Planarian EST Database


Dr_sW_006_G02

BLASTX 2.2.12 [Aug-07-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dr_sW_006_G02
         (734 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P53471|ACT2_SCHMA  Actin-2                                     405   e-113
sp|P68556|ACT1_DIPDE  Actin-1/4 >gi|55976640|sp|P68555|ACT_T...   404   e-112
sp|P53456|ACT2_DIPDE  Actin-2                                     404   e-112
sp|P29751|ACTB_RABIT  Actin, cytoplasmic 1 (Beta-actin)           402   e-112
sp|P60712|ACTB_BOVIN  Actin, cytoplasmic 1 (Beta-actin) >gi|...   402   e-112
sp|P63260|ACTG_MOUSE  Actin, cytoplasmic 2 (Gamma-actin) >gi...   402   e-112
sp|P63256|ACTG_ANSAN  Actin, cytoplasmic 2 (Gamma-actin)          402   e-112
sp|P53505|ACT5_XENLA  Actin, cytoplasmic type 5                   402   e-112
sp|P84336|ACTB_CAMDR  Actin, cytoplasmic 1 (Beta-actin)           402   e-112
sp|P53478|ACT5_CHICK  Actin, cytoplasmic type 5                   402   e-112
>sp|P53471|ACT2_SCHMA Actin-2
          Length = 376

 Score =  405 bits (1040), Expect = e-113
 Identities = 200/204 (98%), Positives = 204/204 (100%)
 Frame = -2

Query: 715 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 536
           PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA
Sbjct: 173 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 232

Query: 535 SSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESAGIHETTFNSIMKCDVDIRK 356
           SSSSLEKSYELPDGQVITIGNERFRCPE+LFQPSFLGMESAG+HETTFNSIMKCDVDIRK
Sbjct: 233 SSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESAGVHETTFNSIMKCDVDIRK 292

Query: 355 DLYANTVLSGGSTMYPGIADRMQKEITALAPSTMKIKIVAPPERKYSVWIGGSILASLST 176
           DLYANTVLSGG+TM+PGIADRMQKEITALAPSTMKIKIVAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMFPGIADRMQKEITALAPSTMKIKIVAPPERKYSVWIGGSILASLST 352

Query: 175 FQQMWISKQEYDESGPGIVHRKCF 104
           FQQMWISKQEYDESGPGIVHRKCF
Sbjct: 353 FQQMWISKQEYDESGPGIVHRKCF 376
>sp|P68556|ACT1_DIPDE Actin-1/4
 sp|P68555|ACT_TAESO Actin
          Length = 376

 Score =  404 bits (1038), Expect = e-112
 Identities = 200/204 (98%), Positives = 204/204 (100%)
 Frame = -2

Query: 715 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 536
           PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA
Sbjct: 173 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 232

Query: 535 SSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESAGIHETTFNSIMKCDVDIRK 356
           SSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESAGIHE+TFN+IMKCDVDIRK
Sbjct: 233 SSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESAGIHESTFNAIMKCDVDIRK 292

Query: 355 DLYANTVLSGGSTMYPGIADRMQKEITALAPSTMKIKIVAPPERKYSVWIGGSILASLST 176
           DLYANTVLSGG+TMYPGIADRMQKEIT+LAPSTMKIKIVAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITSLAPSTMKIKIVAPPERKYSVWIGGSILASLST 352

Query: 175 FQQMWISKQEYDESGPGIVHRKCF 104
           FQQMWISKQEYDESGPGIVHRKCF
Sbjct: 353 FQQMWISKQEYDESGPGIVHRKCF 376
>sp|P53456|ACT2_DIPDE Actin-2
          Length = 376

 Score =  404 bits (1038), Expect = e-112
 Identities = 200/204 (98%), Positives = 204/204 (100%)
 Frame = -2

Query: 715 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 536
           PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA
Sbjct: 173 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 232

Query: 535 SSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESAGIHETTFNSIMKCDVDIRK 356
           SSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESAGIHE+TFN+IMKCDVDIRK
Sbjct: 233 SSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESAGIHESTFNAIMKCDVDIRK 292

Query: 355 DLYANTVLSGGSTMYPGIADRMQKEITALAPSTMKIKIVAPPERKYSVWIGGSILASLST 176
           DLYANTVLSGG+TMYPGIADRMQKEIT+LAPSTMKIKIVAPPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITSLAPSTMKIKIVAPPERKYSVWIGGSILASLST 352

Query: 175 FQQMWISKQEYDESGPGIVHRKCF 104
           FQQMWISKQEYDESGPGIVHRKCF
Sbjct: 353 FQQMWISKQEYDESGPGIVHRKCF 376
>sp|P29751|ACTB_RABIT Actin, cytoplasmic 1 (Beta-actin)
          Length = 375

