Planarian EST Database


Dr_sW_006_C02

BLASTX 2.2.12 [Aug-07-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dr_sW_006_C02
         (861 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q90705|EF2_CHICK  Elongation factor 2 (EF-2)                   424   e-118
sp|P13639|EF2_HUMAN  Elongation factor 2 (EF-2)                   422   e-118
sp|P58252|EF2_MOUSE  Elongation factor 2 (EF-2)                   421   e-117
sp|P05086|EF2_MESAU  Elongation factor 2 (EF-2)                   421   e-117
sp|P05197|EF2_RAT  Elongation factor 2 (EF-2)                     421   e-117
sp|P09445|EF2_CRIGR  Elongation factor 2 (EF-2)                   414   e-115
sp|P29691|EF2_CAEEL  Elongation factor 2 (EF-2)                   411   e-114
sp|P13060|EF2_DROME  Elongation factor 2 (EF-2)                   404   e-112
sp|Q6BJ25|EF2_DEBHA  Elongation factor 2 (EF-2)                   358   1e-98
sp|O23755|EF2_BETVU  Elongation factor 2 (EF-2)                   355   9e-98
>sp|Q90705|EF2_CHICK Elongation factor 2 (EF-2)
          Length = 858

 Score =  424 bits (1091), Expect = e-118
 Identities = 194/279 (69%), Positives = 230/279 (82%)
 Frame = +1

Query: 1    RISIKDKHV*VCLSKSPNKHNRLYMTATPMSEELSSDIDAGKITARSEIKERGRYLVETY 180
            R ++ ++   +CLSKSPNKHNRLYM A P  + L+ DID G+++AR E+K+R RYL E Y
Sbjct: 580  RETVSEESNVMCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQRARYLAEKY 639

Query: 181  DWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAAFNWATKDGVLCEENMRG 360
            +WDVTE+RKIWCFGPDG GPN++ D++KGVQYLNEIKDSVVA F WATK+GVLCEENMRG
Sbjct: 640  EWDVTEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKEGVLCEENMRG 699

Query: 361  VRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETALGGI 540
            VRF++HDVTLHADAIHRGGGQIIPTARRC YA VLTA P L+EP+Y  EIQ PE  +GGI
Sbjct: 700  VRFDVHDVTLHADAIHRGGGQIIPTARRCLYACVLTAQPRLMEPIYLVEIQCPEQVVGGI 759

Query: 541  YSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQL 720
            Y  LN++RG +F E QVAGTP +VVKAYLPVNESF FT++LR+ TGGQAFPQCVFDHWQ+
Sbjct: 760  YGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQI 819

Query: 721  FPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 837
             PG+P D  S+P   V +TRKRKGL E +P LD FLDKL
Sbjct: 820  LPGDPFDSASRPSQVVAETRKRKGLKEGIPALDNFLDKL 858
>sp|P13639|EF2_HUMAN Elongation factor 2 (EF-2)
          Length = 858

 Score =  422 bits (1085), Expect = e-118
 Identities = 193/279 (69%), Positives = 229/279 (82%)
 Frame = +1

Query: 1    RISIKDKHV*VCLSKSPNKHNRLYMTATPMSEELSSDIDAGKITARSEIKERGRYLVETY 180
            R ++ ++   +CLSKSPNKHNRLYM A P  + L+ DID G+++AR E+K+R RYL E Y
Sbjct: 580  RETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQRARYLAEKY 639

Query: 181  DWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAAFNWATKDGVLCEENMRG 360
            +WDV E+RKIWCFGPDG GPN++ D++KGVQYLNEIKDSVVA F WATK+G LCEENMRG
Sbjct: 640  EWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRG 699

Query: 361  VRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETALGGI 540
            VRF++HDVTLHADAIHRGGGQIIPTARRC YASVLTA P L+EP+Y  EIQ PE  +GGI
Sbjct: 700  VRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGI 759

Query: 541  YSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQL 720
            Y  LN++RG +F E QVAGTP +VVKAYLPVNESF FT++LR+ TGGQAFPQCVFDHWQ+
Sbjct: 760  YGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQI 819

Query: 721  FPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 837
             PG+P D  S+P   V +TRKRKGL E +P LD FLDKL
Sbjct: 820  LPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLDKL 858
>sp|P58252|EF2_MOUSE Elongation factor 2 (EF-2)
          Length = 858

