Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_006_D19
(965 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P33198|IDHP_PIG Isocitrate dehydrogenase [NADP], mitocho... 470 e-132
sp|P48735|IDHP_HUMAN Isocitrate dehydrogenase [NADP], mitoc... 466 e-131
sp|Q04467|IDHP_BOVIN Isocitrate dehydrogenase [NADP], mitoc... 463 e-130
sp|P54071|IDHP_MOUSE Isocitrate dehydrogenase [NADP], mitoc... 455 e-127
sp|O75874|IDHC_HUMAN Isocitrate dehydrogenase [NADP] cytopl... 441 e-123
sp|Q9Z2K9|IDHC_MICME Isocitrate dehydrogenase [NADP] cytopl... 441 e-123
sp|P41562|IDHC_RAT Isocitrate dehydrogenase [NADP] cytoplas... 440 e-123
sp|Q9Z2K8|IDHC_MICOH Isocitrate dehydrogenase [NADP] cytopl... 440 e-123
sp|Q40345|IDHP_MEDSA Isocitrate dehydrogenase [NADP], chlor... 436 e-122
sp|Q06197|IDHC_SOYBN Isocitrate dehydrogenase [NADP] (Oxalo... 434 e-121
>sp|P33198|IDHP_PIG Isocitrate dehydrogenase [NADP], mitochondrial precursor
(Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific
ICDH) (IDP) (ICD-M)
Length = 421
Score = 470 bits (1209), Expect = e-132
Identities = 222/294 (75%), Positives = 250/294 (85%)
Frame = +1
Query: 82 YSIQRIVVTNPVVELDGDEMTRIIWEKIKDRLVFPYVKVDCKYYDLGLPHRDNTNDQVTI 261
Y+ QRI V PVVE+DGDEMTRIIW+ IK++L+ P+V V KY+DLGLP+RD TNDQVTI
Sbjct: 8 YADQRIKVAKPVVEMDGDEMTRIIWQFIKEKLILPHVDVQLKYFDLGLPNRDQTNDQVTI 67
Query: 262 DSAEAILKYNVGIKCATITPDEERVKEFKLKKMWLSPNGTIRNILGGTVFREPIICKTIP 441
DSA A KY+V +KCATITPDE RV+EFKLKKMW SPNGTIRNILGGTVFREPIICK IP
Sbjct: 68 DSALATQKYSVAVKCATITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIP 127
Query: 442 RLVEGWKEAIIIGRHAHGDQYKATDYVATKPGKLELVFTPSDNSAADRMTVFEFKKRGGV 621
RLV GW + I IGRHAHGDQYKATD+V + G ++VFTP D S+A + V+ F GGV
Sbjct: 128 RLVPGWTKPITIGRHAHGDQYKATDFVVDRAGTFKIVFTPKDGSSAKQWEVYNF-PAGGV 186
Query: 622 GLAMYNTDESIEGFAHSCFQYALNKKWPLYMSTKNTILKRYDGRFKDIFQEIYDRQYKAE 801
G+ MYNTDESI GFAHSCFQYA+ KKWPLYMSTKNTILK YDGRFKDIFQEI+++ YK +
Sbjct: 187 GMGMYNTDESISGFAHSCFQYAIQKKWPLYMSTKNTILKAYDGRFKDIFQEIFEKHYKTD 246
Query: 802 FDKLKIWYEHRLIDDMVAQALKSSGGFVWGCKNYDGDVQSDIVAQGYGSLGLMT 963
FDK KIWYEHRLIDDMVAQ LKSSGGFVW CKNYDGDVQSDI+AQG+GSLGLMT
Sbjct: 247 FDKYKIWYEHRLIDDMVAQVLKSSGGFVWACKNYDGDVQSDILAQGFGSLGLMT 300
>sp|P48735|IDHP_HUMAN Isocitrate dehydrogenase [NADP], mitochondrial precursor
(Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific
ICDH) (IDP) (ICD-M)
Length = 452
