Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_006_E24
(319 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P04929|HRPX_PLALO Histidine-rich glycoprotein precursor 44 2e-04
sp|P14586|HRP3_PLAFS Histidine-rich protein 40 0.002
sp|P40349|URB1_USTMA Siderophore biosynthesis regulatory pr... 34 0.091
sp|P04196|HRG_HUMAN Histidine-rich glycoprotein precursor (... 34 0.12
sp|Q9NBW1|FRIZ4_DROME Frizzled 4 precursor (Frizzled-4) (dFz4) 34 0.12
sp|Q8FFX9|RCNA_ECOL6 Nickel/cobalt efflux system rcnA 32 0.59
sp|Q64733|FOXB2_MOUSE Forkhead box protein B2 (Transcriptio... 31 0.77
sp|Q9W349|LOZEN_DROME Lozenge protein 31 1.0
sp|P23792|DISC_DROME Disconnected protein 30 1.3
sp|Q9WV48|SHAN1_RAT SH3 and multiple ankyrin repeat domains... 30 1.3
>sp|P04929|HRPX_PLALO Histidine-rich glycoprotein precursor
Length = 351
Score = 43.5 bits (101), Expect = 2e-04
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = -3
Query: 170 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHH 6
H H L Y +H H + HH +H +HH + H H + HH H H HH
Sbjct: 162 HHHHLGYHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAPHH 216
Score = 43.1 bits (100), Expect = 2e-04
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = -3
Query: 143 NHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHH 6
+H H + HH +H +HH + H H +H HH H H GHH
Sbjct: 200 HHHAPHHHHHHHHAPHHHHHHHHGHHHHHHHHHGHHHHHHHHHGHH 245
Score = 42.4 bits (98), Expect = 3e-04
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -3
Query: 143 NHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHH 6
+H H + HH +H +HH H H +H HH H H GHH
Sbjct: 190 HHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHGHHHHHHHHHGHH 235
Score = 41.2 bits (95), Expect = 7e-04
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = -3
Query: 170 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHR--HHIHPDHFVGHH 6
H H + +H GH + HH +H +HH + H H +H HH H H HH
Sbjct: 220 HHHGHHHHHHHHHGHHHHHHHHHGHHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHH 276
Score = 40.0 bits (92), Expect = 0.002
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -3
Query: 143 NHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHH 6
+H LGH + HH +H HH + H H H HH H +H HH
Sbjct: 112 HHHLGHHHHHHHAAHHH---HHEEHHHHHHAAHHHH-HEEHHHHHH 153
Score = 40.0 bits (92), Expect = 0.002
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = -3
Query: 170 HLHRLFYISNHRLGHVFYLHHTLLYHPFY--HHLRNLHDHFVYHRHHIH--PDHFVGHH 6
H H + +H H + HH +HP++ HHL H H +H HH H P H HH
Sbjct: 135 HHHHAAHHHHHEEHH--HHHHAAHHHPWFHHHHLGYHHHHAPHHHHHHHHAPHHHHHHH 191
Score = 40.0 bits (92), Expect = 0.002
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = -3
Query: 170 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHH 6
H H + +H GH + HH +H +HH + H H +H HH H HH
Sbjct: 210 HHHAPHHHHHHHHGHHHHHHH---HHGHHHHHHHHHGHHHHHHHHHDAHHHHHHH 261
Score = 40.0 bits (92), Expect = 0.002
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = -3
Query: 170 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHH 6
H H + +H H + HH +H HH + H H +H HH H D HH
Sbjct: 215 HHHHHHHHGHHHHHHHHHGHHHHHHHHHGHHHHHHHHHDAHHHHHHHHDAHHHHH 269
Score = 39.7 bits (91), Expect = 0.002
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = -3
Query: 170 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHR--HHIHPDHFVGHH 6
H H + +H GH + HH H +HH + H H +H HH H H HH
Sbjct: 230 HHHGHHHHHHHHHGHHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHH 286
Score = 39.7 bits (91), Expect = 0.002
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -3
Query: 170 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHH 6
H H + +H H + HH +H +HH + H H + HH H H HH
Sbjct: 242 HGHHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHH 296
Score = 39.3 bits (90), Expect = 0.003
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = -3
Query: 170 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHH--IHPDHFVGHH 6