 Score =  421 bits (1082), Expect = e-117
 Identities = 193/279 (69%), Positives = 228/279 (81%)
 Frame = +1

Query: 1    RISIKDKHV*VCLSKSPNKHNRLYMTATPMSEELSSDIDAGKITARSEIKERGRYLVETY 180
            R ++ ++   +CLSKSPNKHNRLYM A P  + L+ DID G+++AR E+K R RYL E Y
Sbjct: 580  RETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKARARYLAEKY 639

Query: 181  DWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAAFNWATKDGVLCEENMRG 360
            +WDV E+RKIWCFGPDG GPN++ D++KGVQYLNEIKDSVVA F WATK+G LCEENMRG
Sbjct: 640  EWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRG 699

Query: 361  VRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETALGGI 540
            VRF++HDVTLHADAIHRGGGQIIPTARRC YASVLTA P L+EP+Y  EIQ PE  +GGI
Sbjct: 700  VRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGI 759

Query: 541  YSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQL 720
            Y  LN++RG +F E QVAGTP +VVKAYLPVNESF FT++LR+ TGGQAFPQCVFDHWQ+
Sbjct: 760  YGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQI 819

Query: 721  FPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 837
             PG+P D  S+P   V +TRKRKGL E +P LD FLDKL
Sbjct: 820  LPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLDKL 858
>sp|P05086|EF2_MESAU Elongation factor 2 (EF-2)
          Length = 858

 Score =  421 bits (1082), Expect = e-117
 Identities = 193/279 (69%), Positives = 228/279 (81%)
 Frame = +1

Query: 1    RISIKDKHV*VCLSKSPNKHNRLYMTATPMSEELSSDIDAGKITARSEIKERGRYLVETY 180
            R ++ ++   +CLSKSPNKHNRLYM A P  + L+ DID G+++AR E+K R RYL E Y
Sbjct: 580  RETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKARARYLAEKY 639

Query: 181  DWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAAFNWATKDGVLCEENMRG 360
            +WDV E+RKIWCFGPDG GPN++ D++KGVQYLNEIKDSVVA F WATK+G LCEENMRG
Sbjct: 640  EWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRG 699

Query: 361  VRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETALGGI 540
            VRF++HDVTLHADAIHRGGGQIIPTARRC YASVLTA P L+EP+Y  EIQ PE  +GGI
Sbjct: 700  VRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGI 759

Query: 541  YSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQL 720
            Y  LN++RG +F E QVAGTP +VVKAYLPVNESF FT++LR+ TGGQAFPQCVFDHWQ+
Sbjct: 760  YGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQI 819

Query: 721  FPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 837
             PG+P D  S+P   V +TRKRKGL E +P LD FLDKL
Sbjct: 820  LPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLDKL 858
>sp|P05197|EF2_RAT Elongation factor 2 (EF-2)
          Length = 858

 Score =  421 bits (1082), Expect = e-117
 Identities = 193/279 (69%), Positives = 228/279 (81%)
 Frame = +1

Query: 1    RISIKDKHV*VCLSKSPNKHNRLYMTATPMSEELSSDIDAGKITARSEIKERGRYLVETY 180
            R ++ ++   +CLSKSPNKHNRLYM A P  + L+ DID G+++AR E+K R RYL E Y
Sbjct: 580  RETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKARARYLAEKY 639

Query: 181  DWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAAFNWATKDGVLCEENMRG 360
            +WDV E+RKIWCFGPDG GPN++ D++KGVQYLNEIKDSVVA F WATK+G LCEENMRG
Sbjct: 640  EWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRG 699

Query: 361  VRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETALGGI 540
            VRF++HDVTLHADAIHRGGGQIIPTARRC YASVLTA P L+EP+Y  EIQ PE  +GGI
Sbjct: 700  VRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGI 759

Query: 541  YSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQL 720
            Y  LN++RG +F E QVAGTP +VVKAYLPVNESF FT++LR+ TGGQAFPQCVFDHWQ+
Sbjct: 760  YGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQI 819

Query: 721  FPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 837
             PG+P D  S+P   V +TRKRKGL E +P LD FLDKL
Sbjct: 820  LPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLDKL 858
>sp|P09445|EF2_CRIGR Elongation factor 2 (EF-2)
          Length = 858

 Score =  414 bits (1065), Expect = e-115
 Identities = 191/279 (68%), Positives = 226/279 (81%)
 Frame = +1