Score = 466 bits (1199), Expect = e-131
Identities = 220/294 (74%), Positives = 248/294 (84%)
Frame = +1
Query: 82 YSIQRIVVTNPVVELDGDEMTRIIWEKIKDRLVFPYVKVDCKYYDLGLPHRDNTNDQVTI 261
Y+ +RI V PVVE+DGDEMTRIIW+ IK++L+ P+V + KY+DLGLP+RD T+DQVTI
Sbjct: 39 YADKRIKVAKPVVEMDGDEMTRIIWQFIKEKLILPHVDIQLKYFDLGLPNRDQTDDQVTI 98
Query: 262 DSAEAILKYNVGIKCATITPDEERVKEFKLKKMWLSPNGTIRNILGGTVFREPIICKTIP 441
DSA A KY+V +KCATITPDE RV+EFKLKKMW SPNGTIRNILGGTVFREPIICK IP
Sbjct: 99 DSALATQKYSVAVKCATITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIP 158
Query: 442 RLVEGWKEAIIIGRHAHGDQYKATDYVATKPGKLELVFTPSDNSAADRMTVFEFKKRGGV 621
RLV GW + I IGRHAHGDQYKATD+VA + G ++VFTP D S V+ F GGV
Sbjct: 159 RLVPGWTKPITIGRHAHGDQYKATDFVADRAGTFKMVFTPKDGSGVKEWEVYNF-PAGGV 217
Query: 622 GLAMYNTDESIEGFAHSCFQYALNKKWPLYMSTKNTILKRYDGRFKDIFQEIYDRQYKAE 801
G+ MYNTDESI GFAHSCFQYA+ KKWPLYMSTKNTILK YDGRFKDIFQEI+D+ YK +
Sbjct: 218 GMGMYNTDESISGFAHSCFQYAIQKKWPLYMSTKNTILKAYDGRFKDIFQEIFDKHYKTD 277
Query: 802 FDKLKIWYEHRLIDDMVAQALKSSGGFVWGCKNYDGDVQSDIVAQGYGSLGLMT 963
FDK KIWYEHRLIDDMVAQ LKSSGGFVW CKNYDGDVQSDI+AQG+GSLGLMT
Sbjct: 278 FDKNKIWYEHRLIDDMVAQVLKSSGGFVWACKNYDGDVQSDILAQGFGSLGLMT 331
>sp|Q04467|IDHP_BOVIN Isocitrate dehydrogenase [NADP], mitochondrial precursor
(Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific
ICDH) (IDP) (ICD-M)
Length = 452
Score = 463 bits (1192), Expect = e-130
Identities = 220/294 (74%), Positives = 246/294 (83%)
Frame = +1
Query: 82 YSIQRIVVTNPVVELDGDEMTRIIWEKIKDRLVFPYVKVDCKYYDLGLPHRDNTNDQVTI 261
Y+ +RI V PVVE+DGDEMTRIIW+ IK++L+ P+V V KY+DLGLP+RD TNDQVTI
Sbjct: 39 YADKRIKVAKPVVEMDGDEMTRIIWQFIKEKLILPHVDVQLKYFDLGLPNRDQTNDQVTI 98
Query: 262 DSAEAILKYNVGIKCATITPDEERVKEFKLKKMWLSPNGTIRNILGGTVFREPIICKTIP 441
DSA A KY+V +KCATITPDE RV+EFKLKKMW SPNGTIRNILGGTVFREPIICK IP
Sbjct: 99 DSALATQKYSVAVKCATITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIP 158
Query: 442 RLVEGWKEAIIIGRHAHGDQYKATDYVATKPGKLELVFTPSDNSAADRMTVFEFKKRGGV 621
RLV GW + I IGRHAHGDQYKATD+V + G ++VFTP D S V+ F GGV
Sbjct: 159 RLVPGWTKPITIGRHAHGDQYKATDFVVDRAGTFKVVFTPKDGSGPKEWEVYNF-PAGGV 217
Query: 622 GLAMYNTDESIEGFAHSCFQYALNKKWPLYMSTKNTILKRYDGRFKDIFQEIYDRQYKAE 801
G+ MYNTDESI GFAHSCFQYA+ KKWPLYMSTKNTILK YDGRFKDIFQ I+++ YK E
Sbjct: 218 GMGMYNTDESISGFAHSCFQYAIQKKWPLYMSTKNTILKAYDGRFKDIFQAIFEKHYKTE 277
Query: 802 FDKLKIWYEHRLIDDMVAQALKSSGGFVWGCKNYDGDVQSDIVAQGYGSLGLMT 963
FDK KIWYEHRLIDDMVAQ LKSSGGFVW CKNYDGDVQSDI+AQG+GSLGLMT