H H + +H H + HH L +H +HH + H H +H HH H H HH
Sbjct: 93 HHHHHPHPHHHHHHHPPHHHHHLGHHHHHHHAAHHHHHEEHHHHHHAAHHHHHEEHH 149
Score = 38.9 bits (89), Expect = 0.004
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -3
Query: 143 NHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHH 6
+H H + HH +H +HH H H +H H H H GHH
Sbjct: 180 HHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHGHH 225
Score = 38.1 bits (87), Expect = 0.006
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -3
Query: 170 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHH 6
H H + ++H H HH +H +HH + HD +H HH H HH
Sbjct: 286 HHHHHHHDAHHHHHHHHDAHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHH 340
Score = 37.7 bits (86), Expect = 0.008
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -3
Query: 143 NHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHH 6
+H H + HH +H +HH + H H + HH H H HH
Sbjct: 300 HHHDAHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHH 345
Score = 37.4 bits (85), Expect = 0.011
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = -3
Query: 170 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHH 6
H H + +H H HH +H +HH + H +H HH H H HH
Sbjct: 196 HHHHHHHAPHHHHHHHHAPHHHHHHHHGHHHHHHHHHGHHHHHHHHHGHHHHHHH 250
Score = 37.4 bits (85), Expect = 0.011
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -3
Query: 143 NHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHH 6
+H H + HH +H +HH + H H + HH H H HH
Sbjct: 261 HHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHH 306
Score = 37.0 bits (84), Expect = 0.014
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = -3
Query: 170 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHH 6
H H + ++H H HH +H HH + H H +H HH H H HH
Sbjct: 266 HHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHH-HHHDAHHHHHHHDAHHHHHH 319
Score = 37.0 bits (84), Expect = 0.014
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -3
Query: 170 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHH 6
H H + ++H H HH +H +HH + HD +H HH H HH
Sbjct: 296 HHHHHHHDAHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHH 350
Score = 36.6 bits (83), Expect = 0.018
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -3
Query: 143 NHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHH 6
+H H + HH +H +HH + H H + HH H H HH
Sbjct: 191 HHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHGHHHHHHHHHGHHH 236
Score = 36.2 bits (82), Expect = 0.024
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = -3
Query: 170 HLHRLFYISNHRLGHVFYLHHTLLYH--PFYHHLRNLHDHFVYHRHHIHPDHFVGHH 6
H H + +H H HH +H P +HH + H +H HH H H HH
Sbjct: 176 HHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHGHHHHHHHHH 232
Score = 36.2 bits (82), Expect = 0.024
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = -3
Query: 170 HLHRLFYISNHRLGHVFYLHHTLLYH--PFYHHLRNLHDHFVYHRHHIHPDHFVGHH 6
H H + +H H HH +H P +HH + H +H HH H H HH
Sbjct: 186 HHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHGHHHHHHHHHGHHHHHHHHH 242
Score = 36.2 bits (82), Expect = 0.024
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = -3
Query: 170 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHH 6
H H + ++H H HH +H HH + H +H HH H H HH
Sbjct: 256 HHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHH 310
Score = 35.8 bits (81), Expect = 0.031
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 7/60 (11%)
Frame = -3
Query: 164 HRLFYISNHRLGHVFYLHHTLLYH----PFYHHLRNLHDHFVYHRHHIH---PDHFVGHH 6
H + ++H H ++ HH L YH P +HH H H H HH H P H HH
Sbjct: 149 HHHHHAAHH---HPWFHHHHLGYHHHHAPHHHH----HHHHAPHHHHHHHHAPHHHHHHH 201
Score = 35.8 bits (81), Expect = 0.031
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = -3
Query: 170 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHH 6
H H + ++H H HH +H HH + HD +H HH H HH
Sbjct: 276 HHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHDAHHHHHHHHDAHHHHHHH 330