Query: 1    RISIKDKHV*VCLSKSPNKHNRLYMTATPMSEELSSDIDAGKITARSEIKERGRYLVETY 180
            R ++ ++   +CLSKSPNKHNRLYM A P  + L+ DID G+++AR E+K R RYL E Y
Sbjct: 580  RETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKARARYLAEKY 639

Query: 181  DWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAAFNWATKDGVLCEENMRG 360
            +WDV E+RKIWCFGPDG GPN++ D++KGVQYLNEIKDSVVA F WATK+G LCEENMRG
Sbjct: 640  EWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRG 699

Query: 361  VRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETALGGI 540
            VRF++HDVTLHADAIHR GGQIIPTARRC YASVLTA P L+EP+Y  EIQ PE  +GGI
Sbjct: 700  VRFDVHDVTLHADAIHRRGGQIIPTARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGI 759

Query: 541  YSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQL 720
            Y  LN++RG +F E QVAGTP +VVKAYLPVNESF FT++LR+ TGGQAFPQCVFDHWQ+
Sbjct: 760  YGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQI 819

Query: 721  FPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 837
             PG+P D  S+    V +TRKRKGL E +P LD FLDKL
Sbjct: 820  LPGDPFDNSSRGSQVVAETRKRKGLKEGIPALDNFLDKL 858
>sp|P29691|EF2_CAEEL Elongation factor 2 (EF-2)
          Length = 852

 Score =  411 bits (1056), Expect = e-114
 Identities = 193/269 (71%), Positives = 223/269 (82%)
 Frame = +1

Query: 31   VCLSKSPNKHNRLYMTATPMSEELSSDIDAGKITARSEIKERGRYLVETYDWDVTESRKI 210
            +CLSKSPNKHNRL+ TA PM + L+ DI+ G + AR E K R + L E Y++DVTE+RKI
Sbjct: 584  ICLSKSPNKHNRLHCTAQPMPDGLADDIEGGTVNARDEFKARAKILAEKYEYDVTEARKI 643

Query: 211  WCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAAFNWATKDGVLCEENMRGVRFNIHDVTL 390
            WCFGPDG GPNL++DV+KGVQYLNEIKDSVVA F WAT++GVL +ENMRGVRFN+HDVTL
Sbjct: 644  WCFGPDGTGPNLLMDVTKGVQYLNEIKDSVVAGFQWATREGVLSDENMRGVRFNVHDVTL 703

Query: 391  HADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGI 570
            HADAIHRGGGQIIPTARR FYASVLTA P LLEPVY  EIQ PE A+GGIY  LN+RRG 
Sbjct: 704  HADAIHRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGH 763

Query: 571  IFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLS 750
            +F E QV GTP +VVKAYLPVNESF FT++LR+ TGGQAFPQCVFDHWQ+ PG+PL+  +
Sbjct: 764  VFEESQVTGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGT 823

Query: 751  KPGITVKDTRKRKGLSEDVPLLDKFLDKL 837
            KP   V DTRKRKGL E VP LD +LDK+
Sbjct: 824  KPNQIVLDTRKRKGLKEGVPALDNYLDKM 852
>sp|P13060|EF2_DROME Elongation factor 2 (EF-2)
          Length = 844

 Score =  404 bits (1039), Expect = e-112
 Identities = 188/279 (67%), Positives = 225/279 (80%)
 Frame = +1

Query: 1    RISIKDKHV*VCLSKSPNKHNRLYMTATPMSEELSSDIDAGKITARSEIKERGRYLVETY 180
            R ++ ++   +CLSKSPNKHNRL M A PM + L  DID G ++A+ E K R RYL E Y
Sbjct: 566  RETVSEESDQMCLSKSPNKHNRLLMKALPMPDGLPEDIDNGDVSAKDEFKARARYLSEKY 625

Query: 181  DWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAAFNWATKDGVLCEENMRG 360
            D+DVTE+RKIWCFGPDG GPN ++D +K VQYLNEIKDSVVA F WA+K+G+L +EN+RG
Sbjct: 626  DYDVTEARKIWCFGPDGTGPNFILDCTKSVQYLNEIKDSVVAGFQWASKEGILADENLRG 685

Query: 361  VRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETALGGI 540
            VRFNI+DVTLHADAIHRGGGQIIPT RRC YA+ +TA P L+EPVY CEIQ PE A+GGI
Sbjct: 686  VRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAAAITAKPRLMEPVYLCEIQCPEVAVGGI 745

