Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_006_E15
(947 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) ... 294 3e-79
sp|P25782|CYSP2_HOMAM Digestive cysteine proteinase 2 precu... 294 3e-79
sp|P43235|CATK_HUMAN Cathepsin K precursor (Cathepsin O) (C... 290 3e-78
sp|P61277|CATK_MACMU Cathepsin K precursor >gi|47117667|sp|... 290 5e-78
sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted ... 288 2e-77
sp|P06797|CATL_MOUSE Cathepsin L precursor (Major excreted ... 288 2e-77
sp|Q9GLE3|CATK_PIG Cathepsin K precursor 287 3e-77
sp|Q95029|CATL_DROME Cathepsin L precursor (Cysteine protei... 286 8e-77
sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Catheps... 286 8e-77
sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathe... 286 8e-77
>sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) (Cathepsin U)
Length = 334
Score = 294 bits (752), Expect = 3e-79
Identities = 150/288 (52%), Positives = 193/288 (67%), Gaps = 8/288 (2%)
Frame = +3
Query: 18 RKTIWIENIKYIQHHNVKYDLGHHSHSLGINEFSDLTYKEFEKLYLLSKNIEYNDGIDYL 197
R+ +W +N+K I+ HN +Y G H ++ +N F D+T +EF ++ +N ++ G +
Sbjct: 48 RRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQMMGCFRNQKFRKGKVFR 107
Query: 198 PPLNIDNLPDSVDWRTKGYVTNVKNQGQCGSCWAFSTTGSLEGQHFRKHKVLQNISEQQL 377
PL +D LP SVDWR KGYVT VKNQ QCGSCWAFS TG+LEGQ FRK L ++SEQ L
Sbjct: 108 EPLFLD-LPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNL 166
Query: 378 VDCVTK--NSGCNGGWMNIAFEYISSH-GIESEDNYPYQAKQGNCVFDKSKVVANCKGFQ 548
VDC N GCNGG+M AF+Y+ + G++SE++YPY A C + VAN GF
Sbjct: 167 VDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEICKYRPENSVANDTGFT 226
Query: 549 NINSCNEKDLAVAVATVGPISVAIDVGY-SFQQYKQGVYYEAKCDPTIQNHAVLVVGYGV 725
+ EK L AVATVGPISVA+D G+ SFQ YK G+Y+E C +H VLVVGYG
Sbjct: 227 VVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGF 286
Query: 726 E----NGHKYWLVKNSWGPSWGMNGYIKMSKDRDNNCGIATTASFPIV 857
E N KYWLVKNSWGP WG NGY+K++KD++N+CGIAT AS+P V
Sbjct: 287 EGANSNNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASYPNV 334
>sp|P25782|CYSP2_HOMAM Digestive cysteine proteinase 2 precursor
Length = 323
Score = 294 bits (752), Expect = 3e-79
Identities = 151/290 (52%), Positives = 192/290 (66%), Gaps = 6/290 (2%)
Frame = +3
Query: 6 DELIRKTIWIENIKYIQHHNVKYDLGHHSHSLGINEFSDLTYKEFEKLYLLSKNIEYNDG 185
++ R+ I+ +N KYI+ N KY+ G + +L +N+F D+T +EF + + NI
Sbjct: 36 EDSYRRVIFEQNQKYIEEFNKKYENGEVTFNLAMNKFGDMTLEEFNAV--MKGNIPRRSA 93
Query: 186 --IDYLPPLNIDNLPDSVDWRTKGYVTNVKNQGQCGSCWAFSTTGSLEGQHFRKHKVLQN 359
+ P VDWRTKG VT VK+QGQCGSCWAFSTTGSLEGQHF K L +
Sbjct: 94 PVSVFYPKKETGPQATEVDWRTKGAVTPVKDQGQCGSCWAFSTTGSLEGQHFLKTGSLIS 153
Query: 360 ISEQQLVDCVTKNS--GCNGGWMNIAFEYI-SSHGIESEDNYPYQAKQGNCVFDKSKVVA 530
++EQQLVDC GCNGGWMN AF+YI +++GI++E YPY+A+ G+C FD + V A