Score = 35.0 bits (79), Expect = 0.053
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Frame = -3
Query: 170 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHR---HHIHPDHFVGHH 6
H H + +H H + HH +H YHH H H +H HH H H HH
Sbjct: 143 HHHEEHHHHHHAAHHHPWFHH---HHLGYHHHHAPHHHHHHHHAPHHHHHHHHAPHHH 197
Score = 35.0 bits (79), Expect = 0.053
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = -3
Query: 170 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHH 6
H H +H H HH +H +HH + HD +H HH H HH
Sbjct: 247 HHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHH 301
Score = 35.0 bits (79), Expect = 0.053
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = -3
Query: 170 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHH 6
H H +H H HH +H +HH + HD +H HH H HH
Sbjct: 257 HHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHH 311
Score = 34.3 bits (77), Expect = 0.091
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = -3
Query: 170 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHH 6
H H +H H HH +H +HH + HD +H HH H HH
Sbjct: 237 HHHHHHGHHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHH 291
Score = 34.3 bits (77), Expect = 0.091
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = -3
Query: 170 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHH 6
H H +H H HH +H +HH + HD +H HH H HH
Sbjct: 267 HHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHDAHHHHHHHH 321
Score = 33.9 bits (76), Expect = 0.12
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Frame = -3
Query: 143 NHRLGHVFYLHHTLLYHPFYHHLRNLHDH-FVYHRHHIHPD---HFVGHH 6
+H H + HH H HH + H H +H HH HP H +GHH
Sbjct: 69 HHEPHHEEHHHHHPEEHHEPHHEEHHHHHPHPHHHHHHHPPHHHHHLGHH 118
Score = 33.5 bits (75), Expect = 0.16
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 6/61 (9%)
Frame = -3
Query: 170 HLHRLFYISNHRLGHVFYLHHTLLYH----PFYHHLRNLHDHFVYHRHHI--HPDHFVGH 9
H H + ++H + HH +H +HH H H +H HH+ H H H
Sbjct: 117 HHHHHHHAAHHHHHEEHHHHHHAAHHHHHEEHHHHHHAAHHHPWFHHHHLGYHHHHAPHH 176
Query: 8 H 6
H
Sbjct: 177 H 177
Score = 32.3 bits (72), Expect = 0.35
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = -3
Query: 143 NHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHH 6
+H H + HH H +HH H H + H HH H H HH
Sbjct: 85 HHEPHHEEHHHHHPHPHHHHHHHPPHHHHHLGHHHHHH--HAAHHH 128
Score = 32.3 bits (72), Expect = 0.35
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Frame = -3
Query: 164 HRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHR---HHIHPDHFVGHH 6
H + +H H + HH +H +HH + H F +H HH H H HH
Sbjct: 126 HHHHHEEHHHHHHAAHHHHHEEHH-HHHHAAHHHPWFHHHHLGYHHHHAPHHHHHH 180
Score = 29.3 bits (64), Expect = 2.9
Identities = 16/50 (32%), Positives = 19/50 (38%), Gaps = 9/50 (18%)
Frame = -3
Query: 128 HVFYLHHTLLYHPFYHHLRNLH---------DHFVYHRHHIHPDHFVGHH 6
H + HH H HH + H H +H HH HP H HH
Sbjct: 58 HEEHHHHHPEEHHEPHHEEHHHHHPEEHHEPHHEEHHHHHPHPHHHHHHH 107
Score = 28.1 bits (61), Expect = 6.5
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = -3
Query: 128 HVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHH 6
H+ HH +HP HH + +H +H H H HH
Sbjct: 56 HLHEEHHH--HHPEEHHEPHHEEHHHHHPEEHHEPHHEEHH 94
>sp|P14586|HRP3_PLAFS Histidine-rich protein
Length = 82
Score = 39.7 bits (91), Expect = 0.002
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = -3
Query: 143 NHRLGHVFYLHHTL---LYHPFYHHLRNLHDHFVYHRHHI 33
NHR H F+ HH L LYH +HH + H H +HRH I
Sbjct: 3 NHRYHHYFHRHHHLNHHLYHRHHHHRHHHHRH--HHRHQI 40
Score = 36.2 bits (82), Expect = 0.024
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -3
Query: 98 YHPFYHHLRNLHDHFVYHRHHIHPDHFVGHH 6
YH ++H +L +H +YHRHH H H HH
Sbjct: 6 YHHYFHRHHHL-NHHLYHRHHHHRHHHHRHH 35
Score = 35.4 bits (80), Expect = 0.041
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -3
Query: 164 HRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYH--RHHIH 30
H F+ +H H+++ HH H +HH R+ H H + H RH IH