Query: 541  YSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQL 720
            Y  LN+RRG +F E QV GTP +VVKAYLPVNESF FT++LR+ TGGQAFPQCVFDHWQ+
Sbjct: 746  YGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQV 805

Query: 721  FPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 837
             PG+P +P SKP   V+DTRKRKGL E +P L ++LDKL
Sbjct: 806  LPGDPSEPSSKPYAIVQDTRKRKGLKEGLPDLSQYLDKL 844
>sp|Q6BJ25|EF2_DEBHA Elongation factor 2 (EF-2)
          Length = 842

 Score =  358 bits (918), Expect = 1e-98
 Identities = 173/269 (64%), Positives = 204/269 (75%)
 Frame = +1

Query: 31   VCLSKSPNKHNRLYMTATPMSEELSSDIDAGKITARSEIKERGRYLVETYDWDVTESRKI 210
            V LSKSPNKHNR+Y+ A P+ EE+S DI+ G I  R + K R R L + + WDVT++RKI
Sbjct: 574  VALSKSPNKHNRIYVKAQPIDEEVSLDIEKGVINPRDDFKARARILADNHGWDVTDARKI 633

Query: 211  WCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAAFNWATKDGVLCEENMRGVRFNIHDVTL 390
            WCFGPDGNGPNLVVD +K VQYLNEIKDSVVAAF WATK+G +  EN+R VR NI DVTL
Sbjct: 634  WCFGPDGNGPNLVVDQTKAVQYLNEIKDSVVAAFQWATKEGPIFGENVRSVRVNILDVTL 693

Query: 391  HADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGI 570
            HADAIHRGGGQIIPT RR  YAS+L A P + EPV+  EIQ PE A+GGIYS LNK+RG 
Sbjct: 694  HADAIHRGGGQIIPTMRRVTYASMLLAEPAIQEPVFLVEIQCPENAIGGIYSVLNKKRGQ 753

Query: 571  IFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLS 750
            + SE Q  GTP + VKAYLPVNESF F+ ELR  TGGQAFPQ +FDHW    G+P DP S
Sbjct: 754  VISEEQRPGTPLFTVKAYLPVNESFGFSGELRQSTGGQAFPQLIFDHWANLNGDPTDPTS 813

Query: 751  KPGITVKDTRKRKGLSEDVPLLDKFLDKL 837
            K G  VK+ R+R+G+  DVP  +++ DKL
Sbjct: 814  KVGTIVKEKRERQGMKPDVPGYEEYYDKL 842
>sp|O23755|EF2_BETVU Elongation factor 2 (EF-2)
          Length = 843

 Score =  355 bits (911), Expect = 9e-98
 Identities = 175/279 (62%), Positives = 204/279 (73%)
 Frame = +1

Query: 1    RISIKDKHV*VCLSKSPNKHNRLYMTATPMSEELSSDIDAGKITARSEIKERGRYLVETY 180
            R ++ D+ V   +SKSPNKHNRLYM A PM E L+  ID G+I  R + K R + L E Y
Sbjct: 565  RETVLDRSVRTVMSKSPNKHNRLYMEARPMEEGLAEAIDEGRIGPRDDPKNRSKILAEEY 624

Query: 181  DWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAAFNWATKDGVLCEENMRG 360
             WD   ++KIWCFGP+  GPN+VVD+ KGVQYLNEIKDSVVA F WA+K+G L EENMRG
Sbjct: 625  GWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRG 684

Query: 361  VRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEIQGPETALGGI 540
            + F + DV LH DAIHRGGGQIIPTARR FYAS LTA P LLEPVY  EIQ PE ALGGI
Sbjct: 685  ICFEVCDVVLHTDAIHRGGGQIIPTARRVFYASQLTAKPRLLEPVYLVEIQAPENALGGI 744

Query: 541  YSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQL 720
            YS LN++RG +F EMQ  GTP Y +KAYLPV ESF F+S LRA T GQAFPQCVFDHW++
Sbjct: 745  YSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRASTSGQAFPQCVFDHWEM 804

Query: 721  FPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 837
             P +PL+  S+    V   RKRKGL E +  L +F DKL
Sbjct: 805  MPSDPLEAGSQASTLVSVIRKRKGLKEQMTPLSEFEDKL 843
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,023,283
Number of Sequences: 369166
Number of extensions: 2201738
Number of successful extensions: 5751
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5591
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8534739105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)