Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_006_B10
(368 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9GP32|ALF_ECHMU Fructose-bisphosphate aldolase 132 2e-31
sp|P53442|ALF_SCHMA Fructose-bisphosphate aldolase 132 3e-31
sp|P53445|ALF1_LAMJA Fructose-bisphosphate aldolase, muscle... 112 3e-25
sp|P54216|ALF1_CAEEL Fructose-bisphosphate aldolase 1 (Aldo... 108 5e-24
sp|P46563|ALF2_CAEEL Fructose-bisphosphate aldolase 2 (Aldo... 104 6e-23
sp|P07764|ALF_DROME Fructose-bisphosphate aldolase 100 1e-21
sp|P53448|ALDOC_CARAU Fructose-bisphosphate aldolase C (Bra... 100 2e-21
sp|P05064|ALDOA_MOUSE Fructose-bisphosphate aldolase A (Mus... 97 9e-21
sp|P05065|ALDOA_RAT Fructose-bisphosphate aldolase A (Muscl... 97 9e-21
sp|P04075|ALDOA_HUMAN Fructose-bisphosphate aldolase A (Mus... 97 1e-20
>sp|Q9GP32|ALF_ECHMU Fructose-bisphosphate aldolase
Length = 363
Score = 132 bits (332), Expect = 2e-31
Identities = 64/85 (75%), Positives = 72/85 (84%)
Frame = +1
Query: 1 DATINLNAINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAAQDQLLHLASANGAA 180
DAT NLNAINKY G+KPW L+FSFGRALQAS + AW+GK ENVKA Q + L LA ANGAA
Sbjct: 279 DATRNLNAINKYPGKKPWALSFSFGRALQASAIAAWQGKPENVKAGQAEFLQLAKANGAA 338
Query: 181 AVGKFDGNLKTAAGGKSLFVANHAY 255
++GKF+G LKTAAG KSLFVANHAY
Sbjct: 339 SLGKFEGELKTAAGQKSLFVANHAY 363
>sp|P53442|ALF_SCHMA Fructose-bisphosphate aldolase
Length = 363
Score = 132 bits (331), Expect = 3e-31
Identities = 66/85 (77%), Positives = 70/85 (82%)
Frame = +1
Query: 1 DATINLNAINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAAQDQLLHLASANGAA 180
DAT NLN INK G KPW LTFSFGRALQASVL WKGKKENV AAQ++LL LA ANGAA
Sbjct: 279 DATKNLNEINKIPGPKPWALTFSFGRALQASVLATWKGKKENVHAAQEELLKLAKANGAA 338
Query: 181 AVGKFDGNLKTAAGGKSLFVANHAY 255
AVGKF+GN+ T G KSLFVANHAY
Sbjct: 339 AVGKFEGNMGTTLGDKSLFVANHAY 363
>sp|P53445|ALF1_LAMJA Fructose-bisphosphate aldolase, muscle type
Length = 363
Score = 112 bits (280), Expect = 3e-25
Identities = 56/85 (65%), Positives = 67/85 (78%)
Frame = +1
Query: 1 DATINLNAINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAAQDQLLHLASANGAA 180
DA+I+LNAINK H KPW LTFS+GRALQASVL+AW GKKEN+KAAQD+L+ A NG A
Sbjct: 279 DASIHLNAINKLHLIKPWALTFSYGRALQASVLKAWGGKKENLKAAQDELMRRAKINGQA 338
Query: 181 AVGKFDGNLKTAAGGKSLFVANHAY 255
+ G++ AA G+SLFVANHAY
Sbjct: 339 SKGEYKPTGTGAAAGESLFVANHAY 363
>sp|P54216|ALF1_CAEEL Fructose-bisphosphate aldolase 1 (Aldolase CE-1) (CE1)
Length = 366
Score = 108 bits (269), Expect = 5e-24
Identities = 53/86 (61%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 DATINLNAINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAAQDQLLHLASANGAA 180
DAT+NLNAIN+ G+KPW LTFS+GRALQAS L W GK EN+ AAQ+ LLH A N A
Sbjct: 281 DATLNLNAINQVSGKKPWALTFSYGRALQASCLAKWAGKDENIAAAQEVLLHRAQVNSLA 340
Query: 181 AVGKFDGNLKT-AAGGKSLFVANHAY 255
+VGK+ G+ AA +SLFVANH+Y
Sbjct: 341 SVGKYTGDASADAAASQSLFVANHSY 366
>sp|P46563|ALF2_CAEEL Fructose-bisphosphate aldolase 2 (Aldolase CE-2) (CE2)
Length = 366
Score = 104 bits (260), Expect = 6e-23
Identities = 52/85 (61%), Positives = 61/85 (71%)
Frame = +1
Query: 1 DATINLNAINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAAQDQLLHLASANGAA 180
DAT NLNAIN KPW LTFS+GRALQASVL+AW GK EN+ AAQ LLH + ANG A
