRRP++NCDPY+VTE +VRTTIL +
Sbjct: 318 NRGASIRIPRQVGQEGYGYFEDRRPAANCDPYAVTEALVRTTILNE 363
>sp|Q9QY94|GLNA_ACOCA Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 261 bits (666), Expect = 1e-69
Identities = 119/166 (71%), Positives = 138/166 (83%)
Frame = +3
Query: 3 MPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYS 182
MPAQWEFQIGPCEGI + DHLW+AR++LHRV EDFGV+ +FDPKPI G+WNGAG HTN+S
Sbjct: 198 MPAQWEFQIGPCEGIRMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFS 257
Query: 183 TIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGVA 362
T MR G+KYIEEAI+K+SKRH HI AYDP G DN RRLTG HETS I+DFS+GVA
Sbjct: 258 TKAMREENGLKYIEEAIDKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVA 317
Query: 363 NRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 500
NRGASIRIPR V ++ GY EDRRPS+NCDPY+VTE IVRT +L +
Sbjct: 318 NRGASIRIPRTVGQEKRGYFEDRRPSANCDPYAVTEAIVRTCLLNE 363
>sp|Q8HZM5|GLNA_CANFA Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 259 bits (663), Expect = 3e-69
Identities = 117/166 (70%), Positives = 139/166 (83%)
Frame = +3
Query: 3 MPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYS 182
MPAQWEFQIGPCEGI++ DHLW+AR++LHRV EDFGV+ +FDPKPI G+WNGAG HTN+S
Sbjct: 198 MPAQWEFQIGPCEGIDMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFS 257
Query: 183 TIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGVA 362
T MR G+KYIEE+IEK+SKRH HI AYDP G DN RRLTG HETS I+DFS+GVA
Sbjct: 258 TKAMREENGLKYIEESIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVA 317
Query: 363 NRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 500
NRGASIRIPR V ++ GY EDRRPS+NCDP+SVTE ++RT +L +
Sbjct: 318 NRGASIRIPRTVGQEKKGYFEDRRPSANCDPFSVTEALIRTCLLNE 363
>sp|P16580|GLNA_CHICK Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 259 bits (662), Expect = 4e-69
Identities = 118/166 (71%), Positives = 138/166 (83%)
Frame = +3
Query: 3 MPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYS 182
MPAQWEFQ+GPCEGI + DHLW+AR++LHRV EDFGV+VSFDPKPI G+WNGAG HTN+S
Sbjct: 198 MPAQWEFQVGPCEGIEMGDHLWIARFILHRVCEDFGVIVSFDPKPIPGNWNGAGCHTNFS 257
Query: 183 TIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGVA 362
T MR GG+K+IEEAIEK+SKRH HI AYDP G DN RRLTG HETS+I +FS+GVA
Sbjct: 258 TKNMREDGGLKHIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSSIHEFSAGVA 317
Query: 363 NRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 500
NRGASIRIPR V + GY EDR PS+NCDPY+VTE +VRT +L +
Sbjct: 318 NRGASIRIPRNVGHEKKGYFEDRGPSANCDPYAVTEALVRTCLLNE 363
>sp|P15104|GLNA_HUMAN Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 258 bits (660), Expect = 6e-69
Identities = 117/166 (70%), Positives = 138/166 (83%)
Frame = +3
Query: 3 MPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYS 182
MPAQWEFQIGPCEGI++ DHLW+AR++LHRV EDFGV+ +FDPKPI G+WNGAG HTN+S
Sbjct: 198 MPAQWEFQIGPCEGISMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFS 257
Query: 183 TIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGVA 362
T MR G+KYIEEAIEK+SKRH HI AYDP G DN RRLTG HETS I+DFS+GVA
Sbjct: 258 TKAMREENGLKYIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVA 317
Query: 363 NRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 500
NR ASIRIPR V ++ GY EDRRPS+NCDP+SVTE ++RT +L +
Sbjct: 318 NRSASIRIPRTVGQEKKGYFEDRRPSANCDPFSVTEALIRTCLLNE 363
>sp|Q4R7U3|GLNA_MACFA Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 374
Score = 258 bits (660), Expect = 6e-69
Identities = 117/166 (70%), Positives = 138/166 (83%)
Frame = +3
Query: 3 MPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYS 182
MPAQWEFQIGPCEGI++ DHLW+AR++LHRV EDFGV+ +FDPKPI G+WNGAG HTN+S
Sbjct: 199 MPAQWEFQIGPCEGISMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFS 258
Query: 183 TIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGVA 362
T MR G+KYIEEAIEK+SKRH HI AYDP G DN RRLTG HETS I+DFS+GVA