Sbjct: 7 HHYFHRHHHLNHHLYHRHH----HHRHHHHRHHHRHQILHQNRHQIH 49
>sp|P40349|URB1_USTMA Siderophore biosynthesis regulatory protein URBS1
Length = 950
Score = 34.3 bits (77), Expect = 0.091
Identities = 19/50 (38%), Positives = 21/50 (42%)
Frame = -3
Query: 170 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDH 21
H R RLG V HH H +HH N H V+H HH H H
Sbjct: 735 HAARASASDGARLGSVVPHHH----HHHHHHHANHASHAVHHGHHHHHHH 780
>sp|P04196|HRG_HUMAN Histidine-rich glycoprotein precursor (Histidine-proline-rich
glycoprotein) (HPRG)
Length = 525
Score = 33.9 bits (76), Expect = 0.12
Identities = 21/60 (35%), Positives = 23/60 (38%), Gaps = 5/60 (8%)
Frame = -3
Query: 170 HLHRLFYISNHRLGHVFYLHH-----TLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHH 6
H H+ H GH + HH T HP HH H H HH H H GHH
Sbjct: 350 HPHKHHSHEQHPHGHHPHAHHPHEHDTHRQHPHGHHPHGHHP----HGHHPHGHHPHGHH 405
>sp|Q9NBW1|FRIZ4_DROME Frizzled 4 precursor (Frizzled-4) (dFz4)
Length = 705
Score = 33.9 bits (76), Expect = 0.12
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -3
Query: 149 ISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHH 6
+SN+ LG +HH + P +HH H +H HH H H H
Sbjct: 628 MSNYSLGRS--VHHQQRHSPHHHH-HQQQQHHQFHPHHNHQHHSTSSH 672
>sp|Q8FFX9|RCNA_ECOL6 Nickel/cobalt efflux system rcnA
Length = 274
Score = 31.6 bits (70), Expect = 0.59
Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = -3
Query: 77 LRNLHDHFVYHRHHIHPDHF-VGHH 6
L N+H+H H HH H DH GHH
Sbjct: 117 LENMHEHDHEHHHHDHEDHHDHGHH 141
>sp|Q64733|FOXB2_MOUSE Forkhead box protein B2 (Transcription factor FKH-4)
Length = 428
Score = 31.2 bits (69), Expect = 0.77
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -3
Query: 110 HTLLYHPFY-HHLRNLHDHFVYHRHHIHP 27
H +HP + HH + H H +H HH HP
Sbjct: 135 HLHPHHPHHAHHHHHHHHHAAHHHHHHHP 163
Score = 28.5 bits (62), Expect = 5.0
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 80 HLRNLHDHFVYHRHHIHPDHFVGHH 6
HL H H +H HH H H HH
Sbjct: 135 HLHPHHPHHAHHHHHHH--HHAAHH 157
>sp|Q9W349|LOZEN_DROME Lozenge protein
Length = 826
Score = 30.8 bits (68), Expect = 1.0
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 5/36 (13%)
Frame = -3
Query: 113 HHTLLYHPF--YHHLRNLHD---HFVYHRHHIHPDH 21
HH L+H + YHH H H +H HH HP +
Sbjct: 108 HHHHLHHHYSPYHHAHPYHPPHPHAPHHHHHHHPPY 143
Score = 29.6 bits (65), Expect = 2.2
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = -3
Query: 113 HHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHH 6
HH +H +HH H YH H H H HH
Sbjct: 107 HH---HHHLHHHYSPYHHAHPYHPPHPHAPHHHHHH 139
>sp|P23792|DISC_DROME Disconnected protein
Length = 568
Score = 30.4 bits (67), Expect = 1.3
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = -3
Query: 128 HVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHH 6
H Y HH L H + H H HH H +GHH
Sbjct: 500 HQQYNHHHQLQQ---QHQQEQHHHLTLSHHHQEQHHHLGHH 537
Score = 28.9 bits (63), Expect = 3.8
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
Frame = -3
Query: 113 HHTLLYHPF---YHHLRNLHDHFVYHRHHIHPDH 21
HH L H +HHL H H +H HH H H
Sbjct: 519 HHLTLSHHHQEQHHHLG--HHHMGHHHHHHHQHH 550
>sp|Q9WV48|SHAN1_RAT SH3 and multiple ankyrin repeat domains protein 1 (Shank1)
(GKAP/SAPAP interacting protein) (SPANK-1) (Synamon)
(Somatostatin receptor interacting protein) (SSTR
interacting protein) (SSTRIP)
Length = 2167
Score = 30.4 bits (67), Expect = 1.3
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
Frame = -3
Query: 116 LHHTLLYHPFYHHLRNLHDHFVY----HRHHIHPDH 21
L+H+ P +HH + H H H HH HP H
Sbjct: 995 LYHSAALPPAHHHPPHHHHHHAPPPQPHHHHAHPPH 1030
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,815,880
Number of Sequences: 369166
Number of extensions: 412480
Number of successful extensions: 2184
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1771
length of database: 68,354,980
effective HSP length: 74
effective length of database: 54,684,590
effective search space used: 1695222290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)