 Score =  402 bits (1034), Expect = e-112
 Identities = 199/204 (97%), Positives = 202/204 (99%)
 Frame = -2

Query: 715 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 536
           PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA
Sbjct: 172 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 231

Query: 535 SSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESAGIHETTFNSIMKCDVDIRK 356
           SSSSLEKSYELPDGQVITIGNERFRCPE+LFQPSFLGMES GIHETTFNSIMKCDVDIRK
Sbjct: 232 SSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRK 291

Query: 355 DLYANTVLSGGSTMYPGIADRMQKEITALAPSTMKIKIVAPPERKYSVWIGGSILASLST 176
           DLYANTVLSGG+TMYPGIADRMQKEITALAPSTMKIKI+APPERKYSVWIGGSILASLST
Sbjct: 292 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 351

Query: 175 FQQMWISKQEYDESGPGIVHRKCF 104
           FQQMWISKQEYDESGP IVHRKCF
Sbjct: 352 FQQMWISKQEYDESGPSIVHRKCF 375
>sp|P60712|ACTB_BOVIN Actin, cytoplasmic 1 (Beta-actin)
 sp|P60713|ACTB_SHEEP Actin, cytoplasmic 1 (Beta-actin)
 sp|Q5R1X3|ACTB_PANTR Actin, cytoplasmic 1 (Beta-actin)
 sp|P60710|ACTB_MOUSE Actin, cytoplasmic 1 (Beta-actin)
 sp|Q711N9|ACTB_MESAU Actin, cytoplasmic 1 (Beta-actin)
 sp|P60708|ACTB_HORSE Actin, cytoplasmic 1 (Beta-actin)
 sp|Q76N69|ACTB_CERAE Actin, cytoplasmic 1 (Beta-actin)
 sp|Q71FK5|ACTB_CAVPO Actin, cytoplasmic 1 (Beta-actin)
 sp|P60707|ACTB_TRIVU Actin, cytoplasmic 1 (Beta-actin)
 sp|P60711|ACTB_RAT Actin, cytoplasmic 1 (Beta-actin)
 sp|P60709|ACTB_HUMAN Actin, cytoplasmic 1 (Beta-actin)
 sp|P60706|ACTB_CHICK Actin, cytoplasmic 1 (Beta-actin)
          Length = 375

 Score =  402 bits (1034), Expect = e-112
 Identities = 199/204 (97%), Positives = 202/204 (99%)
 Frame = -2

Query: 715 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 536
           PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA
Sbjct: 172 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 231

Query: 535 SSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESAGIHETTFNSIMKCDVDIRK 356
           SSSSLEKSYELPDGQVITIGNERFRCPE+LFQPSFLGMES GIHETTFNSIMKCDVDIRK
Sbjct: 232 SSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRK 291

Query: 355 DLYANTVLSGGSTMYPGIADRMQKEITALAPSTMKIKIVAPPERKYSVWIGGSILASLST 176
           DLYANTVLSGG+TMYPGIADRMQKEITALAPSTMKIKI+APPERKYSVWIGGSILASLST
Sbjct: 292 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 351

Query: 175 FQQMWISKQEYDESGPGIVHRKCF 104
           FQQMWISKQEYDESGP IVHRKCF
Sbjct: 352 FQQMWISKQEYDESGPSIVHRKCF 375
>sp|P63260|ACTG_MOUSE Actin, cytoplasmic 2 (Gamma-actin)
 sp|P63259|ACTG_RAT Actin, cytoplasmic 2 (Gamma-actin)
 sp|P63257|ACTG_TRIVU Actin, cytoplasmic 2 (Gamma-actin)
 sp|P63261|ACTG_HUMAN Actin, cytoplasmic 2 (Gamma-actin)
 sp|P63258|ACTG_BOVIN Actin, cytoplasmic 2 (Gamma-actin)
          Length = 375

 Score =  402 bits (1034), Expect = e-112
 Identities = 199/204 (97%), Positives = 202/204 (99%)
 Frame = -2

Query: 715 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 536
           PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA
Sbjct: 172 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 231

Query: 535 SSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESAGIHETTFNSIMKCDVDIRK 356
           SSSSLEKSYELPDGQVITIGNERFRCPE+LFQPSFLGMES GIHETTFNSIMKCDVDIRK
Sbjct: 232 SSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRK 291

Query: 355 DLYANTVLSGGSTMYPGIADRMQKEITALAPSTMKIKIVAPPERKYSVWIGGSILASLST 176
           DLYANTVLSGG+TMYPGIADRMQKEITALAPSTMKIKI+APPERKYSVWIGGSILASLST
Sbjct: 292 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 351