Sbjct: 278 FDKHKIWYEHRLIDDMVAQVLKSSGGFVWACKNYDGDVQSDILAQGFGSLGLMT 331
>sp|P54071|IDHP_MOUSE Isocitrate dehydrogenase [NADP], mitochondrial precursor
(Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific
ICDH) (IDP) (ICD-M)
Length = 523
Score = 455 bits (1170), Expect = e-127
Identities = 215/294 (73%), Positives = 246/294 (83%)
Frame = +1
Query: 82 YSIQRIVVTNPVVELDGDEMTRIIWEKIKDRLVFPYVKVDCKYYDLGLPHRDNTNDQVTI 261
Y+ +RI V PVVE+DGDEMTRIIW+ IK++L+ P+V V KY+DLGLP+RD TNDQVTI
Sbjct: 111 YAEKRIKVEKPVVEMDGDEMTRIIWQFIKEKLILPHVDVQLKYFDLGLPNRDQTNDQVTI 170
Query: 262 DSAEAILKYNVGIKCATITPDEERVKEFKLKKMWLSPNGTIRNILGGTVFREPIICKTIP 441
DSA A KY++ +KCATITPDE RV+EFKLKKMW SPNGTIRNILGGTVFREP ICK IP
Sbjct: 171 DSALAAQKYSMAVKCATITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPSICKNIP 230
Query: 442 RLVEGWKEAIIIGRHAHGDQYKATDYVATKPGKLELVFTPSDNSAADRMTVFEFKKRGGV 621
RLV GW + I IGRHAHGDQYKATD+V + G +LVFTP + S+A V+ F GGV
Sbjct: 231 RLVPGWTKPITIGRHAHGDQYKATDFVVDRAGTFKLVFTPKNGSSAKEWEVYNF-PGGGV 289
Query: 622 GLAMYNTDESIEGFAHSCFQYALNKKWPLYMSTKNTILKRYDGRFKDIFQEIYDRQYKAE 801
G+ MYNTDESI GFAHSCFQY++ KKWPLY+STKNTILK YDGRFKDIFQEI+D+ YK +
Sbjct: 290 GMGMYNTDESISGFAHSCFQYSIQKKWPLYLSTKNTILKAYDGRFKDIFQEIFDKHYKTD 349
Query: 802 FDKLKIWYEHRLIDDMVAQALKSSGGFVWGCKNYDGDVQSDIVAQGYGSLGLMT 963
FD+ KIWYEHRLIDDMVAQ LKSSGGFVW CKNYDGDVQSDI+A +GSLGLMT
Sbjct: 350 FDRNKIWYEHRLIDDMVAQVLKSSGGFVWACKNYDGDVQSDILASRFGSLGLMT 403
>sp|O75874|IDHC_HUMAN Isocitrate dehydrogenase [NADP] cytoplasmic (Oxalosuccinate
decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP)
Length = 414
Score = 441 bits (1134), Expect = e-123
Identities = 206/283 (72%), Positives = 242/283 (85%)
Frame = +1
Query: 115 VVELDGDEMTRIIWEKIKDRLVFPYVKVDCKYYDLGLPHRDNTNDQVTIDSAEAILKYNV 294
VVE+ GDEMTRIIWE IK++L+FPYV++D YDLG+ +RD TNDQVT D+AEAI K+NV
Sbjct: 10 VVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKHNV 69
Query: 295 GIKCATITPDEERVKEFKLKKMWLSPNGTIRNILGGTVFREPIICKTIPRLVEGWKEAII 474
G+KCATITPDE+RV+EFKLK+MW SPNGTIRNILGGTVFRE IICK IPRLV GW + II
Sbjct: 70 GVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVSGWVKPII 129
Query: 475 IGRHAHGDQYKATDYVATKPGKLELVFTPSDNSAADRMTVFEFKKRGGVGLAMYNTDESI 654
IGRHA+GDQY+ATD+V PGK+E+ +TPSD + V F++ GGV + MYN D+SI
Sbjct: 130 IGRHAYGDQYRATDFVVPGPGKVEITYTPSDGTQKVTYLVHNFEEGGGVAMGMYNQDKSI 189
Query: 655 EGFAHSCFQYALNKKWPLYMSTKNTILKRYDGRFKDIFQEIYDRQYKAEFDKLKIWYEHR 834