Sbjct: 282 DATANLNAINSVQLGKPWKLTFSYGRALQASVLKAWGGKDENIAAAQKTLLHRSKANGDA 341
Query: 181 AVGKFDGNLKTAAGGKSLFVANHAY 255
++GK+ G A +SLFVA H+Y
Sbjct: 342 SLGKYAGEDAAGAAAESLFVAKHSY 366
>sp|P07764|ALF_DROME Fructose-bisphosphate aldolase
Length = 361
Score = 100 bits (248), Expect = 1e-21
Identities = 52/85 (61%), Positives = 61/85 (71%)
Frame = +1
Query: 1 DATINLNAINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAAQDQLLHLASANGAA 180
+AT+NL+AIN +PW LTFS+GRALQASVL AW GKKEN+ A Q++LL A ANG A
Sbjct: 278 EATVNLSAINNVPLIRPWALTFSYGRALQASVLRAWAGKKENIAAGQNELLKRAKANGDA 337
Query: 181 AVGKFDGNLKTAAGGKSLFVANHAY 255
A GK+ AG SLFVANHAY
Sbjct: 338 AQGKYVAG-SAGAGSGSLFVANHAY 361
>sp|P53448|ALDOC_CARAU Fructose-bisphosphate aldolase C (Brain-type aldolase)
Length = 363
Score = 99.8 bits (247), Expect = 2e-21
Identities = 50/85 (58%), Positives = 61/85 (71%)
Frame = +1
Query: 1 DATINLNAINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAAQDQLLHLASANGAA 180
+A+INLNAIN KPW LTFS+GRALQAS L AW+G KEN KAA ++ L A ANG A
Sbjct: 279 EASINLNAINNCPLTKPWALTFSYGRALQASALSAWRGVKENEKAATEEFLKRAEANGLA 338
Query: 181 AVGKFDGNLKTAAGGKSLFVANHAY 255
A GK+ + + G+SL+VANHAY
Sbjct: 339 AQGKYVSSGMDGSAGQSLYVANHAY 363
>sp|P05064|ALDOA_MOUSE Fructose-bisphosphate aldolase A (Muscle-type aldolase) (Aldolase
1)
Length = 364
Score = 97.4 bits (241), Expect = 9e-21
Identities = 50/86 (58%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 DATINLNAINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAAQDQLLHLASANGAA 180
+A+INLNAINK KPW LTFS+GRALQAS L+AW GKKEN+KAAQ++ + A AN A
Sbjct: 279 EASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYIKRALANSLA 338
Query: 181 AVGKFDGNLKT-AAGGKSLFVANHAY 255
GK+ + ++ AA +SLF++NHAY
Sbjct: 339 CQGKYTPSGQSGAAASESLFISNHAY 364
>sp|P05065|ALDOA_RAT Fructose-bisphosphate aldolase A (Muscle-type aldolase)
Length = 364
Score = 97.4 bits (241), Expect = 9e-21
Identities = 50/86 (58%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 DATINLNAINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAAQDQLLHLASANGAA 180
+A+INLNAINK KPW LTFS+GRALQAS L+AW GKKEN+KAAQ++ + A AN A
Sbjct: 279 EASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYIKRALANSLA 338
Query: 181 AVGKFDGNLKT-AAGGKSLFVANHAY 255
GK+ + ++ AA +SLF++NHAY
Sbjct: 339 CQGKYTPSGQSGAAASESLFISNHAY 364
>sp|P04075|ALDOA_HUMAN Fructose-bisphosphate aldolase A (Muscle-type aldolase) (Lung
cancer antigen NY-LU-1)
Length = 364
Score = 97.1 bits (240), Expect = 1e-20
Identities = 51/86 (59%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 DATINLNAINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAAQDQLLHLASANGAA 180
+A+INLNAINK KPW LTFS+GRALQAS L+AW GKKEN+KAAQ++ + A AN A
Sbjct: 279 EASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLA 338
Query: 181 AVGKFDGNLKT-AAGGKSLFVANHAY 255
GK+ + + AA +SLFV+NHAY
Sbjct: 339 CQGKYTPSGQAGAAASESLFVSNHAY 364
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,929,897
Number of Sequences: 369166
Number of extensions: 787815
Number of successful extensions: 2063
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2048
length of database: 68,354,980
effective HSP length: 89
effective length of database: 51,913,565
effective search space used: 1713147645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)