Query: 175 FQQMWISKQEYDESGPGIVHRKCF 104
           FQQMWISKQEYDESGP IVHRKCF
Sbjct: 352 FQQMWISKQEYDESGPSIVHRKCF 375
>sp|P63256|ACTG_ANSAN Actin, cytoplasmic 2 (Gamma-actin)
          Length = 375

 Score =  402 bits (1034), Expect = e-112
 Identities = 199/204 (97%), Positives = 202/204 (99%)
 Frame = -2

Query: 715 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 536
           PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA
Sbjct: 172 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 231

Query: 535 SSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESAGIHETTFNSIMKCDVDIRK 356
           SSSSLEKSYELPDGQVITIGNERFRCPE+LFQPSFLGMES GIHETTFNSIMKCDVDIRK
Sbjct: 232 SSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRK 291

Query: 355 DLYANTVLSGGSTMYPGIADRMQKEITALAPSTMKIKIVAPPERKYSVWIGGSILASLST 176
           DLYANTVLSGG+TMYPGIADRMQKEITALAPSTMKIKI+APPERKYSVWIGGSILASLST
Sbjct: 292 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 351

Query: 175 FQQMWISKQEYDESGPGIVHRKCF 104
           FQQMWISKQEYDESGP IVHRKCF
Sbjct: 352 FQQMWISKQEYDESGPSIVHRKCF 375
>sp|P53505|ACT5_XENLA Actin, cytoplasmic type 5
          Length = 376

 Score =  402 bits (1034), Expect = e-112
 Identities = 199/204 (97%), Positives = 202/204 (99%)
 Frame = -2

Query: 715 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 536
           PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA
Sbjct: 173 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 232

Query: 535 SSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESAGIHETTFNSIMKCDVDIRK 356
           SSSSLEKSYELPDGQVITIGNERFRCPE+LFQPSFLGMES GIHETTFNSIMKCDVDIRK
Sbjct: 233 SSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRK 292

Query: 355 DLYANTVLSGGSTMYPGIADRMQKEITALAPSTMKIKIVAPPERKYSVWIGGSILASLST 176
           DLYANTVLSGG+TMYPGIADRMQKEITALAPSTMKIKI+APPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 352

Query: 175 FQQMWISKQEYDESGPGIVHRKCF 104
           FQQMWISKQEYDESGP IVHRKCF
Sbjct: 353 FQQMWISKQEYDESGPSIVHRKCF 376
>sp|P84336|ACTB_CAMDR Actin, cytoplasmic 1 (Beta-actin)
          Length = 375

 Score =  402 bits (1034), Expect = e-112
 Identities = 199/204 (97%), Positives = 202/204 (99%)
 Frame = -2

Query: 715 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 536
           PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA
Sbjct: 172 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 231

Query: 535 SSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESAGIHETTFNSIMKCDVDIRK 356
           SSSSLEKSYELPDGQVITIGNERFRCPE+LFQPSFLGMES GIHETTFNSIMKCDVDIRK
Sbjct: 232 SSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRK 291

Query: 355 DLYANTVLSGGSTMYPGIADRMQKEITALAPSTMKIKIVAPPERKYSVWIGGSILASLST 176
           DLYANTVLSGG+TMYPGIADRMQKEITALAPSTMKIKI+APPERKYSVWIGGSILASLST
Sbjct: 292 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 351

Query: 175 FQQMWISKQEYDESGPGIVHRKCF 104
           FQQMWISKQEYDESGP IVHRKCF
Sbjct: 352 FQQMWISKQEYDESGPSIVHRKCF 375
>sp|P53478|ACT5_CHICK Actin, cytoplasmic type 5
          Length = 376

 Score =  402 bits (1032), Expect = e-112
 Identities = 198/204 (97%), Positives = 202/204 (99%)
 Frame = -2

Query: 715 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 536
           PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA
Sbjct: 173 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 232

Query: 535 SSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESAGIHETTFNSIMKCDVDIRK 356
           SSSSLEKSYELPDGQVITIGNERFRCPE++FQPSFLGMES GIHETTFNSIMKCDVDIRK
Sbjct: 233 SSSSLEKSYELPDGQVITIGNERFRCPEAIFQPSFLGMESCGIHETTFNSIMKCDVDIRK 292

Query: 355 DLYANTVLSGGSTMYPGIADRMQKEITALAPSTMKIKIVAPPERKYSVWIGGSILASLST 176
           DLYANTVLSGG+TMYPGIADRMQKEITALAPSTMKIKI+APPERKYSVWIGGSILASLST
Sbjct: 293 DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 352

Query: 175 FQQMWISKQEYDESGPGIVHRKCF 104
           FQQMWISKQEYDESGP IVHRKCF
Sbjct: 353 FQQMWISKQEYDESGPSIVHRKCF 376
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,105,359
Number of Sequences: 369166
Number of extensions: 1755088
Number of successful extensions: 4739
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4604
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 6582889600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)