E FAHS FQ AL+K WPLY+STKNTILK+YDGRFKDIFQEIYD+QYK++F+ KIWYEHR
Sbjct: 190 EDFAHSSFQMALSKGWPLYLSTKNTILKKYDGRFKDIFQEIYDKQYKSQFEAQKIWYEHR 249
Query: 835 LIDDMVAQALKSSGGFVWGCKNYDGDVQSDIVAQGYGSLGLMT 963
LIDDMVAQA+KS GGF+W CKNYDGDVQSD VAQGYGSLG+MT
Sbjct: 250 LIDDMVAQAMKSEGGFIWACKNYDGDVQSDSVAQGYGSLGMMT 292
>sp|Q9Z2K9|IDHC_MICME Isocitrate dehydrogenase [NADP] cytoplasmic (Oxalosuccinate
decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP)
Length = 414
Score = 441 bits (1134), Expect = e-123
Identities = 207/283 (73%), Positives = 240/283 (84%)
Frame = +1
Query: 115 VVELDGDEMTRIIWEKIKDRLVFPYVKVDCKYYDLGLPHRDNTNDQVTIDSAEAILKYNV 294
VVE+ GDEMTRIIWE IK++L+ PYV++D YDLG+ +RD TNDQVT D+AEAI KYNV
Sbjct: 10 VVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNV 69
Query: 295 GIKCATITPDEERVKEFKLKKMWLSPNGTIRNILGGTVFREPIICKTIPRLVEGWKEAII 474
G+KCATITPDE+RV+EFKLK+MW SPNGTIRNILGGTVFRE IICK IPRLV GW + II
Sbjct: 70 GVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPII 129
Query: 475 IGRHAHGDQYKATDYVATKPGKLELVFTPSDNSAADRMTVFEFKKRGGVGLAMYNTDESI 654
IGRHA+GDQY+ATD+V PGK+E+ FTP D S V F++ GGV + MYN D+SI
Sbjct: 130 IGRHAYGDQYRATDFVVPGPGKVEITFTPKDGSQKVTYLVHSFEEGGGVAMGMYNQDKSI 189
Query: 655 EGFAHSCFQYALNKKWPLYMSTKNTILKRYDGRFKDIFQEIYDRQYKAEFDKLKIWYEHR 834
E FAHS FQ AL+K WPLY+STKNTILK+YDGRFKDIFQEIYD+QYK++F+ KIWYEHR
Sbjct: 190 EDFAHSSFQMALSKGWPLYLSTKNTILKKYDGRFKDIFQEIYDKQYKSQFEAQKIWYEHR 249
Query: 835 LIDDMVAQALKSSGGFVWGCKNYDGDVQSDIVAQGYGSLGLMT 963
LIDDMVAQA+KS GGF+W CKNYDGDVQSD VAQGYGSLG+MT
Sbjct: 250 LIDDMVAQAMKSEGGFIWACKNYDGDVQSDSVAQGYGSLGMMT 292
>sp|P41562|IDHC_RAT Isocitrate dehydrogenase [NADP] cytoplasmic (Oxalosuccinate
decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP)
Length = 414
Score = 440 bits (1132), Expect = e-123
Identities = 206/283 (72%), Positives = 241/283 (85%)
Frame = +1
Query: 115 VVELDGDEMTRIIWEKIKDRLVFPYVKVDCKYYDLGLPHRDNTNDQVTIDSAEAILKYNV 294
VVE+ GDEMTRIIWE IK++L+ PYV++D YDLG+ +RD TNDQVT D+AEAI KYNV
Sbjct: 10 VVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNV 69
Query: 295 GIKCATITPDEERVKEFKLKKMWLSPNGTIRNILGGTVFREPIICKTIPRLVEGWKEAII 474
G+KCATITPDE+RV+EFKLK+MW SPNGTIRNILGGTVFRE IICK IPRLV GW + II
Sbjct: 70 GVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPII 129
Query: 475 IGRHAHGDQYKATDYVATKPGKLELVFTPSDNSAADRMTVFEFKKRGGVGLAMYNTDESI 654
IGRHA+GDQY+ATD+V PGK+E+ +TP D S V +F++ GGV + MYN D+SI