Sbjct: 154 LAEQQLVDCSRPYGPQGCNGGWMNDAFDYIKANNGIDTEAAYPYEARDGSCRFDSNSVAA 213
Query: 531 NCKGFQNINSCNEKDLAVAVATVGPISVAIDVGYS-FQQYKQGVYYEAKCDPTIQNHAVL 707
C G NI S +E L AV +GPISV ID +S FQ Y GVYYE C P+ +HAVL
Sbjct: 214 TCSGHTNIASGSETGLQQAVRDIGPISVTIDAAHSSFQFYSSGVYYEPSCSPSYLDHAVL 273
Query: 708 VVGYGVENGHKYWLVKNSWGPSWGMNGYIKMSKDRDNNCGIATTASFPIV 857
VGYG E G +WLVKNSW SWG GYIKMS++R+NNCGIAT AS+P+V
Sbjct: 274 AVGYGSEGGQDFWLVKNSWATSWGDAGYIKMSRNRNNNCGIATVASYPLV 323
>sp|P43235|CATK_HUMAN Cathepsin K precursor (Cathepsin O) (Cathepsin X) (Cathepsin O2)
Length = 329
Score = 290 bits (743), Expect = 3e-78
Identities = 142/288 (49%), Positives = 198/288 (68%), Gaps = 5/288 (1%)
Frame = +3
Query: 3 IDELIRKTIWIENIKYIQHHNVKYDLGHHSHSLGINEFSDLTYKEF-EKLYLLSKNIEYN 179
+DE+ R+ IW +N+KYI HN++ LG H++ L +N D+T +E +K+ L + ++
Sbjct: 41 VDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLSHS 100
Query: 180 DGID--YLPPLNIDNLPDSVDWRTKGYVTNVKNQGQCGSCWAFSTTGSLEGQHFRKHKVL 353
D Y+P PDSVD+R KGYVT VKNQGQCGSCWAFS+ G+LEGQ +K L
Sbjct: 101 RSNDTLYIPEWE-GRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKL 159
Query: 354 QNISEQQLVDCVTKNSGCNGGWMNIAFEYI-SSHGIESEDNYPYQAKQGNCVFDKSKVVA 530
N+S Q LVDCV++N GC GG+M AF+Y+ + GI+SED YPY ++ +C+++ + A
Sbjct: 160 LNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAA 219
Query: 531 NCKGFQNINSCNEKDLAVAVATVGPISVAIDVGY-SFQQYKQGVYYEAKCDPTIQNHAVL 707
C+G++ I NEK L AVA VGP+SVAID SFQ Y +GVYY+ C+ NHAVL
Sbjct: 220 KCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVL 279
Query: 708 VVGYGVENGHKYWLVKNSWGPSWGMNGYIKMSKDRDNNCGIATTASFP 851
VGYG++ G+K+W++KNSWG +WG GYI M+++++N CGIA ASFP
Sbjct: 280 AVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFP 327
>sp|P61277|CATK_MACMU Cathepsin K precursor
sp|P61276|CATK_MACFA Cathepsin K precursor
Length = 329
Score = 290 bits (741), Expect = 5e-78
Identities = 142/289 (49%), Positives = 198/289 (68%), Gaps = 6/289 (2%)
Frame = +3
Query: 3 IDELIRKTIWIENIKYIQHHNVKYDLGHHSHSLGINEFSDLTYKEFEK----LYLLSKNI 170
+DE+ R+ IW +N+KYI HN++ LG H++ L +N D+T +E + L + + +
Sbjct: 41 VDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQKMTGLKVPASHS 100
Query: 171 EYNDGIDYLPPLNIDNLPDSVDWRTKGYVTNVKNQGQCGSCWAFSTTGSLEGQHFRKHKV 350
ND + Y+P PDSVD+R KGYVT VKNQGQCGSCWAFS+ G+LEGQ +K
Sbjct: 101 RSNDTL-YIPDWE-GRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGK 158
Query: 351 LQNISEQQLVDCVTKNSGCNGGWMNIAFEYI-SSHGIESEDNYPYQAKQGNCVFDKSKVV 527
L N+S Q LVDCV++N GC GG+M AF+Y+ + GI+SED YPY ++ +C+++ +
Sbjct: 159 LLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKA 218
Query: 528 ANCKGFQNINSCNEKDLAVAVATVGPISVAIDVGY-SFQQYKQGVYYEAKCDPTIQNHAV 704
A C+G++ I NEK L AVA VGP+SVAID SFQ Y +GVYY+ C+ NHAV
Sbjct: 219 AKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAV 278
