Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_006_G09
(744 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 293 4e-79
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 293 4e-79
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 293 4e-79
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 289 5e-78
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 286 3e-77
sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein 286 3e-77
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 285 7e-77
sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein 285 9e-77
sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70) 280 4e-75
sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (... 278 8e-75
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 293 bits (749), Expect = 4e-79
Identities = 147/220 (66%), Positives = 166/220 (75%)
Frame = +2
Query: 2 TFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGIL 181
TFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDANGIL
Sbjct: 427 TFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIL 486
Query: 182 NVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYA 361
NVSAV+K TGKENKITITNDKGRLSK+DIERMV ++++KNSLESYA
Sbjct: 487 NVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYA 546
Query: 362 YQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPI 541
+ MKATVEDEKL+ KI++ D++ I+DKC E I WLDKNQ A K+EF++ KELEKVCNPI
Sbjct: 547 FNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPI 606
Query: 542 MTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 661
+TK+YQ GPT+EEVD
Sbjct: 607 ITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 293 bits (749), Expect = 4e-79
Identities = 147/220 (66%), Positives = 166/220 (75%)
Frame = +2
Query: 2 TFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGIL 181
TFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDANGIL
Sbjct: 427 TFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIL 486
Query: 182 NVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYA 361
NVSAV+K TGKENKITITNDKGRLSK+DIERMV ++++KNSLESYA
Sbjct: 487 NVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYA 546
Query: 362 YQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPI 541
+ MKATVEDEKL+ KI++ D++ I+DKC E I WLDKNQ A K+EF++ KELEKVCNPI
Sbjct: 547 FNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPI 606
Query: 542 MTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 661
+TK+YQ GPT+EEVD
Sbjct: 607 ITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 293 bits (749), Expect = 4e-79
Identities = 147/220 (66%), Positives = 166/220 (75%)
Frame = +2
Query: 2 TFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGIL 181
TFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDANGIL
Sbjct: 427 TFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIL 486
Query: 182 NVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYA 361
NVSAV+K TGKENKITITNDKGRLSK+DIERMV ++++KNSLESYA
Sbjct: 487 NVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYA 546
Query: 362 YQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPI 541
+ MKATVEDEKL+ KI++ D++ I+DKC E I WLDKNQ A K+EF++ KELEKVCNPI
Sbjct: 547 FNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPI 606
Query: 542 MTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 661
+TK+YQ GPT+EEVD
Sbjct: 607 ITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 289 bits (740), Expect = 5e-78
Identities = 147/223 (65%), Positives = 166/223 (74%), Gaps = 3/223 (1%)
Frame = +2
Query: 2 TFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGIL 181
TFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDANGI+
Sbjct: 427 TFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIM 486
Query: 182 NVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYA 361
NVSAV+K TGKENKITITNDKGRLSK+DIERMV +++AKN LESYA
Sbjct: 487 NVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYA 546
Query: 362 YQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPI 541
+ MK+TVEDEKLK KIS+ D++ I+DKC E IGWLDKNQ A ++EF++ KELEKVCNPI
Sbjct: 547 FNMKSTVEDEKLKGKISDEDKQKILDKCNEVIGWLDKNQTAEREEFEHQQKELEKVCNPI 606
Query: 542 MTKMYQ---XXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 661
+TK+YQ GPT+EEVD
Sbjct: 607 ITKLYQSAGGMPGGMPEGMPGGFPGAGAAPGGGSSGPTIEEVD 649
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 286 bits (733), Expect = 3e-77
Identities = 145/225 (64%), Positives = 166/225 (73%), Gaps = 5/225 (2%)
Frame = +2
Query: 2 TFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGIL 181
TFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDANGI+
Sbjct: 427 TFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIM 486
Query: 182 NVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYA 361
NVSA +K TGKENKITITNDKGRLSK+DIERMV ++++KNSLESYA
Sbjct: 487 NVSAADKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKCEDDVQRDKVSSKNSLESYA 546
Query: 362 YQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPI 541
+ MK+TVEDEKL+ KIS+ D+ I++KC E IGWLDKNQ A K+E+++H KELEKVCNPI
Sbjct: 547 FNMKSTVEDEKLQGKISDEDKTKILEKCNEVIGWLDKNQTAEKEEYEHHQKELEKVCNPI 606
Query: 542 MTKMYQ-----XXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 661
+TK+YQ GPT+EEVD
Sbjct: 607 ITKLYQGAGGMPGGMPEGMAGGFPGAGGAAPGGGGSSGPTIEEVD 651
>sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein
Length = 649
Score = 286 bits (733), Expect = 3e-77
Identities = 146/223 (65%), Positives = 164/223 (73%), Gaps = 3/223 (1%)
Frame = +2
Query: 2 TFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGIL 181
TFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDANGI+
Sbjct: 427 TFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIM 486
Query: 182 NVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYA 361
NVSAV+K TGKENKITITNDKGRLSK+DIERMV +++AKN LESYA
Sbjct: 487 NVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYA 546
Query: 362 YQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPI 541
+ MK+TVEDEKLK KIS+ D+ I+DKC E I WLDKNQ A KDE+++ K+LEKVCNPI
Sbjct: 547 FNMKSTVEDEKLKGKISDEDKHKILDKCNEVISWLDKNQTAEKDEYEHQQKDLEKVCNPI 606
Query: 542 MTKMYQ---XXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 661
+TK+YQ GPT+EEVD
Sbjct: 607 ITKLYQSDGGMPGGMPDGMPGGFQELGAAPGGGSSGPTIEEVD 649
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 285 bits (730), Expect = 7e-77
Identities = 146/224 (65%), Positives = 166/224 (74%), Gaps = 4/224 (1%)
Frame = +2
Query: 2 TFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGIL 181
TFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDANGIL
Sbjct: 427 TFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIL 486
Query: 182 NVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYA 361
NVSAV+K TGKENKITITNDKGRLSK+DIERMV ++++KNSL+SYA
Sbjct: 487 NVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLKSYA 546
Query: 362 YQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPI 541
+ MKATVEDEKL+ KI++ D++ I+DKC E I WLDKNQ A K+EF++ KELEKVCNPI
Sbjct: 547 FNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPI 606
Query: 542 MTKMYQ----XXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 661
+TK+YQ GPT+EEVD
Sbjct: 607 ITKLYQSAGGMPGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 650
>sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein
Length = 644
Score = 285 bits (729), Expect = 9e-77
Identities = 147/220 (66%), Positives = 163/220 (74%)
Frame = +2
Query: 2 TFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGIL 181
TFTTYSDNQPGVLIQVYEGERA+TKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGIL
Sbjct: 426 TFTTYSDNQPGVLIQVYEGERALTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGIL 485
Query: 182 NVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYA 361
NVSA +K TGK+NKITITNDKGRLSKD+IERMV RIAAKN+LESYA
Sbjct: 486 NVSAQDKSTGKQNKITITNDKGRLSKDEIERMVQEAEKYKADDEAQKDRIAAKNALESYA 545
Query: 362 YQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPI 541
+ MK T+EDEKLKDKISE D+K I +KC E + WLD NQ A KDEF++ KELE VCNPI
Sbjct: 546 FNMKQTIEDEKLKDKISEEDKKKIQEKCDETVRWLDGNQTAEKDEFEHRQKELESVCNPI 605
Query: 542 MTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 661
+TK+YQ GPT+EEVD
Sbjct: 606 ITKLYQSAGGMPGGMPGGMPGGAPGAGSTG-GGPTIEEVD 644
>sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70)
Length = 644
Score = 280 bits (715), Expect = 4e-75
Identities = 140/220 (63%), Positives = 164/220 (74%)
Frame = +2
Query: 2 TFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGIL 181
TFTTYSDNQPGV+IQVYEGERAMTKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGIL
Sbjct: 429 TFTTYSDNQPGVMIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGIL 488
Query: 182 NVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYA 361
NVSAV+K TGKENKITITNDKGRLSK+DIERMV +IAAKNSLESYA
Sbjct: 489 NVSAVDKSTGKENKITITNDKGRLSKEDIERMVQDADKYKAEDDAQREKIAAKNSLESYA 548
Query: 362 YQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPI 541
+ MK++VED+ +K KIS+ D+K +VD+C + I WL+ NQ K+E+++ KELEKVC PI
Sbjct: 549 FNMKSSVEDDNMKGKISQEDKKKVVDRCDQTISWLENNQLGDKEEYEHQLKELEKVCQPI 608
Query: 542 MTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 661
+TK+YQ QGPT+EE+D
Sbjct: 609 ITKLYQ----QGGMPTGCCGDQARTSSGDSSQGPTIEEID 644
>sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (Heat shock 70 kDa protein 2)
Length = 639
Score = 278 bits (712), Expect = 8e-75
Identities = 141/220 (64%), Positives = 161/220 (73%)
Frame = +2
Query: 2 TFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGIL 181
TFTTYSDNQ VL+QVYEGERAMTKDNNLLGKF+L GIPPAPRGVPQIEVTFDIDANGIL
Sbjct: 430 TFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGIL 489
Query: 182 NVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYA 361
NV+A +K TGKENKITITNDKGRLSKDDI+RMV R+AAKN+LESY
Sbjct: 490 NVTAADKSTGKENKITITNDKGRLSKDDIDRMVQEAERYKSEDEANRDRVAAKNALESYT 549
Query: 362 YQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPI 541
Y +K TVEDEKL+ KISE D+ I+DKCQE I WLD+NQ A KDE+++ KELE+VCNPI
Sbjct: 550 YNIKQTVEDEKLRGKISEQDKNKILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPI 609
Query: 542 MTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 661
++K+YQ GPT+EEVD
Sbjct: 610 ISKLYQ----------GGPGGGSGGGGSGASGGPTIEEVD 639
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,558,335
Number of Sequences: 369166
Number of extensions: 898019
Number of successful extensions: 3586
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3393
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 6728100400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)