Sbjct: 130 IGRHAYGDQYRATDFVVPGPGKVEITYTPKDGSQKVTYLVHDFEEGGGVAMGMYNQDKSI 189
Query: 655 EGFAHSCFQYALNKKWPLYMSTKNTILKRYDGRFKDIFQEIYDRQYKAEFDKLKIWYEHR 834
E FAHS FQ AL+K WPLY+STKNTILK+YDGRFKDIFQEIYD+QYK++F+ KIWYEHR
Sbjct: 190 EDFAHSSFQMALSKGWPLYLSTKNTILKKYDGRFKDIFQEIYDKQYKSKFEAQKIWYEHR 249
Query: 835 LIDDMVAQALKSSGGFVWGCKNYDGDVQSDIVAQGYGSLGLMT 963
LIDDMVAQA+KS GGF+W CKNYDGDVQSD VAQGYGSLG+MT
Sbjct: 250 LIDDMVAQAMKSEGGFIWACKNYDGDVQSDSVAQGYGSLGMMT 292
>sp|Q9Z2K8|IDHC_MICOH Isocitrate dehydrogenase [NADP] cytoplasmic (Oxalosuccinate
decarboxylase) (IDH) (NADP(+)-specific ICDH) (IDP)
Length = 414
Score = 440 bits (1131), Expect = e-123
Identities = 206/283 (72%), Positives = 240/283 (84%)
Frame = +1
Query: 115 VVELDGDEMTRIIWEKIKDRLVFPYVKVDCKYYDLGLPHRDNTNDQVTIDSAEAILKYNV 294
VVE+ GDEMTRIIWE IK++L+ PYV++D YDLG+ +RD TNDQVT D+AEAI KYNV
Sbjct: 10 VVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNV 69
Query: 295 GIKCATITPDEERVKEFKLKKMWLSPNGTIRNILGGTVFREPIICKTIPRLVEGWKEAII 474
G+KCATITPDE+RV+EFKLK+MW SPNGTIRNILGGTVFRE IICK IPRLV GW + II
Sbjct: 70 GVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPII 129
Query: 475 IGRHAHGDQYKATDYVATKPGKLELVFTPSDNSAADRMTVFEFKKRGGVGLAMYNTDESI 654
IGRHA+GDQY+ATD+V PGK+E+ +TP D S V F++ GGV + MYN D+SI
Sbjct: 130 IGRHAYGDQYRATDFVVPGPGKVEITYTPKDGSQKVTYLVHSFEEGGGVAMGMYNQDKSI 189
Query: 655 EGFAHSCFQYALNKKWPLYMSTKNTILKRYDGRFKDIFQEIYDRQYKAEFDKLKIWYEHR 834
E FAHS FQ AL+K WPLY+STKNTILK+YDGRFKDIFQEIYD+QYK++F+ KIWYEHR
Sbjct: 190 EDFAHSSFQMALSKGWPLYLSTKNTILKKYDGRFKDIFQEIYDKQYKSQFEAQKIWYEHR 249
Query: 835 LIDDMVAQALKSSGGFVWGCKNYDGDVQSDIVAQGYGSLGLMT 963
LIDDMVAQA+KS GGF+W CKNYDGDVQSD VAQGYGSLG+MT
Sbjct: 250 LIDDMVAQAMKSEGGFIWACKNYDGDVQSDSVAQGYGSLGMMT 292
>sp|Q40345|IDHP_MEDSA Isocitrate dehydrogenase [NADP], chloroplast precursor
(Oxalosuccinate decarboxylase) (IDH) (NADP(+)-specific
ICDH) (IDP)
Length = 433
Score = 436 bits (1121), Expect = e-122
Identities = 204/291 (70%), Positives = 237/291 (81%)
Frame = +1
Query: 91 QRIVVTNPVVELDGDEMTRIIWEKIKDRLVFPYVKVDCKYYDLGLPHRDNTNDQVTIDSA 270
Q+I V NP+VE+DGDEMTRIIW+ IKD+L+FP+V++D KY+DLGLP+RD TND+VT++SA
Sbjct: 25 QKIKVANPIVEMDGDEMTRIIWKYIKDKLIFPFVELDIKYFDLGLPYRDETNDKVTVESA 84
Query: 271 EAILKYNVGIKCATITPDEERVKEFKLKKMWLSPNGTIRNILGGTVFREPIICKTIPRLV 450
EA LKYNV IKCATITPDE RVKEF LK MW SPNGTIRNIL GTVFREPIICK IPRL+