Query: 705 LVVGYGVENGHKYWLVKNSWGPSWGMNGYIKMSKDRDNNCGIATTASFP 851
L VGYG++ G+K+W++KNSWG +WG GYI M+++++N CGIA ASFP
Sbjct: 279 LAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFP 327
>sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted protein) (MEP) [Contains:
Cathepsin L heavy chain; Cathepsin L light chain]
Length = 333
Score = 288 bits (737), Expect = 2e-77
Identities = 150/288 (52%), Positives = 196/288 (68%), Gaps = 8/288 (2%)
Frame = +3
Query: 18 RKTIWIENIKYIQHHNVKYDLGHHSHSLGINEFSDLTYKEFEKLYLLSKNIEYNDGIDYL 197
R+ +W +N+K I+ HN +Y G HS ++ +N F D+T +EF ++ +N + G +
Sbjct: 48 RRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQ 107
Query: 198 PPLNIDNLPDSVDWRTKGYVTNVKNQGQCGSCWAFSTTGSLEGQHFRKHKVLQNISEQQL 377
PL + P SVDWR KGYVT VKNQGQCGSCWAFS TG+LEGQ FRK L ++SEQ L
Sbjct: 108 EPLFYE-APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNL 166
Query: 378 VDC--VTKNSGCNGGWMNIAFEYISSH-GIESEDNYPYQAKQGNCVFDKSKVVANCKGFQ 548
VDC N GCNGG M+ AF+Y+ + G++SE++YPY+A + +C ++ VAN GF
Sbjct: 167 VDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFV 226
Query: 549 NINSCNEKDLAVAVATVGPISVAIDVGY-SFQQYKQGVYYEAKCDPTIQNHAVLVVGYGV 725
+I EK L AVATVGPISVAID G+ SF YK+G+Y+E C +H VLVVGYG
Sbjct: 227 DIPK-QEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGF 285
Query: 726 E----NGHKYWLVKNSWGPSWGMNGYIKMSKDRDNNCGIATTASFPIV 857
E + +KYWLVKNSWG WGM GY+KM+KDR N+CGIA+ AS+P V
Sbjct: 286 ESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 333
>sp|P06797|CATL_MOUSE Cathepsin L precursor (Major excreted protein) (MEP) (p39 cysteine
proteinase) [Contains: Cathepsin L heavy chain;
Cathepsin L light chain]
Length = 334
Score = 288 bits (736), Expect = 2e-77
Identities = 150/292 (51%), Positives = 195/292 (66%), Gaps = 8/292 (2%)
Frame = +3
Query: 6 DELIRKTIWIENIKYIQHHNVKYDLGHHSHSLGINEFSDLTYKEFEKLYLLSKNIEYNDG 185
+E R+ IW +N++ IQ HN +Y G H S+ +N F D+T +EF ++ ++ ++ G
Sbjct: 44 EEEWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDMTNEEFRQVVNGYRHQKHKKG 103
Query: 186 IDYLPPLNIDNLPDSVDWRTKGYVTNVKNQGQCGSCWAFSTTGSLEGQHFRKHKVLQNIS 365
+ PL + +P SVDWR KG VT VKNQGQCGSCWAFS +G LEGQ F K L ++S
Sbjct: 104 RLFQEPLML-KIPKSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLS 162
Query: 366 EQQLVDC--VTKNSGCNGGWMNIAFEYISSH-GIESEDNYPYQAKQGNCVFDKSKVVANC 536
EQ LVDC N GCNGG M+ AF+YI + G++SE++YPY+AK G+C + VAN
Sbjct: 163 EQNLVDCSHAQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEFAVAND 222
Query: 537 KGFQNINSCNEKDLAVAVATVGPISVAIDVGY-SFQQYKQGVYYEAKCDPTIQNHAVLVV 713
GF +I EK L AVATVGPISVA+D + S Q Y G+YYE C +H VL+V
Sbjct: 223 TGFVDIPQ-QEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKNLDHGVLLV 281
Query: 714 GYGVE----NGHKYWLVKNSWGPSWGMNGYIKMSKDRDNNCGIATTASFPIV 857