Sbjct: 259 TKAMREENGLKYIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVA 318
Query: 363 NRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 500
NR ASIRIPR V ++ GY EDRRPS+NCDP+SVTE ++RT +L +
Sbjct: 319 NRSASIRIPRTVGQEKKGYFEDRRPSANCDPFSVTEALIRTCLLNE 364
>sp|Q04831|GLNA_PANAR Glutamine synthetase (Glutamate--ammonia ligase)
Length = 361
Score = 258 bits (658), Expect = 1e-68
Identities = 121/166 (72%), Positives = 138/166 (83%)
Frame = +3
Query: 3 MPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYS 182
MPAQWEFQ+GPCEGI + D LWMARYLLHRVAEDF VVV+ DPKPI GDWNGAG HTN+S
Sbjct: 195 MPAQWEFQVGPCEGITMGDDLWMARYLLHRVAEDFDVVVTLDPKPIPGDWNGAGMHTNFS 254
Query: 183 TIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGVA 362
T MR P GI IE AI+K+SK H +HI+AYDPH G+DN RRLTG +ETS+I DFS+GVA
Sbjct: 255 TEAMRGPNGILEIESAIDKLSKVHEKHIKAYDPHAGKDNERRLTGHYETSSIHDFSAGVA 314
Query: 363 NRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 500
NRGASIRIPR V+E+ GYLEDRRPSSN DPY V+ER+VRT L +
Sbjct: 315 NRGASIRIPRGVAEEKTGYLEDRRPSSNADPYVVSERLVRTICLNE 360
>sp|P46410|GLNA_PIG Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 257 bits (656), Expect = 2e-68
Identities = 116/166 (69%), Positives = 138/166 (83%)
Frame = +3
Query: 3 MPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYS 182
MPAQWEFQIGPCEGI++ DHLW+AR++LHRV EDFGV+ +FDPKPI G+WNGAG HTN+S
Sbjct: 198 MPAQWEFQIGPCEGIDMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFS 257
Query: 183 TIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGVA 362
T MR G+KYIEEAIEK+SKRH HI AYDP G DN RRLTG HETS I+DFS+GVA
Sbjct: 258 TKAMREENGLKYIEEAIEKLSKRHQYHIRAYDPKGGLDNTRRLTGFHETSNINDFSAGVA 317
Query: 363 NRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 500
NRGASIRIPR ++ GY EDRRPS+NCDP++VTE ++RT +L +
Sbjct: 318 NRGASIRIPRTGGQEKKGYFEDRRPSANCDPFAVTEALIRTCLLNE 363
>sp|P20478|GLNA2_DROME Glutamine synthetase 2, cytoplasmic (Glutamate--ammonia ligase 2)
Length = 369
Score = 256 bits (655), Expect = 2e-68
Identities = 115/166 (69%), Positives = 140/166 (84%)
Frame = +3
Query: 3 MPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYS 182
MPAQWEFQ+GPCEGI++ D LWMAR+LLHR++E+FG+V + DPKP+ GDWNGAGAHTN S
Sbjct: 204 MPAQWEFQVGPCEGISIGDDLWMARFLLHRISEEFGIVSTLDPKPMPGDWNGAGAHTNVS 263
Query: 183 TIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGVA 362
T MR GGI+ IE+A+ K+SK H HI AYDP +G+DN RRLTG+HETS+I+DFS+GVA
Sbjct: 264 TKAMREDGGIRDIEKAVAKLSKCHERHIRAYDPKQGQDNARRLTGKHETSSINDFSAGVA 323
Query: 363 NRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 500
NRG SIRIPR V++DG GY EDRRPSSNCDPYSV E I+RT L++
Sbjct: 324 NRGCSIRIPRGVNDDGKGYFEDRRPSSNCDPYSVVEAILRTICLDE 369
>sp|P15105|GLNA_MOUSE Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 256 bits (655), Expect = 2e-68
Identities = 117/166 (70%), Positives = 137/166 (82%)
Frame = +3
Query: 3 MPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYS 182
MPAQWEFQIGPCEGI + DHLW+AR++LHRV EDFGV+ +FDPKPI G+WNGAG HTN+S
Sbjct: 198 MPAQWEFQIGPCEGIRMGDHLWIARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFS 257
Query: 183 TIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGVA 362
T MR G+K+IEEAI+K+SKRH HI AYDP G DN R LTG HETS I+DFS+GVA
Sbjct: 258 TKAMREENGLKWIEEAIDKLSKRHQYHIRAYDPKGGLDNARALTGFHETSNINDFSAGVA 317
Query: 363 NRGASIRIPRQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 500
NRGASIRIPR V ++ GY EDRRPS+NCDPY+VTE IVRT +L +
Sbjct: 318 NRGASIRIPRTVGQEKKGYFEDRRPSANCDPYAVTEAIVRTCLLNE 363
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,183,489
Number of Sequences: 369166
Number of extensions: 1226057
Number of successful extensions: 3544
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3459
length of database: 68,354,980
effective HSP length: 105
effective length of database: 48,957,805
effective search space used: 4504118060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)