Sbjct: 85 EATLKYNVAIKCATITPDEARVKEFGLKSMWRSPNGTIRNILNGTVFREPIICKNIPRLI 144
Query: 451 EGWKEAIIIGRHAHGDQYKATDYVATKPGKLELVFTPSDNSAADRMTVFEFKKRGGVGLA 630
GW + I IGRHA GDQY+ATD V PGKL+LVF P + V+ F GGV LA
Sbjct: 145 PGWTKPICIGRHAFGDQYRATDSVIKGPGKLKLVFVPEGQGETTDLEVYNFTGEGGVALA 204
Query: 631 MYNTDESIEGFAHSCFQYALNKKWPLYMSTKNTILKRYDGRFKDIFQEIYDRQYKAEFDK 810
MYNTDESI FA + AL KKWPLY+STKNTILK+YDGRFKDIFQE+Y+ +K++++
Sbjct: 205 MYNTDESIRSFAEASMAVALEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEAGWKSKYEA 264
Query: 811 LKIWYEHRLIDDMVAQALKSSGGFVWGCKNYDGDVQSDIVAQGYGSLGLMT 963
IWYEHRLIDDMVA ALKS GG+VW CKNYDGDVQSD +AQG+GSLGLMT
Sbjct: 265 AGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMT 315
>sp|Q06197|IDHC_SOYBN Isocitrate dehydrogenase [NADP] (Oxalosuccinate decarboxylase)
(IDH) (NADP(+)-specific ICDH) (IDP)
Length = 413
Score = 434 bits (1116), Expect = e-121
Identities = 204/293 (69%), Positives = 236/293 (80%)
Frame = +1
Query: 85 SIQRIVVTNPVVELDGDEMTRIIWEKIKDRLVFPYVKVDCKYYDLGLPHRDNTNDQVTID 264
+ Q+I V NP+VE+DGDEMTR+IW+ IKD+L+ P++++D KYYDLGLP+RD T+D+VTI+
Sbjct: 3 AFQKIKVANPIVEMDGDEMTRVIWKSIKDKLILPFLELDIKYYDLGLPYRDETDDKVTIE 62
Query: 265 SAEAILKYNVGIKCATITPDEERVKEFKLKKMWLSPNGTIRNILGGTVFREPIICKTIPR 444
SAEA LKYNV IKCATITPDE RVKEF LK MW SPNGTIRNIL GTVFREPI+CK IPR
Sbjct: 63 SAEATLKYNVAIKCATITPDEARVKEFGLKSMWKSPNGTIRNILNGTVFREPILCKNIPR 122
Query: 445 LVEGWKEAIIIGRHAHGDQYKATDYVATKPGKLELVFTPSDNSAADRMTVFEFKKRGGVG 624
LV GW +AI IGRHA GDQY+ATD V GKL+LVF P VF F GGV
Sbjct: 123 LVPGWTKAICIGRHAFGDQYRATDTVIKGAGKLKLVFVPEGQGEETEFEVFNFTGEGGVS 182
Query: 625 LAMYNTDESIEGFAHSCFQYALNKKWPLYMSTKNTILKRYDGRFKDIFQEIYDRQYKAEF 804
LAMYNTDESI FA + AL KKWPLY+STKNTILK+YDGRFKDIFQE+Y+ +K++F
Sbjct: 183 LAMYNTDESIRSFAEASMATALEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEASWKSKF 242
Query: 805 DKLKIWYEHRLIDDMVAQALKSSGGFVWGCKNYDGDVQSDIVAQGYGSLGLMT 963
+ IWYEHRLIDDMVA ALKS GG+VW CKNYDGDVQSD +AQG+GSLGLMT
Sbjct: 243 EAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMT 295
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 118,338,484
Number of Sequences: 369166
Number of extensions: 2535150
Number of successful extensions: 6636
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6618
length of database: 68,354,980
effective HSP length: 111
effective length of database: 47,849,395
effective search space used: 10048372950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)