GYG E N +KYWLVKNSWG WGM GYIK++KDRDN+CG+AT AS+P+V
Sbjct: 282 GYGYEGTDSNKNKYWLVKNSWGSEWGMEGYIKIAKDRDNHCGLATAASYPVV 333
>sp|Q9GLE3|CATK_PIG Cathepsin K precursor
Length = 330
Score = 287 bits (734), Expect = 3e-77
Identities = 141/289 (48%), Positives = 195/289 (67%), Gaps = 6/289 (2%)
Frame = +3
Query: 3 IDELIRKTIWIENIKYIQHHNVKYDLGHHSHSLGINEFSDLTYKEFEK----LYLLSKNI 170
+DE+ R+ IW +N+K+I HN++ LG H++ L +N D+T +E + L + +
Sbjct: 42 VDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSHS 101
Query: 171 EYNDGIDYLPPLNIDNLPDSVDWRTKGYVTNVKNQGQCGSCWAFSTTGSLEGQHFRKHKV 350
ND + Y+P PDS+D+R KGYVT VKNQGQCGSCWAFS+ G+LEGQ +K
Sbjct: 102 RSNDTL-YIPDWE-GRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGK 159
Query: 351 LQNISEQQLVDCVTKNSGCNGGWMNIAFEYI-SSHGIESEDNYPYQAKQGNCVFDKSKVV 527
L N+S Q LVDCV++N GC GG+M AF+Y+ + GI+SED YPY + NC+++ +
Sbjct: 160 LLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDENCMYNPTGKA 219
Query: 528 ANCKGFQNINSCNEKDLAVAVATVGPISVAIDVGY-SFQQYKQGVYYEAKCDPTIQNHAV 704
A C+G++ I NEK L AVA VGP+SVAID SFQ Y +GVYY+ C+ NHAV
Sbjct: 220 AKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCNSDNLNHAV 279
Query: 705 LVVGYGVENGHKYWLVKNSWGPSWGMNGYIKMSKDRDNNCGIATTASFP 851
L VGYG++ G K+W++KNSWG +WG GYI M+++++N CGIA ASFP
Sbjct: 280 LAVGYGIQKGKKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFP 328
>sp|Q95029|CATL_DROME Cathepsin L precursor (Cysteine proteinase 1) [Contains: Cathepsin
L heavy chain; Cathepsin L light chain]
Length = 341
Score = 286 bits (731), Expect = 8e-77
Identities = 151/298 (50%), Positives = 202/298 (67%), Gaps = 14/298 (4%)
Frame = +3
Query: 6 DELIRKTIWIENIKYIQHHNVKYDLGHHSHSLGINEFSDLTYKEFEKL-----YLLSKNI 170
+E R I+ EN I HN ++ G S L +N+++DL + EF +L Y L K +
Sbjct: 45 EERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLHHEFRQLMNGFNYTLHKQL 104
Query: 171 EYND----GIDYLPPLNIDNLPDSVDWRTKGYVTNVKNQGQCGSCWAFSTTGSLEGQHFR 338
D G+ ++ P ++ LP SVDWRTKG VT VK+QG CGSCWAFS+TG+LEGQHFR
Sbjct: 105 RAADESFKGVTFISPAHV-TLPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFR 163
Query: 339 KHKVLQNISEQQLVDCVTK--NSGCNGGWMNIAFEYISSH-GIESEDNYPYQAKQGNCVF 509
K VL ++SEQ LVDC TK N+GCNGG M+ AF YI + GI++E +YPY+A +C F
Sbjct: 164 KSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEAIDDSCHF 223
Query: 510 DKSKVVANCKGFQNINSCNEKDLAVAVATVGPISVAIDVGY-SFQQYKQGVYYEAKCDPT 686
+K V A +GF +I +EK +A AVATVGP+SVAID + SFQ Y +GVY E +CD
Sbjct: 224 NKGTVGATDRGFTDIPQGDEKKMAEAVATVGPVSVAIDASHESFQFYSEGVYNEPQCDAQ 283
Query: 687 IQNHAVLVVGYGV-ENGHKYWLVKNSWGPSWGMNGYIKMSKDRDNNCGIATTASFPIV 857
+H VLVVG+G E+G YWLVKNSWG +WG G+IKM ++++N CGIA+ +S+P+V
Sbjct: 284 NLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDKGFIKMLRNKENQCGIASASSYPLV 341
>sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 286 bits (731), Expect = 8e-77
Identities = 147/289 (50%), Positives = 195/289 (67%), Gaps = 9/289 (3%)
Frame = +3
Query: 18 RKTIWIENIKYIQHHNVKYDLGHHSHSLGINEFSDLTYKEFEKLYLLSKNIEYNDGIDYL 197
R+ +W +N+K I+ HN +Y G H S+ +N F D+T +EF ++ +N ++ G +
Sbjct: 48 RRAVWEKNMKMIELHNQEYSQGKHGFSMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKVFH 107
Query: 198 PPLNIDNLPDSVDWRTKGYVTNVKNQGQCGSCWAFSTTGSLEGQHFRKHKVLQNISEQQL 377
L ++ +P SVDWR KGYVT VKNQGQCGSCWAFS TG+LEGQ FRK L ++SEQ L
Sbjct: 108 ESLVLE-VPKSVDWREKGYVTAVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNL 166
Query: 378 VDCVTK--NSGCNGGWMNIAFEYISSH-GIESEDNYPYQAKQGN-CVFDKSKVVANCKGF 545
VDC N GCNGG M+ AF+Y+ + G+++E++YPY ++ N C + AN GF
Sbjct: 167 VDCSRPQGNQGCNGGLMDNAFQYVKDNGGLDTEESYPYLGRETNSCTYKPECSAANDTGF 226
Query: 546 QNINSCNEKDLAVAVATVGPISVAIDVGY-SFQQYKQGVYYEAKCDPTIQNHAVLVVGYG 722
+I EK L AVATVGPISVAID G+ SFQ YK G+YY+ C +H VLVVGYG
Sbjct: 227 VDIPQ-REKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVLVVGYG 285
Query: 723 VE----NGHKYWLVKNSWGPSWGMNGYIKMSKDRDNNCGIATTASFPIV 857
E N K+W+VKNSWGP WG NGY+KM+KD++N+CGI+T AS+P V
Sbjct: 286 FEGTDSNSSKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGISTAASYPTV 334
>sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 286 bits (731), Expect = 8e-77
Identities = 152/293 (51%), Positives = 195/293 (66%), Gaps = 9/293 (3%)
Frame = +3
Query: 6 DELIRKTIWIENIKYIQHHNVKYDLGHHSHSLGINEFSDLTYKEFEKLYLLSKNIEYNDG 185
+E R+ +W +N K I HN +Y G H+ + +N F D+T +EF ++ +N ++ G
Sbjct: 44 EEEWRRAVWEKNKKIIDLHNQEYSEGKHAFRMAMNAFGDMTNEEFRQVMNGFQNQKHKKG 103
Query: 186 IDYLPPLNIDNLPDSVDWRTKGYVTNVKNQGQCGSCWAFSTTGSLEGQHFRKHKVLQNIS 365
+ PL +D +P SVDW KGYVT VKNQGQCGSCWAFS TG+LEGQ FRK L ++S
Sbjct: 104 KLFHEPLLVD-VPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLS 162
Query: 366 EQQLVDC--VTKNSGCNGGWMNIAFEYISSH-GIESEDNYPYQAKQGN-CVFDKSKVVAN 533
EQ LVDC N GCNGG M+ AF+YI + G++SE++YPY A N C + AN
Sbjct: 163 EQNLVDCSRAQGNQGCNGGLMDNAFQYIKDNGGLDSEESYPYLATDTNSCNYKPECSAAN 222
Query: 534 CKGFQNINSCNEKDLAVAVATVGPISVAIDVGY-SFQQYKQGVYYEAKCDPTIQNHAVLV 710
GF +I EK L AVATVGPISVAID G+ SFQ YK G+YY+ C +H VLV
Sbjct: 223 DTGFVDIPQ-REKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSCKDLDHGVLV 281
Query: 711 VGYGVE----NGHKYWLVKNSWGPSWGMNGYIKMSKDRDNNCGIATTASFPIV 857
VGYG E N +K+W+VKNSWGP WG NGY+KM+KD++N+CGIAT AS+P V
Sbjct: 282 VGYGFEGTDSNNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAASYPTV 334
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,526,321
Number of Sequences: 369166
Number of extensions: 2351816
Number of successful extensions: 6861
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6207
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9846996650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)